# HG changeset patch
# User qfab
# Date 1401435169 14400
# Node ID 03ab673e45cb557a290f3adbdeb1a02730d56eb9
# Parent  f4d86766f7662247d3df26c1181cb80af802b039
Uploaded

diff -r f4d86766f766 -r 03ab673e45cb collectorcurve/collectorcurve.xml
--- a/collectorcurve/collectorcurve.xml	Fri May 30 03:16:03 2014 -0400
+++ b/collectorcurve/collectorcurve.xml	Fri May 30 03:32:49 2014 -0400
@@ -108,14 +108,6 @@
  <outputs>
   <data format="tabular" name="output" label="${tool.name} on ${on_string}: tab" />
  </outputs>
- <tests>
-  <test>
-    <param name="otu" value="reads2otu.rabund" />
-    <param name="label" value="0.03" />
-    <param name="calc" value="chao-invsimpson-npshannon" />
-    <output name="output" file="collectorsummary.tabular" ftype="tabular" lines_diff="10" />
-  </test>
- </tests>
  <help>
 ===========
 Description
@@ -257,6 +249,14 @@
 
 QFAB Bioinformatics (support@qfab.org)
 based on jjohnson mothur_toolsuite wrapper
-
  </help>
+ <tests>
+  <test>
+    <param name="otu" value="reads2otus.rabund">
+    <param name="label" value="0.3" />
+    <param name="advanced" value="FALSE" />
+    <param name="calc" value="chao,invsimpson,npshannon" />
+    <output name="output" file="output.tabular" ftype="tabular" lines_diff="10" />
+  </test>
+</tests>
 </tool>
diff -r f4d86766f766 -r 03ab673e45cb collectorcurve/test-data/output.tabular
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/collectorcurve/test-data/output.tabular	Fri May 30 03:32:49 2014 -0400
@@ -0,0 +1,2 @@
+label	nseqs	coverage	sobs	chao	chao_lci	chao_hci	invsimpson	invsimpson_lci	invsimpson_hci	npshannon
+0.03	1331.000000	0.711495	536.000000	1761.600000	1422.692820	2230.042544	52.757644	43.823911	66.266396	5.747034
diff -r f4d86766f766 -r 03ab673e45cb collectorcurve/test-data/reads2otus.rabund
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/collectorcurve/test-data/reads2otus.rabund	Fri May 30 03:32:49 2014 -0400
@@ -0,0 +1,1 @@
+0.03	536	60	4	3	8	14	1	1	28	2	1	1	17	6	4	1	1	12	7	1	2	7	5	9	1	154	4	1	2	1	7	1	6	1	1	7	7	19	7	1	17	2	2	2	3	4	2	1	4	2	1	7	3	1	5	1	1	3	1	1	2	1	1	1	1	2	10	1	1	1	3	3	11	4	2	1	1	8	4	1	1	20	6	1	1	6	2	7	2	3	28	4	6	6	2	8	10	1	5	4	1	32	1	2	3	1	1	1	13	1	1	1	1	1	1	1	1	2	4	3	2	2	1	1	1	2	6	1	7	4	1	1	1	7	1	3	1	14	1	2	1	1	7	1	5	1	4	2	1	1	1	2	1	1	1	1	1	1	1	2	1	4	1	1	1	1	1	1	1	3	1	1	4	1	1	3	1	1	3	1	1	4	1	1	1	1	1	4	1	1	1	2	2	7	1	2	1	1	1	1	1	1	1	8	2	1	2	1	1	2	1	1	3	2	2	1	3	1	3	1	1	1	1	2	1	1	5	1	1	1	3	1	3	2	2	1	2	2	1	1	1	2	1	2	1	1	4	1	1	1	1	1	1	1	1	2	2	1	2	5	1	1	1	1	3	1	1	1	1	3	1	1	1	1	1	2	1	4	1	1	4	1	2	1	3	1	1	5	1	1	1	1	1	1	1	4	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	4	1	1	2	1	1	1	1	2	1	2	2	1	1	1	1	2	1	1	1	1	1	1	1	1	1	1	2	1	1	1	1	1	1	7	1	1	1	1	1	1	1	1	1	5	1	1	1	5	2	2	2	1	1	1	1	1	2	1	1	1	1	1	1	1	1	1	1	1	1	1	1	4	1	1	1	1	1	1	1	1	1	1	1	2	1	1	1	1	2	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	2	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	2	1	2	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	2	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1