Mercurial > repos > qfab > collector_curve
changeset 3:b53440004b1c draft
Uploaded
| author | qfab |
|---|---|
| date | Fri, 30 May 2014 03:34:44 -0400 |
| parents | 3e3b28ca608e |
| children | a8f9ab5c18d5 |
| files | collectorcurve/collectorcurve.xml collectorcurve/test-data/collectorsummary.tabular collectorcurve/test-data/reads2otu.rabund |
| diffstat | 3 files changed, 4 insertions(+), 1 deletions(-) [+] |
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--- a/collectorcurve/collectorcurve.xml Fri May 30 03:33:13 2014 -0400 +++ b/collectorcurve/collectorcurve.xml Fri May 30 03:34:44 2014 -0400 @@ -253,7 +253,7 @@ <tests> <test> <param name="otu" value="reads2otus.rabund"> - <param name="label" value="0.3" /> + <param name="label" value="0.03" /> <param name="advanced" value="FALSE" /> <param name="calc" value="chao,invsimpson,npshannon" /> <output name="output" file="output.tabular" ftype="tabular" lines_diff="10" />
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/collectorcurve/test-data/collectorsummary.tabular Fri May 30 03:34:44 2014 -0400 @@ -0,0 +1,2 @@ +label nseqs coverage sobs chao chao_lci chao_hci invsimpson invsimpson_lci invsimpson_hci npshannon +0.03 1339.000000 0.707244 537.000000 1956.185185 1555.232438 2515.022419 39.469114 32.778553 49.591415 5.683962
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/collectorcurve/test-data/reads2otu.rabund Fri May 30 03:34:44 2014 -0400 @@ -0,0 +1,1 @@ +0.03 537 4 13 15 2 1 5 23 1 3 6 1 3 3 1 1 1 1 1 1 2 4 1 20 3 1 17 1 6 4 61 1 6 17 191 7 1 27 1 5 1 2 1 13 1 1 1 1 8 1 7 3 6 1 15 1 1 1 1 1 1 3 1 7 4 1 6 9 1 6 2 2 1 19 2 1 7 1 1 17 1 1 1 4 1 1 1 2 3 1 6 8 8 1 5 4 1 6 1 1 1 2 8 2 1 2 7 2 4 3 5 3 1 1 1 5 5 1 2 1 1 4 1 12 2 1 1 2 2 7 1 1 2 1 1 3 1 1 1 4 4 1 1 7 1 1 4 1 2 3 1 1 1 7 3 1 2 1 1 1 1 1 1 1 1 1 1 12 1 4 1 4 1 1 1 1 1 4 1 1 1 3 1 1 1 4 1 1 2 1 1 6 1 1 3 2 1 2 5 1 2 1 1 1 5 2 1 1 1 1 1 1 1 4 1 1 1 2 1 4 2 1 1 2 2 1 1 2 7 4 1 1 1 2 1 1 1 1 2 1 2 2 1 2 1 1 2 1 1 1 2 2 1 1 1 2 1 1 1 1 2 2 1 4 2 1 1 1 2 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 6 1 1 1 1 1 1 1 1 1 2 3 5 1 1 1 1 1 3 2 3 1 1 1 1 5 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 1 3 1 1 2 3 1 1 6 1 1 1 1 1 1 1 1 1 1 4 4 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1