Galaxy wrappers for PyNAST 
=================================================================================

PyNAST (Python Nearest Alignment Space Termination) is a reimplementation of
the NAST sequence aligner, which has become a popular tool for adding new 16s
rDNA sequences to existing 16s rDNA alignments. This reimplementation is more
flexible, faster, and easier to install and maintain than the original NAST
implementation. 

Installation
=================================================================================

Galaxy will automatically install PyNAST and all its dependencies:
- Package PyCogent v1.5.2
- Package uclust v1.2.22q
- Package NumPy v1.8.1


Disclaimer
=================================================================================

This source code is provided by QFAB Bioinformatics "as is", in the hope that it 
will be useful, and any express or implied warranties, including, but not limited 
to, the implied warranties of merchantability and fitness for a particular purpose 
are disclaimed.
IN NO EVENT SHALL QFAB BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 
EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, 
WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDINGNEGLIGENCE OR OTHERWISE) 
ARISING IN ANY WAY OUT OF THE USE OF THIS SOURCE CODE, EVEN IF ADVISED OF THE 
POSSIBILITY OF SUCH DAMAGE.


License
=================================================================================

This work by QFAB Bioinformatics (as part of the GVL project http://genome.edu.au)
is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0
International License.