Mercurial > repos > recetox > matchms_formatter
diff matchms_formatter.xml @ 32:604131c54f97 draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/matchms commit bd80a813fb2f01f22eed0c874f8911ce4d00762a
author | recetox |
---|---|
date | Mon, 30 Jun 2025 13:01:12 +0000 |
parents | 8bd942dcf1ad |
children |
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--- a/matchms_formatter.xml Thu Nov 14 15:08:43 2024 +0000 +++ b/matchms_formatter.xml Mon Jun 30 13:01:12 2025 +0000 @@ -1,4 +1,4 @@ -<tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy0" profile="21.09"> +<tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy0" profile="23.0" license="MIT"> <description>reformat scores object of matchms to long format table</description> <macros> @@ -13,7 +13,6 @@ <requirements> <requirement type="package" version="@TOOL_VERSION@">matchms</requirement> - <requirement type="package" version="1.1.4">pandas</requirement> </requirements> <command detect_errors="aggressive"><![CDATA[ @@ -50,20 +49,20 @@ <param label="Key" name="key" type="text" value="compound_name" help="Name of the key to use. Default is 'compound_name'." /> </inputs> <outputs> - <data label="${tool.name} on ${on_string}" name="output" format="tsv"/> + <data label="${tool.name} on ${on_string}" name="output" format="tabular"/> </outputs> <tests> <test> <param name="scores" value="formatter/fill2_trunc_scores_with_metadata_match.json" ftype="json"/> <param name="key" value="compound_name"/> - <output name="output" value="formatter/fill2_formatted.tsv" ftype="tsv" + <output name="output" value="formatter/fill2_formatted.tsv" ftype="tabular" checksum="md5$4f0d83da381b8a403d807d26a9dd0f34"/> </test> <test> <param name="scores" value="similarity/scores_test4_out.json" ftype="json"/> <param name="key" value="compound_name"/> - <output name="output" file="formatter/test4_formatted.tsv" ftype="tsv"/> + <output name="output" file="formatter/test4_formatted.tsv" ftype="tabular"/> </test> </tests>