Mercurial > repos > recetox > recetox_aplcms_adjust_time

diff recetox_aplcms_adjust_time.xml @ 1:18eadec69334 draft default tip

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planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit 699355cdf45b2157e9eea3962a01950d469fb0ba
author recetox
date Thu, 16 Jun 2022 10:25:56 +0000
parents e5a53ff3f2ed
children
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--- a/recetox_aplcms_adjust_time.xml	Fri Jun 10 10:16:23 2022 +0000
+++ b/recetox_aplcms_adjust_time.xml	Thu Jun 16 10:25:56 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="recetox_aplcms_adjust_time" name="RECETOX apLCMS - adjust time" version="@TOOL_VERSION@+galaxy0">
+<tool id="recetox_aplcms_adjust_time" name="RECETOX apLCMS - adjust time" version="@TOOL_VERSION@+galaxy1">
     <description>corrects the retention time of features from LC/MS spectra</description>
     <macros>
         <import>macros.xml</import>
@@ -39,8 +39,8 @@
     </configfiles>
 
     <inputs>
-        <param name="files" type="data" format="parquet" multiple="true" min="2" label="Input data"
-               help="Mass spectrometry sample-wise feature tables." />
+        <param name="files" type="data_collection" collection_type="list" format="parquet" label="Input data"
+               help="Mass spectrometry sample-wise feature tables collection." />
         <expand macro="mz_tol_macro"/>
         <expand macro="peak_alignment"/>
     </inputs>
@@ -54,8 +54,13 @@
 
     <tests>
         <test>
-            <param name="files" ftype="parquet"
-                   value="extracted_expected/extracted_0.parquet,extracted_expected/extracted_1.parquet,extracted_expected/extracted_2.parquet"/>
+            <param name="files">
+                <collection type="list">
+                    <element name="extracted_features_0.parquet" value="extracted_expected/extracted_0.parquet"/>
+                    <element name="extracted_features_1.parquet" value="extracted_expected/extracted_1.parquet"/>
+                    <element name="extracted_features_2.parquet" value="extracted_expected/extracted_2.parquet"/>
+                </collection>
+            </param>
             <output_collection name="corrected_feature_tables" type="list">
                 <element name="corrected_features_0.parquet" file="corrected_expected/corrected_0.parquet" ftype="parquet"/>
                 <element name="corrected_features_1.parquet" file="corrected_expected/corrected_1.parquet" ftype="parquet"/>