Mercurial > repos > recetox > recetox_aplcms_recover_weaker_signals
comparison recetox_aplcms_recover_weaker_signals.xml @ 3:c69a12bfc2fb draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit 4254c6f6f05915ceab5af5d7040ac2c44a8364b4
author | recetox |
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date | Mon, 03 Apr 2023 14:57:30 +0000 |
parents | 472dc85ce7c5 |
children | 755ff0afaaff |
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2:472dc85ce7c5 | 3:c69a12bfc2fb |
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43 extracted_features = extracted_features, | 43 extracted_features = extracted_features, |
44 adjusted_features = corrected_features, | 44 adjusted_features = corrected_features, |
45 metadata_table = metadata, | 45 metadata_table = metadata, |
46 rt_table = rt_table, | 46 rt_table = rt_table, |
47 intensity_table = intensity_table, | 47 intensity_table = intensity_table, |
48 mz_tol = $mz_tol, | 48 mz_tol = $mz_tol/1e6, |
49 mz_tol_relative = get_mz_tol(tolerances), | 49 mz_tol_relative = get_mz_tol(tolerances), |
50 rt_tol_relative = get_rt_tol(tolerances), | 50 rt_tol_relative = get_rt_tol(tolerances), |
51 #if $recover_mz_range: | 51 #if $recover_mz_range: |
52 recover_mz_range = $recover_mz_range, | 52 recover_mz_range = $recover_mz_range/1e6, |
53 #else: | 53 #else: |
54 recover_mz_range = NA, | 54 recover_mz_range = NA, |
55 #end if | 55 #end if |
56 #if $recover_rt_range: | 56 #if $recover_rt_range: |
57 recover_rt_range = $recover_rt_range, | 57 recover_rt_range = $recover_rt_range, |