Mercurial > repos > recetox > recetox_aplcms_recover_weaker_signals

diff utils.R @ 5:fd66fc063ce8 draft

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planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/recetox_aplcms commit 505c3374a3e1e9aa450fcb752f2b8f87558fedbb
author recetox
date Thu, 25 May 2023 09:16:12 +0000
parents 755ff0afaaff
children e2cb970d99dd
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line diff
--- a/utils.R	Wed May 24 14:50:25 2023 +0000
+++ b/utils.R	Thu May 25 09:16:12 2023 +0000
@@ -41,9 +41,9 @@
 
 save_parquet_collection <- function(feature_tables, sample_names, subdir) {
     dir.create(subdir)
-    for (i in seq_len(length(feature_tables))) {
-      filename <- file.path(subdir, paste0(subdir, "_", sample_names[i], ".parquet"))
-      feature_table <- as.data.frame(feature_tables[[i]])
+    for (i in seq_len(length(table$feature_tables))) {
+      filename <- file.path(subdir, paste0(sample_names[i], ".parquet"))
+      feature_table <- as.data.frame(table$feature_tables[[i]])
       feature_table <- save_sample_name(feature_table, sample_names[i])
       arrow::write_parquet(feature_table, filename)
     }