Mercurial > repos > recetox > riassigner

comparison riassigner.xml @ 7:984d5fa7acf5 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/riassigner commit 059cad0b3f5f7067d0ca577bfe7e29bfca8af6b5
author recetox
date Thu, 14 Aug 2025 14:01:09 +0000
parents af25aa61c611
children
comparison
equal deleted inserted replaced
6:af25aa61c611 7:984d5fa7acf5
1 <tool id="riassigner" name="RIAssigner" version="@TOOL_VERSION@+galaxy0" profile="21.09"> 1 <tool id="riassigner" name="RIAssigner" version="@TOOL_VERSION@+galaxy1" profile="21.09">
2 <description>compute retention indices</description> 2 <description>compute retention indices</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="creator"/> 6 <expand macro="creator"/>
53 <option value="cubicspline">CubicSpline</option> 53 <option value="cubicspline">CubicSpline</option>
54 </param> 54 </param>
55 </inputs> 55 </inputs>
56 56
57 <outputs> 57 <outputs>
58 <data label="RI using $method of ${query_section.query.element_identifier}" name="output" format="tsv" 58 <data label="${query_section.query.element_identifier} with RI" name="output" format="tsv"
59 metadata_source="query"> 59 metadata_source="query">
60 <change_format> 60 <change_format>
61 <when input="query_section.query.ext" value="msp" format="msp" /> 61 <when input="query_section.query.ext" value="msp" format="msp" />
62 </change_format> 62 </change_format>
63 </data> 63 </data>
64 </outputs> 64 </outputs>
65 65
66 <tests> 66 <tests>
67 <test> 67 <test>
68 <param name="query" value="aplcms_aligned_peaks.csv" ftype="csv"/> 68 <section name="query_section">
69 <param name="query_rt_units" value="seconds"/> 69 <param name="query" value="aplcms_aligned_peaks.csv" ftype="csv"/>
70 <param name="reference" value="Alkanes_20210325.csv" ftype="csv"/> 70 <param name="query_rt_units" value="seconds"/>
71 <param name="reference_rt_units" value="seconds"/> 71 </section>
72 <section name="reference_section">
73 <param name="reference" value="Alkanes_20210325.csv" ftype="csv"/>
74 <param name="reference_rt_units" value="seconds"/>
75 </section>
72 <param name="method" value="kovats"/> 76 <param name="method" value="kovats"/>
73 <output name="output" file="results.tsv" ftype="tsv"/> 77 <output name="output" file="results.tsv" ftype="tsv"/>
74 </test> 78 </test>
75 </tests> 79 </tests>
76 80