Mercurial > repos > recetox > waveica

comparison macros.xml @ 10:821062fc5782 draft default tip

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planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 2b8b1dcb2947c6503fd4f82904df708e4f88ea1d
author recetox
date Fri, 04 Jul 2025 09:43:22 +0000
parents 6fc9f6dbcef5
children
comparison
equal deleted inserted replaced
9:6fc9f6dbcef5 10:821062fc5782
23 <xml name="annotation"> 23 <xml name="annotation">
24 <xrefs> 24 <xrefs>
25 <xref type="bio.tools">waveica</xref> 25 <xref type="bio.tools">waveica</xref>
26 </xrefs> 26 </xrefs>
27 </xml> 27 </xml>
28
29 <xml name="input_data">
30 <param type="data" name="data" label="Feature table" format="csv,tsv,tabular,parquet" help=""/>
31 </xml>
32 28
33 <xml name="wf"> 29 <xml name="wf">
34 <conditional name="wf"> 30 <conditional name="wf">
35 <param type="select" name="wavelet_filter" label="Wavelet transform filter" help="wavelet function and filter length [1] (see footnotes for more details)"> 31 <param type="select" name="wavelet_filter" label="Wavelet transform filter" help="wavelet function and filter length [1] (see footnotes for more details)">
36 <option value="d" selected="True">Daubechies</option> 32 <option value="d" selected="True">Daubechies</option>
79 <option value="30">30</option> 75 <option value="30">30</option>
80 </param> 76 </param>
81 </when> 77 </when>
82 </conditional> 78 </conditional>
83 </xml> 79 </xml>
84 <xml name="split_output">
85 <param name = "keep_two_output" label="Output metadata and data matrix as separate files" type="boolean" checked="false"
86 truevalue="TRUE" falsevalue="FALSE" help="Keep two output files, one being the data matrix (feature table) and the second being the metadata table." />
87 </xml>
88 80
89 <xml name="outputs"> 81 <xml name="outputs">
90 <outputs> 82 <outputs>
91 <data name="normalized_data" format="tabular" label="Normalized table of ${on_string}"> 83 <data name="normalized_data" format="tabular" label="Normalized table of ${on_string}">
92 <change_format> 84 <change_format>
93 <when input_dataset="data" attribute="ext" value="parquet" format="parquet" /> 85 <when input_dataset="data_matrix" attribute="ext" value="parquet" format="parquet" />
94 </change_format> 86 <when input_dataset="data_matrix" attribute="ext" value="csv" format="csv" />
95 </data> 87 <when input_dataset="data_matrix" attribute="ext" value="tsv" format="tsv" />
96 <data name="metadata" format="tabular" label="Metadata table of ${on_string}"> 88 <when input_dataset="data_matrix" attribute="ext" value="tabular" format="tabular" />
97 <filter>keep_two_output</filter>
98 <change_format>
99 <when input_dataset="data" attribute="ext" value="parquet" format="parquet" />
100 </change_format> 89 </change_format>
101 </data> 90 </data>
102 </outputs> 91 </outputs>
103 </xml> 92 </xml>
104 93