Mercurial > repos > recetox > waveica

diff macros.xml @ 7:1a2aeb8137bf draft

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planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit 013d7c85fa9d77b8a27d194b350cd6b2d127a80f
author recetox
date Thu, 06 Jun 2024 12:25:05 +0000
parents 425c0494ec2d
children
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--- a/macros.xml	Thu May 30 14:54:02 2024 +0000
+++ b/macros.xml	Thu Jun 06 12:25:05 2024 +0000
@@ -96,10 +96,20 @@
             </when>
         </conditional>
     </xml>
+    <xml name="split_output">
+        <param name = "keep_two_output" label="Output metadata and data matrix as separate files" type="boolean" checked="false" 
+                truevalue="TRUE" falsevalue="FALSE" help="Keep two output files, one being the data matrix (feature table) and the second being the  metadata table." />
+    </xml>
 
     <xml name="outputs">
         <outputs>
-            <data name="normalized_data" format="tsv">
+            <data name="normalized_data" format="tabular" label="Normalized table of ${on_string}">
+                <change_format>
+                    <when input_dataset="data" attribute="ext" value="parquet" format="parquet" />
+                </change_format>
+            </data>
+            <data name="metadata" format="tabular" label="Metadata table of ${on_string}">
+                <filter>keep_two_output</filter>
                 <change_format>
                     <when input_dataset="data" attribute="ext" value="parquet" format="parquet" />
                 </change_format>