Mercurial > repos > rmarenco > hubarchivecreator

comparison test-data/psl/__main__.log @ 29:7e8a8b732db3 draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 1a81ebd0ddea950b84af3fc830e9267a4814b29f
author yating-l
date Wed, 16 May 2018 18:04:20 -0400
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28:6aa28a85cc38 29:7e8a8b732db3
1 DEBUG:root:#### Welcome in HubArchiveCreator Debug Mode ####
2
3 DEBUG:root:Calling faToTwoBit:
4 DEBUG:root:---------
5 DEBUG:root:
6 DEBUG:root:Calling twoBitInfo:
7 DEBUG:root:---------
8 DEBUG:root:
9 DEBUG:root:Calling sort:
10 DEBUG:root:---------
11 DEBUG:root:
12 DEBUG:root:input_false_path: /home/galaxy/galaxy/database/datasets/000/dataset_191.dat
13 DEBUG:root:data_value: {u'long_label': u'BLAST Alignment', u'name': u'blastXmlToPsl', u'database': u'', u'track_color': u'#000000', u'group_name': u'Default group', u'order_index': u'10'}
14 DEBUG:root:Calling pslToBigPsl:
15 DEBUG:root:---------
16 DEBUG:root:
17 DEBUG:root:Calling sort:
18 DEBUG:root:---------
19 DEBUG:root:
20 DEBUG:root:Hello
21 DEBUG:root:sorted_bed_file_name: /tmp/tmp2i4e0Tpsl
22 DEBUG:root:chrom_sizes_file_name: /tmp/tmp1BIsqk.chrom.sizes
23 DEBUG:root:big_bed_file_name: /home/galaxy/galaxy/database/jobs/000/166/dataset_192_files/myHub/Dbia3/tracks/blastXmlToPsl.bb
24 DEBUG:root:typeOption: bed12+12
25 DEBUG:root:autoSql: /home/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/rmarenco/hubarchivecreator/6aa28a85cc38/hubarchivecreator/bigPsl.as
26 DEBUG:root:tab option: True
27 DEBUG:root:Calling bedToBigBed:
28 DEBUG:root:---------
29 DEBUG:root:
30 DEBUG:root:----- End of all_datatype_dictionary processing -----
31 DEBUG:root:all_datatype_ordered_dictionary keys are: [<Psl.Psl object at 0x7fc17d9d0690>]
32 DEBUG:root:----- Beginning of Track adding processing -----
33 DEBUG:root:We just added in /home/galaxy/galaxy/database/jobs/000/166/dataset_192_files/myHub/Dbia3/groups.txt the group Default group
34 DEBUG:root:We just added track gonramp_blastXmlToPsl_bb (in group default_group)
35 DEBUG:root:----- End of Track adding processing -----
36 DEBUG:root:#### End of HubArchiveCreator Debug Mode: Bye! ####