Mercurial > repos > rmarenco > hubarchivecreator

comparison tool_dependencies.xml @ 2:df9e12da0d13 draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 64cfc08088d11f6818c1b4e5514ef9e67969eaff-dirty
author rmarenco
date Thu, 14 Jul 2016 12:49:51 -0400
parents fb5e60d4d18a
children cbd8982c9f51
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1:fb5e60d4d18a 2:df9e12da0d13
26 <!-- Package gff3ToGenePred --> 26 <!-- Package gff3ToGenePred -->
27 <package name="gff3ToGenePred" version="0.0.1"> 27 <package name="gff3ToGenePred" version="0.0.1">
28 <install version="1.0"> 28 <install version="1.0">
29 <actions> 29 <actions>
30 <action target_directory="bin" type="download_binary"> 30 <action target_directory="bin" type="download_binary">
31 <url_template os="darwin"> 31 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/gff3ToGenePred</url_template>
32 http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/gff3ToGenePred 32 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/gff3ToGenePred</url_template>
33 </url_template>
34 <url_template os="linux">
35 http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/gff3ToGenePred
36 </url_template>
37 </action> 33 </action>
38 <action type="chmod"> 34 <action type="chmod">
39 <file mode="750">$INSTALL_DIR/bin/gff3ToGenePred</file> 35 <file mode="750">$INSTALL_DIR/bin/gff3ToGenePred</file>
40 </action> 36 </action>
41 <action type="set_environment"> 37 <action type="set_environment">
49 <!-- Package gtfToGenePred --> 45 <!-- Package gtfToGenePred -->
50 <package name="gtfToGenePred" version="0.0.1"> 46 <package name="gtfToGenePred" version="0.0.1">
51 <install version="1.0"> 47 <install version="1.0">
52 <actions> 48 <actions>
53 <action target_directory="bin" type="download_binary"> 49 <action target_directory="bin" type="download_binary">
54 <url_template os="darwin"> 50 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/gtfToGenePred</url_template>
55 http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/gtfToGenePred 51 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/gtfToGenePred</url_template>
56 </url_template>
57 <url_template os="linux">
58 http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/gtfToGenePred
59 </url_template>
60 </action> 52 </action>
61 <action type="chmod"> 53 <action type="chmod">
62 <file mode="750">$INSTALL_DIR/bin/gtfToGenePred</file> 54 <file mode="750">$INSTALL_DIR/bin/gtfToGenePred</file>
63 </action> 55 </action>
64 <action type="set_environment"> 56 <action type="set_environment">
72 <!-- Package genePredToBed --> 64 <!-- Package genePredToBed -->
73 <package name="genePredToBed" version="0.0.1"> 65 <package name="genePredToBed" version="0.0.1">
74 <install version="1.0"> 66 <install version="1.0">
75 <actions> 67 <actions>
76 <action target_directory="bin" type="download_binary"> 68 <action target_directory="bin" type="download_binary">
77 <url_template os="darwin"> 69 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/genePredToBed</url_template>
78 http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/genePredToBed 70 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/genePredToBed</url_template>
79 </url_template>
80 <url_template os="linux">
81 http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/genePredToBed
82 </url_template>
83 </action> 71 </action>
84 <action type="chmod"> 72 <action type="chmod">
85 <file mode="750">$INSTALL_DIR/bin/genePredToBed</file> 73 <file mode="750">$INSTALL_DIR/bin/genePredToBed</file>
86 </action> 74 </action>
87 <action type="set_environment"> 75 <action type="set_environment">