Mercurial > repos > rmarenco > hubarchivecreator

comparison templates/trackDb/layout.txt @ 24:fcc1021bd496 draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 93e2e2fb59f99677425104a80c17f665fa7b2b4a-dirty
author yating-l
date Wed, 31 May 2017 11:35:16 -0400
parents c02720d1afee
children df42241d3731
comparison
equal deleted inserted replaced
23:2677f1899aa8 24:fcc1021bd496
1 % for trackDb in trackDbs: 1 % for trackDb in trackDbs:
2 ## See this http://genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html 2 % if "bigWig" in trackDb.trackType:
3 track ${trackDb.trackName}
4 longLabel ${trackDb.longLabel}
5 shortLabel ${trackDb.shortLabel}
6 bigDataUrl ${trackDb.trackDataURL}
7 type ${trackDb.trackType}
8 visibility ${trackDb.visibility}
9 thickDrawItem ${trackDb.thickDrawItem}
10 priority ${trackDb.priority}
11 color ${trackDb.track_color}
12 group ${trackDb.group_name.lower().replace(' ', '_')}
13 3
4 track ${trackDb.trackName}
5 longLabel ${trackDb.longLabel}
6 shortLabel ${trackDb.shortLabel}
7 bigDataUrl ${trackDb.trackDataURL}
8 visibility ${trackDb.visibility}
9 priority ${trackDb.priority}
10 color ${trackDb.track_color}
11 group ${trackDb.group_name.lower().replace(' ', '_')}
12 type ${trackDb.trackType}
13 autoScale on
14 maxHeightPixels 100:32:8
15 windowingFunction mean+whiskers
16
17 % else:
18
19 ## See this http://genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html
20 track ${trackDb.trackName}
21 longLabel ${trackDb.longLabel}
22 shortLabel ${trackDb.shortLabel}
23 bigDataUrl ${trackDb.trackDataURL}
24 type ${trackDb.trackType}
25 visibility ${trackDb.visibility}
26 thickDrawItem ${trackDb.thickDrawItem}
27 priority ${trackDb.priority}
28 color ${trackDb.track_color}
29 group ${trackDb.group_name.lower().replace(' ', '_')}
30
31 % endif
14 % endfor 32 % endfor