Mercurial > repos > rmarenco > hubarchivecreator
diff Gtf.py @ 23:2677f1899aa8 draft
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 07210e24fe7d22f5dfc84061310280f67f781fb1-dirty
| author | yating-l |
|---|---|
| date | Tue, 09 May 2017 15:42:43 -0400 |
| parents | 0152500d9acd |
| children | df42241d3731 |
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--- a/Gtf.py Wed Apr 12 17:03:51 2017 -0400 +++ b/Gtf.py Tue May 09 15:42:43 2017 -0400 @@ -28,7 +28,10 @@ self.track_color = data_gtf["track_color"] # TODO: Think about how to avoid repetition of the group_name everywhere self.group_name = data_gtf["group_name"] - + if data_gtf["long_label"]: + self.long_label = data_gtf["long_label"] + else: + self.long_label = self.name_gtf #print "Creating TrackHub GTF from (falsePath: %s; name: %s)" % ( self.input_gtf_false_path, self.name_gtf) # TODO: See if we need these temporary files as part of the generated files @@ -69,7 +72,7 @@ # Create the Track Object self.createTrack(file_path=trackName, track_name=trackName, - long_label=self.name_gtf, track_type='bigGenePred', + long_label=self.long_label, track_type='bigGenePred', visibility='dense', priority=self.priority, track_file=myBigBedFilePath, track_color=self.track_color,