Mercurial > repos > rmarenco > hubarchivecreator
diff test-data/bed_simple_repeats/__main__.log @ 29:7e8a8b732db3 draft
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 1a81ebd0ddea950b84af3fc830e9267a4814b29f
| author | yating-l |
|---|---|
| date | Wed, 16 May 2018 18:04:20 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/bed_simple_repeats/__main__.log Wed May 16 18:04:20 2018 -0400 @@ -0,0 +1,32 @@ +DEBUG:root:#### Welcome in HubArchiveCreator Debug Mode #### + +DEBUG:root:Calling faToTwoBit: +DEBUG:root:--------- +DEBUG:root: +DEBUG:root:Calling twoBitInfo: +DEBUG:root:--------- +DEBUG:root: +DEBUG:root:Calling sort: +DEBUG:root:--------- +DEBUG:root: +DEBUG:root:input_false_path: /home/galaxy/galaxy/database/datasets/000/dataset_146.dat +DEBUG:root:data_value: {u'long_label': u'Simple repeat', u'name': u'TrfBig_on_data_1', u'database': u'', u'track_color': u'#f79646', u'group_name': u'Simple repeats', u'order_index': u'10'} +DEBUG:root:Calling sort: +DEBUG:root:--------- +DEBUG:root: +DEBUG:root:sorted_bed_file_name: /tmp/tmptOTxHF.sortedBed +DEBUG:root:chrom_sizes_file_name: /tmp/tmpr8MCAz.chrom.sizes +DEBUG:root:big_bed_file_name: /home/galaxy/galaxy/database/jobs/000/142/dataset_169_files/myHub/Dbia3/tracks/TrfBig_on_data_1.bb +DEBUG:root:typeOption: bed4+12 +DEBUG:root:autoSql: /home/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/rmarenco/hubarchivecreator/6aa28a85cc38/hubarchivecreator/trf_simpleRepeat.as +DEBUG:root:tab option: False +DEBUG:root:Calling bedToBigBed: +DEBUG:root:--------- +DEBUG:root: +DEBUG:root:----- End of all_datatype_dictionary processing ----- +DEBUG:root:all_datatype_ordered_dictionary keys are: [<BedSimpleRepeats.BedSimpleRepeats object at 0x7f4713fe8690>] +DEBUG:root:----- Beginning of Track adding processing ----- +DEBUG:root:We just added in /home/galaxy/galaxy/database/jobs/000/142/dataset_169_files/myHub/Dbia3/groups.txt the group Simple repeats +DEBUG:root:We just added track gonramp_TrfBig_on_data_1_bb (in group simple_repeats) +DEBUG:root:----- End of Track adding processing ----- +DEBUG:root:#### End of HubArchiveCreator Debug Mode: Bye! ####