Mercurial > repos > rmarenco > hubarchivecreator

diff BedSimpleRepeats.py @ 17:c02720d1afee draft
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 1adbf397de1fc7af4d91e026093d7fff983e21cf
author: rmarenco
date: Fri, 30 Sep 2016 15:14:24 -0400
parents: 3233451a3bd6
children: 2677f1899aa8
--- a/BedSimpleRepeats.py	Sun Sep 25 11:25:38 2016 -0400
+++ b/BedSimpleRepeats.py	Fri Sep 30 15:14:24 2016 -0400
@@ -18,6 +18,8 @@
         self.name_bed_simple_repeats = data_bed_simple_repeats["name"]
         self.priority = data_bed_simple_repeats["order_index"]
         self.track_color = data_bed_simple_repeats["track_color"]
+        # TODO: Think about how to avoid repetition of the group_name everywhere
+        self.group_name = data_bed_simple_repeats["group_name"]
 
         sortedBedFile = tempfile.NamedTemporaryFile(suffix=".sortedBed")
 
@@ -44,7 +46,8 @@
                          long_label=self.name_bed_simple_repeats, track_type='bigBed 4 +', visibility='dense',
                          priority=self.priority,
                          track_file=myBigBedFilePath,
-                         track_color=self.track_color)
+                         track_color=self.track_color,
+                         group_name=self.group_name)
 
         # dataURL = "tracks/%s" % trackName
         #