Mercurial > repos > rmarenco > hubarchivecreator

view tool_dependencies.xml @ 30:e7c4be523cb7 draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 2f1b3cc8c9cb463e460f7f79efe99ed472700ecf
author yating-l
date Tue, 19 Jun 2018 13:02:32 -0400
parents 7e8a8b732db3
children
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<?xml version="1.0"?>
<tool_dependency>
    <!-- Useful for HAC are:
        - twoBitInfo
        - sort
        - bedToBigBed
        - gff3ToGenePred
        - gtfToGenePred
        - genePredToBed
        - genePredToBigGenePred
        - faToTwoBit
        - samtools
        - pslToBigPsl
    -->
    <package name="samtools" version="1.2">
        <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="ucsc_hac" version="340">
        <repository changeset_revision="1a15120c22c8" name="package_ucsc_hac_340" owner="yating-l" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="ucsc_bigbed" version="340">
        <repository changeset_revision="e3faf2af4e59" name="package_ucsc_bigbed_340" owner="yating-l" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>

    <package name="ucsc_bigwig" version="340">      
        <repository changeset_revision="5ba6d8812c60" name="package_ucsc_bigwig_340" owner="yating-l" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>

</tool_dependency>