Mercurial > repos > rmarenco > multi_fasta_glimmer_hmm

annotate glimmer_hmm.loc.sample @ 0:0ddb5ee32ff6 draft default tip

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planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
author rmarenco
date Thu, 18 Aug 2016 18:50:00 -0400
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0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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1 #This file lists the locations of all the trained_dir files
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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2 #under the "trained_dir" directory (a directory that contains a directory
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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3 #for each organism used by glimmer_hmm).
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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4 #This file has the format (white space characters are
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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5 #TAB characters):
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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6 #
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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7 #<unique_id> <display_name> <file_path>
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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8 #
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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9 #glimmer_hmm.loc could look something like this:
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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10 #
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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11 #human Human /path/to/trained_dir/human
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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12 #celegans Celegan /path/to/trained_dir/Celegans
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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13 #arabidopsis Arabidopsis /path/to/trained_dir/arabidopsis
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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14 #rice Rice /path/to/trained_dir/rice
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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15 #zebrafish Zebrafish /path/to/trained_dir/zebrafish
0ddb5ee32ff6 planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
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16 #