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comparison chipseeker.xml @ 4:90fe78a19b55 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/chipseeker commit 6f594126ac7369cc80c30a02a6df57e785dfb45a
author rnateam
date Mon, 26 Nov 2018 06:21:37 -0500
parents 535321abf9a4
children 4c2dbe4dbb4e
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3:535321abf9a4 4:90fe78a19b55
1 <tool id="chipseeker" name="ChIPseeker" version="1.14.2.2"> 1 <tool id="chipseeker" name="ChIPseeker" version="1.16.1">
2 <description>for ChIP peak annotation and visualization</description> 2 <description>for ChIP peak annotation and visualization</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.14.2">bioconductor-chipseeker</requirement> 4 <requirement type="package" version="1.16.1">bioconductor-chipseeker</requirement>
5 <requirement type="package" version="1.4.4">r-optparse</requirement> 5 <requirement type="package" version="1.4.4">r-optparse</requirement>
6 </requirements> 6 </requirements>
7 <version_command><![CDATA[ 7 <version_command><![CDATA[
8 echo $(R --version | grep version | grep -v GNU)", ChIPseeker version" $(R --vanilla --slave -e "library(ChIPseeker); cat(sessionInfo()\$otherPkgs\$ChIPseeker\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", optparse version" $(R --vanilla --slave -e "library(optparse); cat(sessionInfo()\$otherPkgs\$optparse\$Version)" 2> /dev/null | grep -v -i "WARNING: ") 8 echo $(R --version | grep version | grep -v GNU)", ChIPseeker version" $(R --vanilla --slave -e "library(ChIPseeker); cat(sessionInfo()\$otherPkgs\$ChIPseeker\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", optparse version" $(R --vanilla --slave -e "library(optparse); cat(sessionInfo()\$otherPkgs\$optparse\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
9 ]]></version_command> 9 ]]></version_command>