Mercurial > repos > rnateam > graphclust_align_cluster

annotate test-data/alignment2b.cons.tsv @ 1:953353eacec2 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AlignCluster commit 5fe196bd60c65c884ae1685d4b7fb33119564fa7
author rnateam
date Sun, 28 Oct 2018 18:52:14 -0400
parents c05c83b3ef0f
children
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c05c83b3ef0f planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AlignCluster commit 4406735e44aba20859c252be39f4e99df28c7a92
rnateam
parents:
diff changeset
1 Background model Columns Combinations/Pair Consensus MFE Covariance contribution Decision model Energy contribution G+C content Mean pairwise identity Mean single sequence MFE Mean z-score Prediction Reading direction SVM RNA-class probability SVM decision value Sequences Shannon entropy Structure conservation index alignment multihit per_species num_human_seqs_all num_seqs num_seqs_all # seqId basePairCount beginPos bgCykProb bgProb cykScore endPos fold posScore score strCykProb strPostProb strProb rscape_#target_E-val rscape_Found rscape_MSA rscape_PPV rscape_SEN rscape_TP rscape_True rscape_alen rscape_avgid rscape_method rscape_nseq rscape_out cluster_bed cluster_human_ids cluster_human_loc
c05c83b3ef0f planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AlignCluster commit 4406735e44aba20859c252be39f4e99df28c7a92
rnateam
parents:
diff changeset
2 0 dinucleotide 70 1.000 -14.410 0.000 structural RNA alignment quality -14.410 0.497 99.430 -14.750 -0.200 OTHER forward 0.014 -1.570 5.000 0.010 0.980 cluster.aln 0 1 5 19 0.050 result.aln_1 70 99.430 5 RESULTS/result.aln.sum