Mercurial > repos > rnateam > graphclust_align_cluster

comparison test-data/alignment2b-transcript.fa @ 0:c05c83b3ef0f draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AlignCluster commit 4406735e44aba20859c252be39f4e99df28c7a92
author rnateam
date Sat, 27 Oct 2018 13:21:39 -0400
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-1:000000000000 0:c05c83b3ef0f
1 >hg38_chr7_27162434_27166719_- Hoxa9-Xtend5UTR
2 GTTCCGGAGCTGCGGGGTCTCTTAGGCGAGGCTGCCTTTTCCCAAACCGAACTTGCCTTC
3 CATTCATGCCACTTGTAGTTTTTTCCCCAGCTGGGATTCACGGAGCGCAACCAGGCTTGC
4 AGCGCTCATGGTTAGAGCCTCTGAGGCTGGAGCACAGGGCTGGGTCGCCAGCCGCCTGCG
5 CCTGGGAATCCTGATTGCCAGCTGATGAGAAAGGCGGGCTGGGCGCGCGTGTGCGTGGGG
6 TCGAGGGCCGGGGACCGAGCGCGCCGCACAACCAACCAGGCCCTCAAAACCTTCGCCCTG
7 GTGGCGGCTGGCCGCTCCCTCCTGGCCAGCTCCTCCGTGGGGTCCTCGTAGCAAAGGCGA
8 ATTTAAGGGTTGCCCGGGCGCCCCTCGCTCCAGGCGGGTAGCTGTGGGGACCTACACCCG
9 CGGTACTCCCTGAGCGGCCGGTCCCTGCCTGGAGTGCCCTGGTAGGGCCGGCGGCGGCTC
10 CGTTTGGGACGGATCCTGCGTTGAATTTGACTTTTCGAGGGCGGCCGCGGGTAAACTCGC
11 CTCTCCCGGGGACCGCAGGGATTATTTACAGGGAGCTCGCCAACCAAACACAACAGTCTA
12 ACCTTTCCAAGTCCTCGTAAATTTTTACAGCTGGGAGCCACGGCGAGGCAAACGAATCTG
13 TTGGTCGTTTCCGACTTCCCGCCAGCCTGTGTGGCTTCTGAAACAATAACTCCTTATGAA
14 ATATCATAAATATAGATTTAAATACAGTAGAGCGACAATGCGATTTGGCTGCTTTTTTAT
15 GGCTTCAATTATTGTCTAATTTTATGTGAGGGGCTCCGCTGGCCGCACTCGCACGCGGGA
16 CCCGCGCCTTCTTGATGGCGTGATTAATTGTGATATAAAATAGTCCGCTTAAGAAGTGTG
17 TGTATGGGGGGGGAGACGGGAGAGTACAGAGACAAGGCTAGATTTGATCTTTTAATCGTC
18 GTTGGCCACAATTAAAACAAACCCCATCGTAGAGCGGCACGATCCCTTTACATAAAAACA
19 TATGGCTTTTGCTATAAAAATTATGACTGCAAAACATCGGACCATTAATAGCGTGCGGAG
20 TGATTTACGCGTTATTGTTCTGCTGGACGGGCACGTGACGCGCACGGCCAATGGGGGCGC
21 GGGCGCCGGCAACTTATTAGGTGACTGTACTTCCCCCCCGGTGCCACCAAGTTGTTACAT
22 GAAATCTGCAGTTTCATAATTTCCGTGGGTCGGGCCGGGCGGGCCAGGCGCTGGGCACGG
23 TGATGGCCACCACTGGGGCCCTGGGCAACTACTACGTGGACTCGTTCCTGCTGGGCGCCG
24 ACGCCGCGGATGAGCTGAGCGTTGGCCGCTATGCGCCGGGGACCCTGGGCCAGCCTCCCC
25 GGCAGGCGGCGACGCTGGCCGAGCACCCCGACTTCAGCCCGTGCAGCTTCCAGTCCAAGG
26 CGACGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCG
27 CTGCGGTGTaccaccaccatcaccaccacccctacgtgcacccccaggcgcccgtggcgg
28 cggcggcgccggacggcAGGTACATGCGCTCCTGGCTGGAGCCCACGCCCGGTGCGCTCT
29 CCTTCGCGGGCTTGCCCTCCAGCCGGCCTTATGGCATTAAACCTGAACCGCTGTCGGCCA
30 GAAGGGGTGACTGTCCCACGCTTGACACTCACACTTTGTCCCTGACTGACTATGCTTGTG
31 GTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATG
32 CTGAGAATGAGAGCGGCGGAGACAAGCCCCCCATCGATCCCAGTAAGTGTCTCCTCCCTT
33 CAAATCCGCCGCCGCCTCCACGCCGGCCTCCCGGATCTGCTGGCCCGCCAGGTTTCTCTC
34 GAGCCTGCCTTCGTCCTCGCTGGAAGCCTCTCGAGTTGGGGCCAGGAGCCAGAAGTTGGT
35 GTTTGGGACGCCTCAGATAGGGCCCCAAGTCTGGAGAGCAGTGAAGAGCGGCCCGCAGGG
36 CTACGGGAGAGGAGGCGGCTGCTGCAGCGAGAGGGGGCGGGGCGGGCACTTCGGGACGAG
37 CCAAGACTGGCCGCCCCTCTCCTTGGCTGCCCAGGCCCAGGACCGAGATACTTTGGGCCG
38 TTCTTCGAAAGCAGTGCAGCCCAGAGAGCCTTTTGTACAACTAGATTGTCCGTGAGCGGC
39 GGCAGCCAGGGCAGCCGGAGCTGGGACGCTGGGGGAGACGGCCGATTCCTTCCACTTCTT
40 GCCTTCGGCCAGTGGCGGCGTAAATCCTGCCAAGATGAGGCTGCGGGCGACCCGGGCCAC
41 AAGGGTCCCCATGACAGATTATTCAAATAAGCCACAGACGTGATCAGCGGCCTTAGGGCG
42 CCCTGACGGCTTGCCCAGCTCCGAAGGCCTTCCAGGAAGGTTAAATAAGGAGTGGGGGGC
43 GTAGAGGGACAGGTTGGGAAAGAAAGACGAAGTCAGTGAACGGGACAGAGGAATCCTAAT
44 CTTGCTACAGAACACAAGGCAGCATGCTTTCCCTCTGCGTGGCAAGGAGACCTGTTTCCA
45 AATTTCATTCTATACAGCGTTTTGAGAGTGGGAGGAAGGAGAAGGGGGACAAGAGGACAG
46 AGTAGGAGAAAGGAAGGTCTCGGAGGGGAGGGCGAGCCAAAGTTTTACTGCGTGCAATTT
47 TAAGTGACTGTCTGTGCGTCTGTCTGCCAGGGTTCCATTGTGTCCGAGGCCTGACTGCCT
48 TTCCTAACCAGTTCAGCAGAGTTCTGCACTTCGGCCAGAGACCCCATGCAGGAGGCTCAT
49 TTGCCCCAGCGGGATGTGCGTCTTCTGCTCCTAAACCCAGTGTTTCTCTTCCCCGCAGAT
50 AACCCAGCAGCCAACTGGCTTCATGCGCGCTCCACTCGGAAAAAGCGGTGCCCCTATACA
51 AAACACCAGACCCTGGAACTGGAGAAAGAGTTTCTGTTCAACATGTACCTCACCAGGGAC
52 CGCAGGTACGAGGTGGCTCGACTGCTCAACCTCACCGAGAGGCAGGTCAAGATCTGGTTC
53 CAGAACCGCAGGATGAAAATGAAGAAAATCAACAAAGACCGAGCAAAAGACGAGTGATGC
54 CATTTGGGCTTATTTAGAAAAAAGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCC
55 CCCTTCCGCCTTCTCCCTTCTCTCACCCCCACCCTAGCCTCCACCATCCCCGCACAAAGC
56 GGCTCTAAACCTCAGGCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGG
57 CCTGCCGCTTTGATGGAGGAGGTATTGTAAGCTTTCCATTTTCTATAAGAAAAAGGAAAA
58 GTTGAGGGGGGGGCATTAGTGCTGATAGCTGTGTGTGTTAGCTTGTATATATATTTTTAA
59 AAATCTACCTGTTCCTGACTTAAAACAAAAGGAAAGAAACTACCTTTTTATAATGCACAA
60 CTGTTGATGGTAGGCTGTATAGTTTTTAGTCTGTGTAGTTAATTTAATTTGCAGTTTGTG
61 CGGCAGATTGCTCTGCCAAGATACTTGAACACTGTGTTTTATTGTGGTAATTATGTTTTG
62 TGATTCAAACTTCTGTGTACTGGGTGATGCACCCATTGTGATTGTGGAAGATAGAATTCA
63 ATTTGAACTCAGGTTGTTTATGAGGGGAAAAAAACAGTTGCATAGAGTATAGCTCTGTAG
64 TGGAATATGTCTTCTGTATAACTAGGCTGTTAACCTATGATTGTAAAGTAGCTGTAAGAA
65 TTTCCCAGTGAAATAAAAAAAAATTTTAAGTGTTCTCGGGGATGCATAGATTCATCATTT
66 TCTCCACCTTAAAAATGCGGGCATTTAAGTCTGTCCATTATCTATATAGTCCTGTCTTGT
67 CTATTGTATATATAATCTATATGATTAAAGAAAATATGCATAATCAGACAAGCTTGAATA
68 TTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTGCAGAAGGTT
69 ACTACCTAGGGTTTATGCTTAATTTTAATTGGAGGAAATGAATGCTGATTGTAACGGAGT
70 TAATTTTATTGATAATAAATTATACACTATGAAACCGCCATTGGGCTACTGTAGATTTGT
71 ATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTATATTTTGCAATAGT
72 TACCTCAAGGCCTACTGACCAAATTGTTGTGTTGAGATGATATTTAACTTTTTGCCAAAT
73 AAAATATATTGATTCTTTTCTATTTT