Mercurial > repos > rnateam > graphclust_cmfinder
view test-data/model.cmfinder.stk @ 0:78772eedd780 draft
planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/branchForIterations/tools/GraphClust/CMFinder commit 21aaee40723b5341b4236edeb0e72995c2054053
| author | rnateam |
|---|---|
| date | Fri, 16 Dec 2016 07:34:34 -0500 |
| parents | |
| children |
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# STOCKHOLM 1.0 #=GF AU CMfinder 0.2 #=GS 7 WT 1.00 #=GS 9 WT 1.00 #=GS 10 WT 1.00 #=GS 15 WT 1.00 #=GS 16 WT 1.00 #=GS 17 WT 1.00 #=GS 18 WT 1.00 #=GS 23 WT 1.00 #=GS 28 WT 1.00 #=GS 30 WT 1.00 #=GS 31 WT 1.00 #=GS 32 WT 1.00 #=GS 33 WT 1.00 #=GS 35 WT 1.00 #=GS 37 WT 1.00 #=GS 46 WT 1.00 #=GS 7 DE 1.. 83 79.124153 #=GS 9 DE 1.. 73 96.426384 #=GS 10 DE 1.. 73 66.977600 #=GS 15 DE 1.. 73 79.247490 #=GS 16 DE 1.. 72 74.848335 #=GS 17 DE 1.. 71 90.305908 #=GS 18 DE 1.. 72 81.752869 #=GS 23 DE 1.. 74 80.096992 #=GS 28 DE 1.. 71 92.405518 #=GS 30 DE 1.. 72 75.032211 #=GS 31 DE 1.. 73 95.823235 #=GS 32 DE 1.. 73 94.321754 #=GS 33 DE 1.. 72 74.710342 #=GS 35 DE 1.. 72 71.951927 #=GS 37 DE 1.. 82 77.369476 #=GS 46 DE 1.. 72 83.877258 7 GUCAGGAUGGCCGAG-CGGUCUAAGGCGCUGCGUUCAGGUCGCAGUCUCC #=GR 7 SS <<<<<<<.....................<<<<<.......>>>>>..... 9 GCUUCUGUAGUGUAG-UGGU-UAUCACGUUCGCCUCACACGCGAA----- #=GR 9 SS <<<<<<<.....................<<<<<.......>>>>>..... 10 GCCCGGCUAGCUCAGUCGGU--AGAGCAUGAGACUCUUAAUCUCA----- #=GR 10 SS <<<<<<<.....................<<<<<.......>>>>>..... 15 GCCGAAAUAGCUCAGUUGGG--AGAGCGUUAGACUGAAGAUCUAA----- #=GR 15 SS <<<<<<<.....................<<<<<.......>>>>>..... 16 GGGGAUGUAGCUCAG-UGGU--AGAGCGCAUGCUUCGCAUGUAUG----- #=GR 16 SS <<<<<<<.....................<<<<<.......>>>>>..... 17 GCAUUGGUGGUUCAG-UGGU--AGAAUUCUCGCCUCCCACGCGGG----- #=GR 17 SS <<<<<<<.....................<<<<<.......>>>>>..... 18 GCGUUGGUGGUAUAG-UGGU-GAGCAUAGCUGCCUUCCAAGCAGU----- #=GR 18 SS <<<<<<<.....................<<<<<.......>>>>>..... 23 GGCCGGUUAGCUCAGUUGGU-UAGAGCGUGGUGCUAAUAACGCCA----- #=GR 23 SS <<<<-<<.....................<<<<<.......>>>>>..... 28 GCAUUGGUGGUUCAG-UGGU--AGAAUUCUCGCCUGCCACGCGGG----- #=GR 28 SS <<<<<<<.....................<<<<<.......>>>>>..... 30 GGCUCGUUGGUCUAG-GGGU--AUGAUUCUCGCUUAGGGUGCGAG----- #=GR 30 SS <<<<<<<.....................<<<<<.......>>>>>..... 31 GUUUCCGUAGUGUAG-UGGU-UAUCACGUUCGCCUCACACGCGAA----- #=GR 31 SS <<<<<<<.....................<<<<<.......>>>>>..... 32 GUUUCCGUAGUGUAG-CGGU-UAUCACAUUCGCCUCACACGCGAA----- #=GR 32 SS <<<<<<<.....................<<<<<.......>>>>>..... 33 UCCUCGUUAGUAUAG-UGGU-GAGUAUCCCCGCCUGUCACGCGGG----- #=GR 33 SS <<<<<<<.....................<<<<<.......>>>>>..... 35 UCCCUGGUGGUCUAG-UGGC-UAGGAUUCGGCGCUUUCACCGCCG----- #=GR 35 SS <-<<<<<.....................<<<<<.......>>>>>..... 37 GGUAGCGUGGCCGAG-CGGUCUAAGGCGCUGGAUUUAGGCUCCAGUCUCU #=GR 37 SS <<<<<<<.....................<<<<<.......>>>>>..... 46 UCCCUGGUGGUCUAG-UGGU-UAGGAUUCGGCGCUCUCACCGCCG----- #=GR 46 SS <<<<<<<.....................<<<<<.......>>>>>..... #=GC SS_cons (((((((,,,,,,,,,,,,,,,,,,,,,<<<<<_______>>>>>,,,,, #=GC RF GuuUuggUAGUuuAGUUGGUCUAGAAcaUUcgcCUcAcAcgcgAAUCUCu 7 CCUGGAGG-CGUGGGUUCGAAUCCCACUUCUGACA #=GR 7 SS ..........<<<<<.......>>>>>>>>>>>>. 9 -----AGGUCCCCGGUUCGAAACCGGGCAGAAGCA #=GR 9 SS ..........<<<<<.......>>>>>>>>>>>>. 10 -----GGGUCGUGGGUUCGAGCCCCACGUUGGGCG #=GR 10 SS ..........<<<<<.......>>>>>>>>>>>>. 15 -----AGGUCCCUGGUUCGAUCCCGGGUUUCGGCA #=GR 15 SS ..........<<<<<.......>>>>>>>>>>>>. 16 -----AGGCCCCGGGUUCGAUCCCCGGCAUCUCCA #=GR 16 SS ..........<<<<<.......>>>>>>>>>>>>. 17 -----AGA-CCCGGGUUCAAUUCCCGGCCAAUGCA #=GR 17 SS ..........<<<<<.......>>>>>>>>>>>>. 18 -----UGA-CCCGGGUUCGAUUCCCGGCCAACGCA #=GR 18 SS ..........<<<<<.......>>>>>>>>>>>>. 23 -----AGGUCGCGGGUUCGAUCCCCGUACGGGCCA #=GR 23 SS ..........<<<<<.......>>>>>>>->>>>. 28 -----AGG-CCCGGGUUCGAUUCCCGGCCAAUGCA #=GR 28 SS ..........<<<<<.......>>>>>>>>>>>>. 30 -----AGGUCCCGGGUUCAAAUCCCGGACGAGCCC #=GR 30 SS ..........<<<<<.......>>>>>>>>>>>>. 31 -----AGGUCCCCGGUUCGAAACCGGGCGGAAACA #=GR 31 SS ..........<<<<<.......>>>>>>>>>>>>. 32 -----AGGUCCCCGGUUCGAUCCCGGGCGGAAACA #=GR 32 SS ..........<<<<<.......>>>>>>>>>>>>. 33 -----AGA-CCGGGGUUCGAUUCCCCGACGGGGAG #=GR 33 SS ..........<<<<<.......>>>>>>>>>>>>. 35 -----CGC-CCCGGGUUCGAUUCCCGGCCAGGAAU #=GR 35 SS ..........<<<<<.......>>>>>>>>>>->. 37 UCGG-AGG-CGUGGGUUCGAAUCCCACCGCUGCCA #=GR 37 SS ..........<<<<<.......>>>>>>>>>>>>. 46 -----CGG-CCCGGGUUCGAUUCCCGGUCAGGGAA #=GR 46 SS ..........<<<<<.......>>>>>>>>>>>>. #=GC SS_cons ,,,,,,,,,,<<<<<_______>>>>>))))))): #=GC RF uCuGgAGGUCCCgGGUUCGAUUCCcGGccaAaaCA //