Mercurial > repos > rnateam > graphclust_nspdk

comparison NSPDK_candidateClusters.xml @ 7:25fd145b498a draft

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planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/branchForIterations/tools/GraphClust/NSPDK commit 6767a5ffb02052c844e9d862c79912f998f39d8e
author rnateam
date Mon, 20 Nov 2017 04:51:56 -0500
parents 2aaf391798a3
children 90da74fd1c5c
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6:2aaf391798a3 7:25fd145b498a
1 <tool id="NSPDK_candidateClust" name="NSPDK_candidateClusters" version="9.2"> 1 <tool id="NSPDK_candidateClust" name="NSPDK_candidateClusters" version="9.2.2" >
2 <requirements> 2 <requirements>
3 <requirement type="package" version="0.1.12">graphclust-wrappers</requirement> 3 <requirement type="package" version="0.5.2">graphclust-wrappers</requirement>
4 <requirement type="package" version="0.5">perl-array-utils</requirement> 4 <requirement type="package" version="9.2" >nspdk</requirement>
5 <requirement type="package" version="9.2">nspdk</requirement>
6 </requirements> 5 </requirements>
7 <stdio> 6 <stdio>
8 <exit_code range="1:" /> 7 <exit_code range="1:" />
9 </stdio> 8 </stdio>
10 <command> 9 <command>
39 $iteration_num.GLOBAL_hit_blacklist_overlap 38 $iteration_num.GLOBAL_hit_blacklist_overlap
40 #end if 39 #end if
41 ]]> 40 ]]>
42 </command> 41 </command>
43 <inputs> 42 <inputs>
44 <param type="data" name="data_svector" multiple="True"/> 43 <param type="data" name="data_svector" format="zip" multiple="True"/>
45 <param type="data" name="data_fasta" format="fasta" /> 44 <param type="data" name="data_fasta" format="fasta" />
46 <param type="data" name="data_names" format="txt" /> 45 <param type="data" name="data_names" format="txt" />
47 <conditional name="iteration_num"> 46 <conditional name="iteration_num">
48 <param name="iteration_num_selector" type="boolean" checked="no" label="Multiple iterations" help="for single iteration- NO, for multiple-YES"/> 47 <param name="iteration_num_selector" type="boolean" checked="no" label="Multiple iterations" help="for single iteration- NO, for multiple-YES"/>
49 <when value="true"> 48 <when value="true">
94 </outputs> 93 </outputs>
95 <tests> 94 <tests>
96 <test> 95 <test>
97 <param name="data_fasta" value="data.fasta"/> 96 <param name="data_fasta" value="data.fasta"/>
98 <param name="data_names" value="data.names"/> 97 <param name="data_names" value="data.names"/>
99 <param name="data_svector" value="1.group.gspan" /> 98 <param name="data_svector" value="1.data.gspan" ftype="zip" />
100 <conditional name="iteration_num"> 99 <conditional name="iteration_num">
101 <param name="iteration_num_selector" value="false"/> 100 <param name="iteration_num_selector" value="false"/>
102 </conditional> 101 </conditional>
103 <param name="noCache" value="-no-cache"/> 102 <param name="noCache" value="-no-cache"/>
104 <param name="ensf" value="5"/> 103 <param name="ensf" value="5"/>