Mercurial > repos > rnateam > graphclust_nspdk

comparison NSPDK_candidateClusters.xml @ 9:1b142e88d068 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/GraphClust/NSPDK commit 89078a214cefd31d28da75ddebb21f546fba79df
author bgruening
date Tue, 18 Jun 2019 12:43:50 -0400
parents 90da74fd1c5c
children
comparison
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8:90da74fd1c5c 9:1b142e88d068
1 <tool id="NSPDK_candidateClust" name="NSPDK_candidateClusters" version="9.2.3" > 1 <tool id="NSPDK_candidateClust" name="NSPDK_candidateClusters" version="9.2.3.1" >
2 <requirements> 2 <requirements>
3 <requirement type="package" version="0.6.0">graphclust-wrappers</requirement> 3 <requirement type="package" version="0.6.0">graphclust-wrappers</requirement>
4 <requirement type="package" version="9.2" >nspdk</requirement> 4 <requirement type="package" version="9.2" >nspdk</requirement>
5 </requirements> 5 </requirements>
6 <stdio> 6 <stdio>
10 <![CDATA[ 10 <![CDATA[
11 11
12 mkdir ./SVECTOR && 12 mkdir ./SVECTOR &&
13 13
14 #for $ins in $data_svector: 14 #for $ins in $data_svector:
15 ln -f -s '$ins' ./SVECTOR/$ins.element_identifier && 15 ln -f -s '$ins' ./SVECTOR/${ins.element_identifier}.gspan &&
16 #end for 16 #end for
17 17
18 NSPDK_candidateClusters.pl 18 NSPDK_candidateClusters.pl
19 '$data_fasta' 19 '$data_fasta'
20 '$data_names' 20 '$data_names'