# HG changeset patch
# User rnateam
# Date 1489753669 14400
# Node ID 044bb294db780e77dad680934e1d8f9fccce62b4
# Parent  2222a4e8ab4f045ee2d075e91d8d0d485dc75ad5
planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/branchForIterations/tools/GraphClust/CollectResults commit b'7e5cd452018ae9507c2d1cd13dd688a747550393\n'

diff -r 2222a4e8ab4f -r 044bb294db78 glob_report.xml
--- a/glob_report.xml	Mon Mar 13 18:02:02 2017 -0400
+++ b/glob_report.xml	Fri Mar 17 08:27:49 2017 -0400
@@ -1,6 +1,6 @@
 <tool id="glob_report" name="cluster_collection_report" version="0.1">
   <requirements>
-    <requirement type="package" version="0.1.10">graphclust-wrappers</requirement>
+    <requirement type="package" version="0.1.11">graphclust-wrappers</requirement>
     <requirement type="package" version='0.5'>perl-array-utils</requirement>
     <requirement type="package" version='0.18.1'>scikit-learn</requirement>
     <requirement type="package" version='1.8.10'>locarna</requirement>
@@ -47,6 +47,8 @@
           $iteration_num.CI
           $final_partition_soft
           $final_partition_used_cmsearch
+          '$combined_cm'
+
         #end if
 
         #if  str($advanced_opts.advanced_opts_selector) == "show":
@@ -83,6 +85,7 @@
         <param name="CI" type="integer" value="2" size="5" label="Number of current iteration "/>
         <param type="data" name="final_partition_soft" format="txt" />
         <param type="data" name="final_partition_used_cmsearch" format="txt" />
+        <param type="data" name="combined_cm" format="txt" />
       </when>
       <when value="false" ></when>
     </conditional>
@@ -143,6 +146,7 @@
     <data name="final_soft" format="txt" from_work_dir="RESULTS/partitions/final_partition.soft" label="soft_part"   />
     <data name="final_used_cmsearch" format="txt" from_work_dir="RESULTS/partitions/final_partition.used_cmsearch" label="final_partition_used_cmsearch"   />
     <data name="evaluation" format="txt" from_work_dir="RESULTS/evaluation.txt" label="evaluation_of_clusters"  />
+    <data name="combined_cm_out" format="txt" from_work_dir="combined_cmsearch_output" label="combined_cmsearch_output"  />
     <collection name="clusters" type="list" label="CLUSTERS">
       <discover_datasets pattern="(?P&lt;name&gt;^.*\.all$)" directory="RESULTS"  />
     </collection>