Mercurial > repos > rnateam > graphclust_preprocessing

comparison preprocessing.xml @ 6:dff6a5a17221 draft

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planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/branchForIterations/tools/GraphClust commit 4dd7269185f6fb9bdc007028007d6540f4cf057d
author rnateam
date Sat, 25 Mar 2017 16:53:38 -0400
parents e4bd880868b0
children 07ad2d77f28a
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5:e4bd880868b0 6:dff6a5a17221
1 <tool id="preproc" name="Preprocessing" version="0.1"> 1 <tool id="preproc" name="Preprocessing" version="0.1">
2 <requirements> 2 <requirements>
3 <requirement type="package" version="0.1.11">graphclust-wrappers</requirement> 3 <requirement type="package" version="0.1.12">graphclust-wrappers</requirement>
4 </requirements> 4 </requirements>
5 <stdio> 5 <stdio>
6 <exit_code range="1:" /> 6 <exit_code range="1:" />
7 </stdio> 7 </stdio>
8 <command> 8 <command>
45 <help> 45 <help>
46 <![CDATA[ 46 <![CDATA[
47 47
48 **What it does** 48 **What it does**
49 49
50 The tool takes as an input file of sequences in Fasta format and creates the final input for GraphCLust based on given parameters. 50 The tool takes as input a set of sequences in Fasta format and creates the final input for GraphCLust based on given parameters.
51 51
52 **Parameters** 52 **Parameters**
53 53
54 + **window size** : All input sequences are splitted into fragments of this length. 54 + **window size** : All input sequences are splitted into fragments of this length.
55 The shift of the sliding window can be defined via option *window shift in percent*. 55 The shift of the sliding window can be defined via option *window shift in percent*.