Mercurial > repos > rnateam > graphprot_predict_profile

diff test-data/test.params @ 1:20429f4c1b95 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/graphprot commit f3fb925b83a4982e0cf9a0c11ff93ecbb8e4e6d5"
author bgruening
date Wed, 22 Jan 2020 10:14:41 -0500
parents 215925e588c4
children
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--- a/test-data/test.params	Fri May 25 12:17:44 2018 -0400
+++ b/test-data/test.params	Wed Jan 22 10:14:41 2020 -0500
@@ -1,19 +1,18 @@
 epochs: 20
-lambda: 0.001
+lambda: 0.01
 R: 1
-D: 4
+D: 3
 bitsize: 14
 model_type: sequence
-#ADDITIONAL MODEL PARAMETERS
-ap_extlr: 5
-gev_my: -2.5408
-gev_sigma: 1.6444
-gev_xi: -0.1383
-p50_score: 6.51534 
-p50_p_val: 0.0009059744 
-# ADDITIONAL MODEL INFO
-organism: hsa
-rbp_ens_gene_id: ENSG00000011304
-rbp_gene_name: PTBP1
-clip_method: eCLIP
-pubmed_id: 27018577
+pos_train_ws_pred_median: 0.760321
+pos_train_profile_median: 5.039610
+pos_train_avg_profile_median_1: 4.236340
+pos_train_avg_profile_median_2: 3.868431
+pos_train_avg_profile_median_3: 3.331277
+pos_train_avg_profile_median_4: 2.998667
+pos_train_avg_profile_median_5: 2.829782
+pos_train_avg_profile_median_6: 2.626623
+pos_train_avg_profile_median_7: 2.447083
+pos_train_avg_profile_median_8: 2.349919
+pos_train_avg_profile_median_9: 2.239829
+pos_train_avg_profile_median_10: 2.161676