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comparison intarna.xml @ 14:d3db19200b24 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/intarna commit 4fa66bd81eee32fefeca17b7c7e326127f579546
author bgruening
date Tue, 13 Sep 2022 21:33:14 +0000
parents ddfd02440cfa
children 0377acb3f91b
comparison
equal deleted inserted replaced
13:ddfd02440cfa 14:d3db19200b24
1 <tool id="intarna" name="IntaRNA" version="3.3.1"> 1 <tool id="intarna" name="IntaRNA" version="3.3.2">
2 <description>Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites.</description> 2 <description>Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites.</description>
3 <macros> 3 <macros>
4 <macro name="query_macro"> 4 <macro name="query_macro">
5 <param argument="--query" format="fasta" help="Sequences have to use IUPAC nucleotide encoding. File must be in FASTA format" label="Query sequence(s)" name="query" type="data" /> 5 <param argument="--query" format="fasta" help="Sequences have to use IUPAC nucleotide encoding. File must be in FASTA format" label="Query sequence(s)" name="query" type="data" />
6 <conditional name="qAcc_cond"> 6 <conditional name="qAcc_cond">
66 </param> 66 </param>
67 <param argument="--outPairwise" checked="false" falsevalue="" help="" label="Enables pairwise sequence processing, i.e. interactions are only computed for each corresponding query-target pair (same index) instead of all-vs-all" truevalue="--outPairwise" type="boolean" /> 67 <param argument="--outPairwise" checked="false" falsevalue="" help="" label="Enables pairwise sequence processing, i.e. interactions are only computed for each corresponding query-target pair (same index) instead of all-vs-all" truevalue="--outPairwise" type="boolean" />
68 </macro> 68 </macro>
69 </macros> 69 </macros>
70 <requirements> 70 <requirements>
71 <requirement type="package" version="3.3.1">intarna</requirement> 71 <requirement type="package" version="3.3.2">intarna</requirement>
72 </requirements> 72 </requirements>
73 <version_command>IntaRNA --version</version_command> 73 <version_command>IntaRNA --version</version_command>
74 <command detect_errors="exit_code"><![CDATA[ 74 <command detect_errors="exit_code"><![CDATA[
75 75
76 IntaRNA 76 IntaRNA