Mercurial > repos > rnateam > intarna
changeset 4:e1d64afef3ba draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/intarna commit 6a688af07eb65f08922cf59dabcbc1b16277db8c
| author | rnateam |
|---|---|
| date | Fri, 23 Mar 2018 17:55:25 -0400 |
| parents | 03c09b961567 |
| children | 233dfabc8592 |
| files | intarna.xml test-data/intarna_result.tabular |
| diffstat | 2 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/intarna.xml Wed Oct 18 16:13:53 2017 -0400 +++ b/intarna.xml Fri Mar 23 17:55:25 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="intarna" name="IntaRNA" version="2.1.0"> +<tool id="intarna" name="IntaRNA" version="2.1.0.1"> <description>Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites.</description> <macros> <macro name="query_macro"> @@ -84,7 +84,7 @@ </macro> </macros> <requirements> - <requirement type="package" version="2.0.4">intarna</requirement> + <requirement type="package" version="2.1.0">intarna</requirement> </requirements> <stdio> <exit_code range="1:" level="fatal" description="Error occurred. Please check Tool Standard Error" />
--- a/test-data/intarna_result.tabular Wed Oct 18 16:13:53 2017 -0400 +++ b/test-data/intarna_result.tabular Fri Mar 23 17:55:25 2018 -0400 @@ -1,5 +1,5 @@ id1 start1 end1 id2 start2 end2 subseqDP hybridDP E -mRNA1 85 95 ncRNA1 21 32 GUGGUGAGGAG&CUCCUCACACAC (((((((((((&)))))))).))) -11.8782 -mRNA1 127 135 ncRNA2 18 25 GGCACCUGC&GCAGGGCC (((.(((((&)))))))) -6.95474 -mRNA2 86 97 ncRNA1 20 31 UGUGUGACGAGU&ACUCCUCACACA (((((((.((((&)))).))))))) -8.16661 -mRNA2 15 18 ncRNA2 22 25 GGCC&GGCC ((((&)))) -4.99627 +mRNA1 85 95 ncRNA1 21 32 GUGGUGAGGAG&CUCCUCACACAC (((((((((((&)))))))).))) -12.0345 +mRNA1 127 135 ncRNA2 18 25 GGCACCUGC&GCAGGGCC (((.(((((&)))))))) -7.20671 +mRNA2 86 97 ncRNA1 20 31 UGUGUGACGAGU&ACUCCUCACACA (((((((.((((&)))).))))))) -8.33678 +mRNA2 15 18 ncRNA2 22 25 GGCC&GGCC ((((&)))) -5.12558