Mercurial > repos > rnateam > locarna_pairwise

comparison test-data/haca.snoRNA-c.aln @ 3:f3f08a777c10 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 10ccc47885ce71e602d66e157bd475f1facbd042
author bgruening
date Mon, 05 Dec 2022 14:29:12 +0000
parents b06dc2bb3716
children 4839df2b2f6b
comparison
equal deleted inserted replaced
2:433601e9f132 3:f3f08a777c10
1 CLUSTAL W --- LocARNA 1.9.0 1 CLUSTAL W --- LocARNA 1.9.2.3
2 2
3 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGG 3 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUC-CAUUCCCAGCUUGCUCCGUAGCUGGCG
4 ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGU 4 ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGUGCUGAGAGAAAAC---CC-UUG--AUUGUAUU-CUUGCCCUGGG---AUUAUACCAGUGG
5 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGC 5 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGCUGCCACAGAAACAC--UGUGACUCAUGG------GCCCUGUUCCUGUGUCCCAGGCUCAG
6 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGCUGG-CCCAUG--GGUGACCCU 6 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGC-UGGCCCAUG--GGUGACCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA
7 #A1 ............................................................ 7 #A1 ................................................................AAAAAA..................................................
8 #A2 ............................................................ 8 #A2 ................................................................123456..................................................
9 9
10 ACA7 AGGGAAAGCAAGCCUGGCAGAG-GCACCCAUUCCAUUCCCAGCUUGCUCCGUAGCUGGCG 10 ACA7 AUUGGAA-----GACACUC-UGC-----GACA
11 ACA30 GCUGAGAGAAAAC---CC-UUG---AUUGUAUUCUUGCCCUGGG---AUUAUACCAGUGG 11 ACA30 CAACUGU-----CACUCAA-UGG-----GACA
12 ACA5 UGCCACAGAAACAC--UGUGAC-UCAUGG-----GCCCUGUUCCUGUGUCCCAGGCUCAG 12 ACA5 GGAUAAA-----UUUGGUU-ACA-----GACA
13 ACA59 GGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA
14 #A1 ....AAAAAA..................................................
15 #A2 ....123456..................................................
16
17 ACA7 AUUGGA--AGA---CACU-CUGCG-----ACA
18 ACA30 CAACUG--UCA---CUCA-AUGGG-----ACA
19 ACA5 GGAUAA--AUU---UGGU-UACAG-----ACA
20 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA 13 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA
21 #A1 .............................BBB 14 #A1 .............................BBB
22 #A2 .............................123 15 #A2 .............................123