Mercurial > repos > rnateam > locarna_pairwise
diff test-data/haca.snoRNA-c.aln @ 3:f3f08a777c10 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 10ccc47885ce71e602d66e157bd475f1facbd042
| author | bgruening |
|---|---|
| date | Mon, 05 Dec 2022 14:29:12 +0000 |
| parents | b06dc2bb3716 |
| children | 4839df2b2f6b |
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--- a/test-data/haca.snoRNA-c.aln Sat Jan 21 17:38:54 2017 -0500 +++ b/test-data/haca.snoRNA-c.aln Mon Dec 05 14:29:12 2022 +0000 @@ -1,22 +1,15 @@ -CLUSTAL W --- LocARNA 1.9.0 - -ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGG -ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGU -ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGC -ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGCUGG-CCCAUG--GGUGACCCU -#A1 ............................................................ -#A2 ............................................................ +CLUSTAL W --- LocARNA 1.9.2.3 -ACA7 AGGGAAAGCAAGCCUGGCAGAG-GCACCCAUUCCAUUCCCAGCUUGCUCCGUAGCUGGCG -ACA30 GCUGAGAGAAAAC---CC-UUG---AUUGUAUUCUUGCCCUGGG---AUUAUACCAGUGG -ACA5 UGCCACAGAAACAC--UGUGAC-UCAUGG-----GCCCUGUUCCUGUGUCCCAGGCUCAG -ACA59 GGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA -#A1 ....AAAAAA.................................................. -#A2 ....123456.................................................. +ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUC-CAUUCCCAGCUUGCUCCGUAGCUGGCG +ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGUGCUGAGAGAAAAC---CC-UUG--AUUGUAUU-CUUGCCCUGGG---AUUAUACCAGUGG +ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGCUGCCACAGAAACAC--UGUGACUCAUGG------GCCCUGUUCCUGUGUCCCAGGCUCAG +ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGC-UGGCCCAUG--GGUGACCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA +#A1 ................................................................AAAAAA.................................................. +#A2 ................................................................123456.................................................. -ACA7 AUUGGA--AGA---CACU-CUGCG-----ACA -ACA30 CAACUG--UCA---CUCA-AUGGG-----ACA -ACA5 GGAUAA--AUU---UGGU-UACAG-----ACA +ACA7 AUUGGAA-----GACACUC-UGC-----GACA +ACA30 CAACUGU-----CACUCAA-UGG-----GACA +ACA5 GGAUAAA-----UUUGGUU-ACA-----GACA ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA #A1 .............................BBB #A2 .............................123