Mercurial > repos > rnateam > locarna_pairwise

diff test-data/haca.snoRNA.aln @ 3:f3f08a777c10 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 10ccc47885ce71e602d66e157bd475f1facbd042
author bgruening
date Mon, 05 Dec 2022 14:29:12 +0000
parents b06dc2bb3716
children 4839df2b2f6b
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--- a/test-data/haca.snoRNA.aln	Sat Jan 21 17:38:54 2017 -0500
+++ b/test-data/haca.snoRNA.aln	Mon Dec 05 14:29:12 2022 +0000
@@ -1,16 +1,11 @@
-CLUSTAL W --- LocARNA 1.9.0
-
-ACA7               ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGG
-ACA30              UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGU
-ACA5               UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGC
-ACA59              GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGCUGG-CCCAUG--GGUGACCCU
+CLUSTAL W --- LocARNA 1.9.2.3
 
-ACA7               AGGGAAAGCAAGCCUGGCAGAG-GCACCCAUUCCAUUCCCAGCUUGCUCCGUAGCUGGCG
-ACA30              GCUGAGAGAAAAC---CC-UUG---AUUGUAUUCUUGCCCUGGG---AUUAUACCAGUGG
-ACA5               UGCCACAGAAACAC--UGUGAC-UCAUGG-----GCCCUGUUCCUGUGUCCCAGGCUCAG
-ACA59              GGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA
+ACA7               ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUC-CAUUCCCAGCUUGCUCCGUAGCUGGCG
+ACA30              UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGUGCUGAGAGAAAAC---CC-UUG--AUUGUAUU-CUUGCCCUGGG---AUUAUACCAGUGG
+ACA5               UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGCUGCCACAGAAACAC--UGUGACUCAUGG------GCCCUGUUCCUGUGUCCCAGGCUCAG
+ACA59              GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGC-UGGCCCAUG--GGUGACCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA
 
-ACA7               AUUGGA--AGA---CACU-CUGCG-----ACA
-ACA30              CAACUG--UCA---CUCA-AUGGG-----ACA
-ACA5               GGAUAA--AUU---UGGU-UACAG-----ACA
+ACA7               AUUGGAA-----GACACUC-UGC-----GACA
+ACA30              CAACUGU-----CACUCAA-UGG-----GACA
+ACA5               GGAUAAA-----UUUGGUU-ACA-----GACA
 ACA59              ACAAUACUUACUCUCGUUGGUGAUAAGGAACA