Mercurial > repos > rnateam > locarna_pairwise_p

comparison test-data/haca.snoRNA.aln @ 2:535f2e41d4f7 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 10ccc47885ce71e602d66e157bd475f1facbd042
author bgruening
date Mon, 05 Dec 2022 14:29:23 +0000
parents c5f150d2686f
children
comparison
equal deleted inserted replaced
1:53583f715a8c 2:535f2e41d4f7
1 CLUSTAL W --- LocARNA 1.9.0 1 CLUSTAL W --- LocARNA 1.9.2.3
2 2
3 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGG 3 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUC-CAUUCCCAGCUUGCUCCGUAGCUGGCG
4 ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGU 4 ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGUGCUGAGAGAAAAC---CC-UUG--AUUGUAUU-CUUGCCCUGGG---AUUAUACCAGUGG
5 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGC 5 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGCUGCCACAGAAACAC--UGUGACUCAUGG------GCCCUGUUCCUGUGUCCCAGGCUCAG
6 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGCUGG-CCCAUG--GGUGACCCU 6 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGC-UGGCCCAUG--GGUGACCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA
7 7
8 ACA7 AGGGAAAGCAAGCCUGGCAGAG-GCACCCAUUCCAUUCCCAGCUUGCUCCGUAGCUGGCG 8 ACA7 AUUGGAA-----GACACUC-UGC-----GACA
9 ACA30 GCUGAGAGAAAAC---CC-UUG---AUUGUAUUCUUGCCCUGGG---AUUAUACCAGUGG 9 ACA30 CAACUGU-----CACUCAA-UGG-----GACA
10 ACA5 UGCCACAGAAACAC--UGUGAC-UCAUGG-----GCCCUGUUCCUGUGUCCCAGGCUCAG 10 ACA5 GGAUAAA-----UUUGGUU-ACA-----GACA
11 ACA59 GGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA
12
13 ACA7 AUUGGA--AGA---CACU-CUGCG-----ACA
14 ACA30 CAACUG--UCA---CUCA-AUGGG-----ACA
15 ACA5 GGAUAA--AUU---UGGU-UACAG-----ACA
16 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA 11 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA