Mercurial > repos > rnateam > mafft

comparison test-data/sample_nuc.fa @ 15:bf28a8cff401 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
author bgruening
date Wed, 20 Mar 2024 07:34:52 +0000
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14:6f28e90db932 15:bf28a8cff401
1 >MZ681498.1 Rotylenchus bunae isolate GE29E-RO6 small subunit ribosomal RNA gene, partial sequence
2 ATGCATGTATAAGTATAACCTGCCAGACAGGGAAACTGCGGACGGCTCATTACAACAGCCTTAATTTACT
3 TGACCTTGACAACCTACTTGGATAACTGCGGTAATTCTGGAGCTAATACATGCACCAAAGCTCCGATCCC
4 TCGTGGAGAGGAGCGCATTTGTTCGCCACAAAACCAAACGCCCCACAAGGGCGTTCAGTGTTGACTCAGA
5 ATAACTAAGCTGATCGCACGGTCTTGCACCGGCGACGTGTCTTTCAAGTGTCTGCCTTATCAACTTTCGA
6 TGGTAGTGTATCTGCCTACCATGGTTGTGACGGGTAACGGAGGATAAGGGTTCGACTCCGGAGAAGGGGC
7 CTGAGAAATGGCCACTACGTCTAAGGATGGCAGCAGGCGCGCAAATTACCCACTCTCAACACGCTGAGGA
8 GGTAGTGAAGAGAAATAACGAGACCGTTCTCACATGAGGCCGGTCATCGGAATGGGTACAACTTAAACCC
9 TTTAACGAGTATCTATGAGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCTCAAAATGCAT
10 AGAATTATTGCTGCGGTTAAAAAGCTCGTAGTTGGATCTGTGCTGGCCGCCCGGTCTGCTCGCTGAGCAC
11 GCACTGGTGCGGTCGGCTTTCCTGCCCGGTACCTCCCCGGCGTTGGCCTTCACCGGTCGGCGTCGGTGGC
12 CGGGCGAGTTTACTTTGAACAAATCAGAGTGCTTCAAACAGGCGTTTCGCTTGAATGTTCGTGCATGGAA
13 TAATAGAAGAGGATTTCGGTCCGATTTTGTTGGTTTTGCTGACCGAGATAATGGTTAACAGAGACAAACG
14 GGGCCATTCGTATTGCTACGTGAGAGGTG
15
16 >MZ681497.1 Rotylenchus bunae isolate GE29A-R1 small subunit ribosomal RNA gene, partial sequence
17 CTGCGGACGGCTCATTACAACAGCCTTAATTTACTTGACCTTGACAACCTACTTGGATAACTGCGGTAAT
18 TCTGGAGCTAATACATGCACCAAAGCTCCGATCCCTCGTGGAGAGGAGCGCATTTGTTCGCCACAAAACC
19 AAACGCCCCACAAGGGCGTTCAGTGTTGACTCAGAATAACTAAGCTGATCGCACGGTCTTGCACCGGCGA
20 CGTGTCTTTCAAGTGTCTGCCTTATCAACTTTCGATGGTAGTGTATCTGCCTACCATGGTTGTGACGGGT
21 AACGGAGGATAAGGGTTCGACTCCGGAGAAGGGGCCTGAGAAATGGCCACTACGTCTAAGGATGGCAGCA
22 GGCGCGCAAATTACCCACTCTCAACACGCTGAGGAGGTAGTGAAGAGAAATAACGAGACCGTTCTCACAT
23 GAGGCCGGTCATCGGAATGGGTACAACTTAAACCCTTTAACGAGTATCTATGAGAGGGCAAGTCTGGTGC
24 CAGCAGCCGCGGTAATTCCAGCTCTCAAAATGCATAGAATTATTGCTGCGGTTAAAAAGCTCGTAGTTGG
25 ATCTGTGCTGGCCGCCCGGTCTGCTCGCTGAGCACGCACTGGTGCGGTCGGCTTTCCTGCCCGGTACCTC
26 CCCGGCGTTGGCCTTCACCGGTCGGCGTCGGTGGCCGGGCGAGTTTACTTTGAACAAATCAGAGTGCTTC
27 AAACAGGCGTTTCGCTTGAATGTTCGTGCATGGAATAATAGAAGAGGATTTCGGTCCGATTTTGTTGGTT
28 TTGCTGACCGAGATAATGGTTAACAGAGACAAACGGGGCCATTCGTATTGCTACGTGAGAGGTGAAATTC
29 TTGGACCGTAGCAAGACGGACTACAGC
30
31 >ON855043.1 Rotylenchus sp. JQ-2022 internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence
32 GGCCGTCACTCCGGGGGGACAACACAAACGCCCTGAGGGCTTTACTCGTTGGGGTGCAAACTGGATCGAG
33 TGGCGCACACATCCCTTCCACGCAAAGACCTGCTGAAGAGGTCGGAGGCGATGAGTCCGAGCAACCCCAC
34 AAGCAACCAGGTTGGGGAAGCTGCACACGATACTGGGATGCACGCCCCCAGGGCACCTAACGGCTGCCGC
35 TGGCGTCTGTGCGTCGTTGAGCAGTTGTTGCGCACTTGCTTTTGTCGGAGCTGTACTCGGAGCATGCTGG
36 CATGGACCCACACAAAAGTGTGTGGCAGCGGCCACACACCCCTGTCCATGTCCTACGGACCGTAGCTAGG
37 GCGTGCTCTGGGTTTCTTCGGCTGGCAGTGTTGCTACGTCCGTGGCTGTGATGAGACGACGCGGTAGGGC
38 CTTGTGCGATGCGCCTGCACTTGGCTTAAGACTTGATGAGCTCACTGCGAAGAGCCGCCAGCAACCTTTT
39 TTTCATATACATTTTTTACAGGCACACTTGTGTGCTGATGAACAAAAATTCTAGCCTTATCGGTGGATCA
40 CTCGGCTCGTAGGTCGATG
41