Mercurial > repos > rnateam > mafft
view test-data/mafft_seed_out.aln @ 18:0a507f4bd19a draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 3216eed8c66b2fff7c571ab27d3f1e6aaddc186f
| author | bgruening |
|---|---|
| date | Mon, 14 Jul 2025 18:16:36 +0000 |
| parents | |
| children |
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>_seed_PINI_ARATH/9-617 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------HVMTAMVPLYVAMILA- YGSVKWWKIFTPDQCSGINRFVALFA-----------VPLLSFHFIAANNPYA------- ---MNLRFLAADSLQKVIVLSLLFLWCKLSR---NGSLDWTITLFSLSTLPNTLVMGIPL LKGMYGN----------------------------------FSGDLMVQIVVLQCIIWYT LML------------------FLFEYRGAKLLISEQFP-DTAGSIVSIHVDSDIMSLDGR Q-PLETEAEIKEDGKLHVTVRRSNASRSDIYS-----RRSQGL-SATPRPSNLTNAEIYS LQSSRNPTPRGSSFNHTDFY---------------SMMASGGGRNSNFGPGEA------- --------VFGSKGPTPRPSNYEEDGGPAKPTAAGTAAGAGRFHYQSGGSGGGGGAHYPA PNPGMFSPNTGGGGGTAAKGNAPVVGGKRQDGN------GRDLHMFVWSSSASPVSDVFG GGGGNHHADYSTATNDHQKDVKISVPQGNSNDNQYVEREEFSFGNKDDDSKVLATDGGNN ISNKTTQAKVMPPTSVMTRLILIMVWRKLIRNPNSYSSLFGITWSLI-SFKWNIEMP--- ---ALIAKSISILSDAGLGMAMFSL--------GL------------------------- ---FMALNPRIIACGNRRAAFA--------AAMRFVVGPAVMLVASYAVGLRGV--LLHV AIIQ------------AALPQGIVPFVFAKEYNVHPDILSTAVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------LYY >_seed_Q9FVF6_POPPZ/9-609 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------HVMTAMVPLYVAMILA- YGSVKWWKIFTPDQCSGINRFVALFA-----------VPLLSFHFISTNDPYN------- ---MNLRFITADSLQKVIVLVVLALWTKLSK---RGCLEWTITLFSLSTLPNTLVMGIPL LKGMYGD----------------------------------YSGSLMVQVVVLQCIIWYT LML------------------FMFEYRGAKLLISEQFP-DTAGSIVSIHVDSDIMSLDGR Q-PLETEAAIKEDGKLHVTVRKSNASRSDIFS-----RRSQGLSSTTPRPSNLTNAEIYS LQSSRNPTPRGSSFNHTDFY---------------SMMA--AGRNSNFGASDVY------ -------GLSASRGPTPRPSNFEEEHGGSNKPRFHHYHAPGGATHYPAPNPGMFSPTTAA SKGVSANANNAAAAAAKKPNGQAQQKAED-------------GRDLHMFVWSSSASPVSD VFGGHDYGAHDLKDVRVAVSPGKVEGQRENQEDYNLERDDFSFGNRGLDRERNSHEGEKG GFD--GKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLV-SFRWNVKMP--- ---LIIAKSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPRIIACGNSIATFS--------MAVRFLTGPAIMAAASIAVGIRGT--LLHI AIVQ------------AALPQGIVPFVFAKEYNVHPEILSTGVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_B8AIF2_ORYSI/9-590 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------HVMTAMVPLYVAMILA- YGSVKWWRIFTPDQCSGINRFVALFA-----------VPLLSFHFISTNNPYT------- ---MNLRFIAADTLQKLMVLAMLTAWSHLSR---RGSLEWTITLFSLSTLPNTLVMGIPL LKGMYGE----------------------------------FSGSLMVQIVVLQCIIWYT LML------------------FMFEYRGARMLITEQFP-DTAANIASIVVDPDVVSLDGR RDAIETETEVKEDGRIHVTVRRSNASRSDIYS-----RRSMGFSSTTPRPSNLTNAEIYS LQSSRNPTPRGSSFNHTDFY---------------SMV----GRSSNFGAADA------- --------FGVRTGATPRPSNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSSAPKGAK KAATNGQAKGEDLHMFVWSS-------------------------------SASPVSDVF GGGAPDYNDAAAVKSPRKMDGAKDREDYVERDDFSFGNRGVMDRDAEAGDEKAAAAAGAD PSKAMAAPTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLV-CFRWNFEMP--- ---AIVLKSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPHIIACGNKVATYA--------MAVRFLAGPAVMAAASFAVGLRGT--LLHV AIVQ------------AALPQGIVPFVFAKEYSVHPSILSTAVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_PIN6_ARATH/9-565 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TVMCAMAPLYFAMFVA- YGSVKWCKIFTPAQCSGINRFVSVFA-----------VPVLSFHFISQNNPYK------- ---MDTMFILADTLSKIFVFVLLSLWAVFFK---AGGLDWLITLFSIATLPNTLVMGIPL LQAMYGD----------------------------------YTQTLMVQLVVLQCIIWYT LLL------------------FLFELRAARLLIRAEFPGQAAGSIAKIQVDDDVISLDGM D-PLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLC--------LTPRASNLSNAEIFS VN----------TPNNRFFHGGGGSGTLQFYNGSNEIMF-CNGDLGGFGFTRPGLGASPR RLSGYASSDAYSLQPTPRASNFNELDVNGNGTPVWMKSPAAGRIYRQSSPKMMWESGQRH AAK--------------------------------------------------------- ---------DINGSVPEKEISFRDALKAAPQATAAGGGASMEEGAAGKDTTPVA-AIG-K -QE-------MPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLI-SFKWNIPMP--- ---NIVDFSIKIISDAGLGMAMFSL--------GL------------------------- ---FMALQPKMIPCGAKKATMG--------MLIRFISGPLFMAGASLLVGLRGS--RLHA AIVQ------------AALPQGIVPFVFAREYNLHPDLLSTLVI---------------- -FG-MIV-S-LPVTI--------------------------------------------- -------------------------------------------------------LYY >_seed_YFDV_ECOLI/4-307 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------FFIGDLLPIIVIMLLG- YFSGRR-ETFSEDQARAFNKLVLNYA-----------LPAALFVSITRANREM------- ---IFADTRLTLVSLVVIVGCFFFSWFGCYK-FFKRTHAEAAVCALIAGSPTIGFLGFAV LDPIYGD----------------------SV---------STGLVVAIISIIVNAITIPI GLY------------------LLNPSSGADGKK--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------NSNLSALISAAKEPVVWAPVLATILVLV-GVKIP------- ---AAWDPTFNLIAKANSGVAVFAA--------GL------------------------- ---TLAAHKFEFSAEIAYN-----------TFLKLILMPLALLLVGMACHLNSE--HLQM MVLA------------GALPPAFSGIIIASRFNVYTRTGTASLA---------------- -VS-VLG-F-VVTAP--------------------------------------------- -------------------------------------------------------LWI >_seed_YWKB_BACSU/5-315 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------DILILLAPIFFVIVLG- WFAGHF-GSYDAKSAKGVSTLVTKYA-----------LPAHFIAGILTTSRSE------- ---FLSQVPLMISLIIGIVGFYIIILLVCRF-IFKYDLTNSSVFSLNSAQPTFAFMGIPV LGSLFGA----------------------------------NEVAIPIAVTGIVVNAILD PLA------------------IIIATVGESSKKNEESGD--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------SFWKMTGKSILHGLCEPLAAAPLISMILVLVFNFTLP------- ---ELGVKMLDQLGSTTSGVALFAV--------GV------------------------- ---TVGIRKIKLSMPAIG-----------IALLKVAVQPALMFLIALAIGLPAD-QTTKA ILL-------------VAFPGSAVAAMIATRFEKQEEETATAFV---------------- -VS-AIL-S-LISLP--------------------------------------------- -------------------------------------------------------III >_seed_P71425_KLEPN/4-313 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------VIIHALAPIFVIMLLG- FWAGKA-GMVDNKNVSLLNIFVMDFA-----------LPATLFSATVQTPWAG------- ---IVAQSPLVLVLTGAMWITYAAIYFLATS-VFKRTPQDGAVLTLTVALPNYAALGLPI LGSVLGE---------------------------------GASTSLSVAVSIACGSVLMT PFC------------------LLILEREKARAAGENSG---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------STLAMLPVLMWRSVKKPIVWGPLLGVVLSAI-GIKMP------- ---DLLLASIKPLGLAATAAALFLT--------GV------------------------- ---ILSARKLQLNALIAAS-----------TIVKLLVQPFIAWGLVMLLGLHGS-IAITA ILM-------------IALAAGFFGVVFGNRFGVQSPDAEAVLL---------------- -LS-SVL-C-ILSLP--------------------------------------------- -------------------------------------------------------LFI >_seed_Q98L58_RHILO/3-308 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------PLTETVLFVFSLVALG- YLAGLT-GYLRPASGEGISDFAVSVA-----------MPLLLFQTMVKADFHG------- -----VAPWPLWGAYFTAVAITWAAGHLVTTRIFGRDARAGVVGGVSSAYSNVVLLGAPF ILGIFGP-----------------------S---------GFEVLSLLVSVHLPVMMMAS IVL------------------FEMFGRGGGEHV--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------HPLRVLRSFLRRLFINPLIIGILLGLAWRLS-GVPLP------- ---SLVMRLVDALANTAGPVALFAM--------GL------------------------- ---SLRRFGVSGNVRPALA----------LSALKLFLMPALVLAFVLLLGLPPL--TAKV AVVV------------AALPSGINSYLIAVQFNTGQALASNQMT---------------- -IA-TAC-A-AVTTA--------------------------------------------- -------------------------------------------------------FWL >_seed_O67397_AQUAE/2-289 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------FIYEKVFFILLIIAFA- YTLKRG-GIFKEEHALPFINYVIYFA-----------LPFTIFKNLRF---LE------- ---IGKEVLGVVLIAWGAIFLSILFAFLFGK-FLKLEEKTLRAFLLVSSFGNTAFMGYPF LYALEGN----------------------------------EGLKYAILYDQLGSFLMVI TLG--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------LFLAIGKFDLKELILFPPFIALVLSFLLHGV-RFP--------- ---QFFEHSVEIISGSLIPVILFSL--------GL------------------------- ---RLNFTDMKSDYRTLFSA----------LFIKMFLVPLLILVFLKIFGLTSL--PYRV ALIE------------SAMPPMVFAGVLALKYELDFRLAFSAIT---------------- -LG-IVI-S-LFTVP--------------------------------------------- -------------------------------------------------------VFR >_seed_Q97M34_CLOAB/2-296 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------YVFEQIVILFLIMGIG- YYAAKS-KIIDDDTTSHLSNFIVSIT-----------LPLMILTSFNVEYSRK------- ---TVITIINLLVFSVAAFIISIVIGKII---SFKFAMDKRDILMFMSIFSNCGFIGFPV LKVVYGN----------------------------------KGVLYTSIFNLVYNVFIWT IGI------------------VIINDKREKIDY--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------KKILFNHNIIAVIVGVFLMLL-SIKIP------- ---YVMSSAFNLIGSMTAPLSMIVI--------GS------------------------- ---ILA--------GVDFNDIFKDWSLYYIAILRLIIIPLIIYFALKPFQINKI--VIGV IIIC------------EAMPGGTLCPILAKSCNRNFKYASKIVL---------------- -IT-TIL-S-MMTIP--------------------------------------------- -------------------------------------------------------FMT >_seed_YB8B_YEAST/13-413 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------LVFESVLQVVIIALAG- FWSASS-GLLPKQSQKIISLLNVDLF-----------TPCLIFSKLAKSLSMA------- ---KIFEIAIIPIFFGLTTGISFISGKIMSR-ILDLDKDETNFVVANSVFGNSNSLPVSL TLSLAYTLPNLTW-D-----QIPNDNRDNVA---------SRGILYLLIFQQIGQMLRWS WGY------------------NKLMKWSGENTQHMPPSQVQSLLERTPNIDNEELVNEEQ EEQELLEEENNRMNSSFLSSSSIGDKIWQKSCTVFER----------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------IRANLNPPLYSMIFAVVVAAI-GPLQRELFMEDG FINNTFAEAVTQLGSVSIPLILVVL--------GS------------------------- ---NLYPSA-----EVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAV------KYIN VSILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILF---------------- -WG-YAV-L-SLPVS--------------------------------------------- -------------------------------------------------------IIV >_seed_YDQ4_SCHPO/18-440 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------PIIESDLEVIVIALGG- YVLAKK-GFLPRDAQKVISSLNVYFF-----------TPCLVFEKVGNGLNLK------- ---MLIDLSLLPVFYVIISAASILISFLLAK-LFRLTPRQRNFATACITFQNSNSLPLAL VSSLATTVKDLLW-D-----KIPDDTPDKVA---------SRGIMYLLIFSQLGQALRWS YGY------------------RILLSPNQPEDPLPIGNRSWSHSDVNEEEIQNLLASSAN VDGVQNSVQANEGSTVQTDSSAISKNDNVQVETSNEEVGGFGAASSKISK---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------FIVLLLDFFSPPLYSLFIALFIAVV-PPLQRFFFEEGS FVEGSITSGIRMAGQVAVPMILVVL--------GA------------------------- ---SLATDISKTEPTQEVRKNNDTRVIIVCLLGRMVVVPLALLPAFSLLS------YFSE ISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLW---------------- -WS-YAV-F-TPPNS--------------------------------------------- -------------------------------------------------------LLL >_seed_PILS4_ARATH/9-407 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------ASSKPVVETLLITSVGF YLALDTVNLLGHDARKHLNNIVFYVF-----------SPSLIGSRLADSVTYE------- ---SLVKMWFMPVNVLLTFMIGSLLGWIVIV-ITKPPSQLRGLIISCCASGNLGTMPLII IPAICKE-------K-----GGPFGDSESCE---------KYGMGYVTLSMT--AFFISV YKHDTNWYVSGGNGLLMDLYINLMR------VLSNSPVETHTHSIESNYDDSCKVQLISS K------------------------------------------EEEKEEDNHQVGRWEEV KQ---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------RVVSLSKKVNLGSIFAPATIAAIIALVIGLI-TPLRNLIIGTVA PF-RVIQDSLTLLGDGAIPAMTLIL--------GG------------------------- ---NLLKGMRRSEVRSSEMKNSCIIGV---LVARYILLPVSGVLLVRGAY-------KLD LVTS-EPLYQFVLLLQYAVPPAMNLGTKTQLFGAGESECSVIML---------------- -WT-YSL-A-AVSLT--------------------------------------------- -------------------------------------------------------VWP >_seed_PILS5_ARATH/9-388 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------VASMPVIQVLFMSLVGA FMASDRCKLFPVEARNSMNKVVFVLF-----------APALMFANLAQTVTLE------- ---DIISWWFMPVNMGLTFLIGGLLGWLVVK-ILKPPPYLEGLIVATCSAGNMGNLPIIL VPAICDE-------D-----KSPFGNRSVCR---------TVGLSYASFSMALGGFYIWT YTF------------------RLIKGSAMKVQAIEESEKIAIKSSNSDLEADHKTHLLGA P-----------------------------------------EDKENKVVKEKTGFWRKG VD---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------FLHEI-----LEELLAPPTLGAIIGFIFGAV-RWLRNLIIGDDA PL-RIVQSTAKLLGDGTIPCMTIIL--------GG------------------------- ---NLIQG-----LRSSAVKPMVVLGI---VCVRYIAMPIIGIGIVLTAA-------NLG FLPA-DPLFQYVLMLQFTLPPAMNIGTMTQLYNVAQDECSVLML---------------- -WT-YLV-A-ILALT--------------------------------------------- -------------------------------------------------------VWS >_seed_PILS2_ARATH/18-441 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------SGVVPLLKLICLTVIGL LLAHPKTQLVPRATFRLLSKLVFALF-----------LPCLIFTELGESITLD------- ---NIVQWWFIPVNVLLSAVVGSLIGYLVVL-ICRPPPEFNRFTIVMTAFGNTGNLLLAI VSSVCHT--------------KTNPFGPNCN---------SRGVSYVSFAQWVAVILVYT VVY------------------HMMEPPLEYYEVVEEEG-VEIEEINVENHDASRPLLVEA EWPGIEDKETEHCKTPFIARVFNSISSFSQTSFPEVDLGGEYGGESSSPRSIQCLAEPRV MR---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------RIRVVAEQTPVKHILQPPTIASLLAIIIGSV-PQLKSVVFGYDA PL-SFITDSLNIMGSAMVPSVMLVL--------GG------------------------- ---MLSEGPNESTLGLRTTIGI--------SVARLLVLPLVGIGIVMSAD-------KLG LISSADPMFKFVLLLQYSTPSAILLGAIASLRGYAVREASALLF---------------- -WQ-HIF-A-LLSLT--------------------------------------------- -------------------------------------------------------FYI >_seed_PILS6_ARATH/30-423 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------IAVMPIAKVFTMCFLGL LMASKYVNILPPSGRKLLNGLVFSLL-----------LPCLIFSQLGQAVTLQ------- ---KMLQWWFIPVNVVLGTISGSIIGFIVAS-IVRPPYPYFKFTIIQIGVGNIGNVPLVL LAALCRD-------T-----SNPFGDSEKCS---------IDGTAYISFGQWVGAIILYT YVY------------------QMFAPPPEGFDAEEENLALKTLPVDAAPEQVPLLTQNFP KDFSPTQDL--------------------------------LPVQSTEPRGRGVSRKGKI AQ---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------IFVFLYEKLKLKQIVQPAIVASILAMILGAI-PFTKKLIFTNGA PL-FFFTDSCMILGDAMIPCILLAL--------GG------------------------- ---NLINGPGSSKLGFKTTAAI--------IIGRLVLVPPVGLGIVTVAD-------KLG FLPADDKMFRFVLLLQHTMPTSVLSGAVANLRGCG-RESAAVLF---------------- -WV-HIF-A-IFSMA--------------------------------------------- -------------------------------------------------------GWM >_seed_PIN4_ARATH/9-611 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TVLTAVVPLYVAMILA- YGSVQWWKIFSPDQCSGINRFVAIFA-----------VPLLSFHFISTNDPYA------- ---MNFRFVAADTLQKIIMLVLLALWANLTK---NGSLEWMITIFSLSTLPNTLVMGIPL LIAMYGT----------------------------------YAGSLMVQVVVLQCIIWYT LLL------------------FLFEYRGAKLLIMEQFP-ETGASIVSFKVESDVVSLDGH D-FLETDAEIGNDGKLHVTVRKSNASRRSLMM--------------TPRPSNLTGAEIYS LS----STPRGSNFNHSDFY---------------SVMGFPGGRLSNFGPADLY------ -------SVQSSRGPTPRPSNFEENNAVKYGFYNNTNSSVPAAGSYPAPNPEFSTGTGVS TKPNKIPKENQQQLQEKDSKASHDAKELHMFVWSSSASPVSDVFGGGAGDNVATEQSEQG AKEIRMVVSDQPRKSNARGGGDDIGGLDSGEGEREIEKATAGLNKMGSNSTAELEAAG-G -DGGGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWALV-AYRWHVAMP--- ---KILQQSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPKIIACGNSVATFA--------MAVRFITGPAIMAVAGIAIGLHGD--LLRI AIVQ------------AALPQGIVPFVFAKEYNVHPTILSTGVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_PIN7_ARATH/9-614 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TVLTAVIPLYVAMILA- YGSVRWWKIFSPDQCSGINRFVAIFA-----------VPLLSFHFISSNNPYA------- ---MNLRFIAADTLQKLIMLTLLIIWANFTR---SGSLEWSITIFSLSTLPNTLVMGIPL LIAMYGE----------------------------------YSGSLMVQIVVLQCIIWYT LLL------------------FLFEYRGAKILIMEQFP-ETGASIVSFKVESDVVSLDGH D-FLETDAQIGDDGKLHVTVRKSNASRRSFYG--------GGGTNMTPRPSNLTGAEIYS L----NTTPRGSNFNHSDFY---------------SMMGFPGGRLSNFGPADMY------ -------SVQSSRGPTPRPSNFEESCAMASSPRFGYYPGGAPGSYPAPNPEFSTGNKTGS KAPKENHHHVGKSNSNDAKELHMFVWGSNGSPV-----SDRAGLQVDNGANEQVGKSDQG GAKEIRMLISDHTQNGENKAGPMNGDYGGEEESERVKEVPNGLHKLRCNSTAELNPKEAI ETGETVPVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWALV-AFRWDVAMP--- ---KIIQQSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPKLIACGNSTATFA--------MAVRFFTGPAVMAVAAMAIGLRGD--LLRV AIVQ------------AALPQGIVPFVFAKEYNVHPAILSTGVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_PINI_ARATH/9-617 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------HVMTAMVPLYVAMILA- YGSVKWWKIFTPDQCSGINRFVALFA-----------VPLLSFHFIAANNPYA------- ---MNLRFLAADSLQKVIVLSLLFLWCKLSR---NGSLDWTITLFSLSTLPNTLVMGIPL LKGMYGN----------------------------------FSGDLMVQIVVLQCIIWYT LML------------------FLFEYRGAKLLISEQFP-DTAGSIVSIHVDSDIMSLDGR Q-PLETEAEIKEDGKLHVTVRRSNASRSDIYS-----RRSQGL-SATPRPSNLTNAEIYS LQSSRNPTPRGSSFNHTDFY---------------SMMASGGGRNSNFGPGEA------- --------VFGSKGPTPRPSNYEEDGGPAKPTAAGTAAGAGRFHYQSGGSGGGGGAHYPA PNPGMFSPNTGGGGGTAAKGNAPVVGGKRQDGN------GRDLHMFVWSSSASPVSDVFG GGGGNHHADYSTATNDHQKDVKISVPQGNSNDNQYVEREEFSFGNKDDDSKVLATDGGNN ISNKTTQAKVMPPTSVMTRLILIMVWRKLIRNPNSYSSLFGITWSLI-SFKWNIEMP--- ---ALIAKSISILSDAGLGMAMFSL--------GL------------------------- ---FMALNPRIIACGNRRAAFA--------AAMRFVVGPAVMLVASYAVGLRGV--LLHV AIIQ------------AALPQGIVPFVFAKEYNVHPDILSTAVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------LYY >_seed_Q9FVF6_POPPZ/9-609 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------HVMTAMVPLYVAMILA- YGSVKWWKIFTPDQCSGINRFVALFA-----------VPLLSFHFISTNDPYN------- ---MNLRFITADSLQKVIVLVVLALWTKLSK---RGCLEWTITLFSLSTLPNTLVMGIPL LKGMYGD----------------------------------YSGSLMVQVVVLQCIIWYT LML------------------FMFEYRGAKLLISEQFP-DTAGSIVSIHVDSDIMSLDGR Q-PLETEAAIKEDGKLHVTVRKSNASRSDIFS-----RRSQGLSSTTPRPSNLTNAEIYS LQSSRNPTPRGSSFNHTDFY---------------SMMA--AGRNSNFGASDVY------ -------GLSASRGPTPRPSNFEEEHGGSNKPRFHHYHAPGGATHYPAPNPGMFSPTTAA SKGVSANANNAAAAAAKKPNGQAQQKAED-------------GRDLHMFVWSSSASPVSD VFGGHDYGAHDLKDVRVAVSPGKVEGQRENQEDYNLERDDFSFGNRGLDRERNSHEGEKG GFD--GKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLV-SFRWNVKMP--- ---LIIAKSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPRIIACGNSIATFS--------MAVRFLTGPAIMAAASIAVGIRGT--LLHI AIVQ------------AALPQGIVPFVFAKEYNVHPEILSTGVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_B8AIF2_ORYSI/9-590 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------HVMTAMVPLYVAMILA- YGSVKWWRIFTPDQCSGINRFVALFA-----------VPLLSFHFISTNNPYT------- ---MNLRFIAADTLQKLMVLAMLTAWSHLSR---RGSLEWTITLFSLSTLPNTLVMGIPL LKGMYGE----------------------------------FSGSLMVQIVVLQCIIWYT LML------------------FMFEYRGARMLITEQFP-DTAANIASIVVDPDVVSLDGR RDAIETETEVKEDGRIHVTVRRSNASRSDIYS-----RRSMGFSSTTPRPSNLTNAEIYS LQSSRNPTPRGSSFNHTDFY---------------SMV----GRSSNFGAADA------- --------FGVRTGATPRPSNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSSAPKGAK KAATNGQAKGEDLHMFVWSS-------------------------------SASPVSDVF GGGAPDYNDAAAVKSPRKMDGAKDREDYVERDDFSFGNRGVMDRDAEAGDEKAAAAAGAD PSKAMAAPTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLV-CFRWNFEMP--- ---AIVLKSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPHIIACGNKVATYA--------MAVRFLAGPAVMAAASFAVGLRGT--LLHV AIVQ------------AALPQGIVPFVFAKEYSVHPSILSTAVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_PIN6_ARATH/9-565 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TVMCAMAPLYFAMFVA- YGSVKWCKIFTPAQCSGINRFVSVFA-----------VPVLSFHFISQNNPYK------- ---MDTMFILADTLSKIFVFVLLSLWAVFFK---AGGLDWLITLFSIATLPNTLVMGIPL LQAMYGD----------------------------------YTQTLMVQLVVLQCIIWYT LLL------------------FLFELRAARLLIRAEFPGQAAGSIAKIQVDDDVISLDGM D-PLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLC--------LTPRASNLSNAEIFS VN----------TPNNRFFHGGGGSGTLQFYNGSNEIMF-CNGDLGGFGFTRPGLGASPR RLSGYASSDAYSLQPTPRASNFNELDVNGNGTPVWMKSPAAGRIYRQSSPKMMWESGQRH AAK--------------------------------------------------------- ---------DINGSVPEKEISFRDALKAAPQATAAGGGASMEEGAAGKDTTPVA-AIG-K -QE-------MPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLI-SFKWNIPMP--- ---NIVDFSIKIISDAGLGMAMFSL--------GL------------------------- ---FMALQPKMIPCGAKKATMG--------MLIRFISGPLFMAGASLLVGLRGS--RLHA AIVQ------------AALPQGIVPFVFAREYNLHPDLLSTLVI---------------- -FG-MIV-S-LPVTI--------------------------------------------- -------------------------------------------------------LYY >_seed_YFDV_ECOLI/4-307 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------FFIGDLLPIIVIMLLG- YFSGRR-ETFSEDQARAFNKLVLNYA-----------LPAALFVSITRANREM------- ---IFADTRLTLVSLVVIVGCFFFSWFGCYK-FFKRTHAEAAVCALIAGSPTIGFLGFAV LDPIYGD----------------------SV---------STGLVVAIISIIVNAITIPI GLY------------------LLNPSSGADGKK--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------NSNLSALISAAKEPVVWAPVLATILVLV-GVKIP------- ---AAWDPTFNLIAKANSGVAVFAA--------GL------------------------- ---TLAAHKFEFSAEIAYN-----------TFLKLILMPLALLLVGMACHLNSE--HLQM MVLA------------GALPPAFSGIIIASRFNVYTRTGTASLA---------------- -VS-VLG-F-VVTAP--------------------------------------------- -------------------------------------------------------LWI >_seed_YWKB_BACSU/5-315 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------DILILLAPIFFVIVLG- WFAGHF-GSYDAKSAKGVSTLVTKYA-----------LPAHFIAGILTTSRSE------- ---FLSQVPLMISLIIGIVGFYIIILLVCRF-IFKYDLTNSSVFSLNSAQPTFAFMGIPV LGSLFGA----------------------------------NEVAIPIAVTGIVVNAILD PLA------------------IIIATVGESSKKNEESGD--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------SFWKMTGKSILHGLCEPLAAAPLISMILVLVFNFTLP------- ---ELGVKMLDQLGSTTSGVALFAV--------GV------------------------- ---TVGIRKIKLSMPAIG-----------IALLKVAVQPALMFLIALAIGLPAD-QTTKA ILL-------------VAFPGSAVAAMIATRFEKQEEETATAFV---------------- -VS-AIL-S-LISLP--------------------------------------------- -------------------------------------------------------III >_seed_P71425_KLEPN/4-313 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------VIIHALAPIFVIMLLG- FWAGKA-GMVDNKNVSLLNIFVMDFA-----------LPATLFSATVQTPWAG------- ---IVAQSPLVLVLTGAMWITYAAIYFLATS-VFKRTPQDGAVLTLTVALPNYAALGLPI LGSVLGE---------------------------------GASTSLSVAVSIACGSVLMT PFC------------------LLILEREKARAAGENSG---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------STLAMLPVLMWRSVKKPIVWGPLLGVVLSAI-GIKMP------- ---DLLLASIKPLGLAATAAALFLT--------GV------------------------- ---ILSARKLQLNALIAAS-----------TIVKLLVQPFIAWGLVMLLGLHGS-IAITA ILM-------------IALAAGFFGVVFGNRFGVQSPDAEAVLL---------------- -LS-SVL-C-ILSLP--------------------------------------------- -------------------------------------------------------LFI >_seed_Q98L58_RHILO/3-308 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------PLTETVLFVFSLVALG- YLAGLT-GYLRPASGEGISDFAVSVA-----------MPLLLFQTMVKADFHG------- -----VAPWPLWGAYFTAVAITWAAGHLVTTRIFGRDARAGVVGGVSSAYSNVVLLGAPF ILGIFGP-----------------------S---------GFEVLSLLVSVHLPVMMMAS IVL------------------FEMFGRGGGEHV--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------HPLRVLRSFLRRLFINPLIIGILLGLAWRLS-GVPLP------- ---SLVMRLVDALANTAGPVALFAM--------GL------------------------- ---SLRRFGVSGNVRPALA----------LSALKLFLMPALVLAFVLLLGLPPL--TAKV AVVV------------AALPSGINSYLIAVQFNTGQALASNQMT---------------- -IA-TAC-A-AVTTA--------------------------------------------- -------------------------------------------------------FWL >_seed_O67397_AQUAE/2-289 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------FIYEKVFFILLIIAFA- YTLKRG-GIFKEEHALPFINYVIYFA-----------LPFTIFKNLRF---LE------- ---IGKEVLGVVLIAWGAIFLSILFAFLFGK-FLKLEEKTLRAFLLVSSFGNTAFMGYPF LYALEGN----------------------------------EGLKYAILYDQLGSFLMVI TLG--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------LFLAIGKFDLKELILFPPFIALVLSFLLHGV-RFP--------- ---QFFEHSVEIISGSLIPVILFSL--------GL------------------------- ---RLNFTDMKSDYRTLFSA----------LFIKMFLVPLLILVFLKIFGLTSL--PYRV ALIE------------SAMPPMVFAGVLALKYELDFRLAFSAIT---------------- -LG-IVI-S-LFTVP--------------------------------------------- -------------------------------------------------------VFR >_seed_Q97M34_CLOAB/2-296 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------YVFEQIVILFLIMGIG- YYAAKS-KIIDDDTTSHLSNFIVSIT-----------LPLMILTSFNVEYSRK------- ---TVITIINLLVFSVAAFIISIVIGKII---SFKFAMDKRDILMFMSIFSNCGFIGFPV LKVVYGN----------------------------------KGVLYTSIFNLVYNVFIWT IGI------------------VIINDKREKIDY--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------KKILFNHNIIAVIVGVFLMLL-SIKIP------- ---YVMSSAFNLIGSMTAPLSMIVI--------GS------------------------- ---ILA--------GVDFNDIFKDWSLYYIAILRLIIIPLIIYFALKPFQINKI--VIGV IIIC------------EAMPGGTLCPILAKSCNRNFKYASKIVL---------------- -IT-TIL-S-MMTIP--------------------------------------------- -------------------------------------------------------FMT >_seed_YB8B_YEAST/13-413 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------LVFESVLQVVIIALAG- FWSASS-GLLPKQSQKIISLLNVDLF-----------TPCLIFSKLAKSLSMA------- ---KIFEIAIIPIFFGLTTGISFISGKIMSR-ILDLDKDETNFVVANSVFGNSNSLPVSL TLSLAYTLPNLTW-D-----QIPNDNRDNVA---------SRGILYLLIFQQIGQMLRWS WGY------------------NKLMKWSGENTQHMPPSQVQSLLERTPNIDNEELVNEEQ EEQELLEEENNRMNSSFLSSSSIGDKIWQKSCTVFER----------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------IRANLNPPLYSMIFAVVVAAI-GPLQRELFMEDG FINNTFAEAVTQLGSVSIPLILVVL--------GS------------------------- ---NLYPSA-----EVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAV------KYIN VSILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILF---------------- -WG-YAV-L-SLPVS--------------------------------------------- -------------------------------------------------------IIV >_seed_YDQ4_SCHPO/18-440 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------PIIESDLEVIVIALGG- YVLAKK-GFLPRDAQKVISSLNVYFF-----------TPCLVFEKVGNGLNLK------- ---MLIDLSLLPVFYVIISAASILISFLLAK-LFRLTPRQRNFATACITFQNSNSLPLAL VSSLATTVKDLLW-D-----KIPDDTPDKVA---------SRGIMYLLIFSQLGQALRWS YGY------------------RILLSPNQPEDPLPIGNRSWSHSDVNEEEIQNLLASSAN VDGVQNSVQANEGSTVQTDSSAISKNDNVQVETSNEEVGGFGAASSKISK---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------FIVLLLDFFSPPLYSLFIALFIAVV-PPLQRFFFEEGS FVEGSITSGIRMAGQVAVPMILVVL--------GA------------------------- ---SLATDISKTEPTQEVRKNNDTRVIIVCLLGRMVVVPLALLPAFSLLS------YFSE ISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLW---------------- -WS-YAV-F-TPPNS--------------------------------------------- -------------------------------------------------------LLL >_seed_PILS4_ARATH/9-407 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------ASSKPVVETLLITSVGF YLALDTVNLLGHDARKHLNNIVFYVF-----------SPSLIGSRLADSVTYE------- ---SLVKMWFMPVNVLLTFMIGSLLGWIVIV-ITKPPSQLRGLIISCCASGNLGTMPLII IPAICKE-------K-----GGPFGDSESCE---------KYGMGYVTLSMT--AFFISV YKHDTNWYVSGGNGLLMDLYINLMR------VLSNSPVETHTHSIESNYDDSCKVQLISS K------------------------------------------EEEKEEDNHQVGRWEEV KQ---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------RVVSLSKKVNLGSIFAPATIAAIIALVIGLI-TPLRNLIIGTVA PF-RVIQDSLTLLGDGAIPAMTLIL--------GG------------------------- ---NLLKGMRRSEVRSSEMKNSCIIGV---LVARYILLPVSGVLLVRGAY-------KLD LVTS-EPLYQFVLLLQYAVPPAMNLGTKTQLFGAGESECSVIML---------------- -WT-YSL-A-AVSLT--------------------------------------------- -------------------------------------------------------VWP >_seed_PILS5_ARATH/9-388 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------VASMPVIQVLFMSLVGA FMASDRCKLFPVEARNSMNKVVFVLF-----------APALMFANLAQTVTLE------- ---DIISWWFMPVNMGLTFLIGGLLGWLVVK-ILKPPPYLEGLIVATCSAGNMGNLPIIL VPAICDE-------D-----KSPFGNRSVCR---------TVGLSYASFSMALGGFYIWT YTF------------------RLIKGSAMKVQAIEESEKIAIKSSNSDLEADHKTHLLGA P-----------------------------------------EDKENKVVKEKTGFWRKG VD---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------FLHEI-----LEELLAPPTLGAIIGFIFGAV-RWLRNLIIGDDA PL-RIVQSTAKLLGDGTIPCMTIIL--------GG------------------------- ---NLIQG-----LRSSAVKPMVVLGI---VCVRYIAMPIIGIGIVLTAA-------NLG FLPA-DPLFQYVLMLQFTLPPAMNIGTMTQLYNVAQDECSVLML---------------- -WT-YLV-A-ILALT--------------------------------------------- -------------------------------------------------------VWS >_seed_PILS2_ARATH/18-441 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------SGVVPLLKLICLTVIGL LLAHPKTQLVPRATFRLLSKLVFALF-----------LPCLIFTELGESITLD------- ---NIVQWWFIPVNVLLSAVVGSLIGYLVVL-ICRPPPEFNRFTIVMTAFGNTGNLLLAI VSSVCHT--------------KTNPFGPNCN---------SRGVSYVSFAQWVAVILVYT VVY------------------HMMEPPLEYYEVVEEEG-VEIEEINVENHDASRPLLVEA EWPGIEDKETEHCKTPFIARVFNSISSFSQTSFPEVDLGGEYGGESSSPRSIQCLAEPRV MR---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------RIRVVAEQTPVKHILQPPTIASLLAIIIGSV-PQLKSVVFGYDA PL-SFITDSLNIMGSAMVPSVMLVL--------GG------------------------- ---MLSEGPNESTLGLRTTIGI--------SVARLLVLPLVGIGIVMSAD-------KLG LISSADPMFKFVLLLQYSTPSAILLGAIASLRGYAVREASALLF---------------- -WQ-HIF-A-LLSLT--------------------------------------------- -------------------------------------------------------FYI >_seed_PILS6_ARATH/30-423 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------IAVMPIAKVFTMCFLGL LMASKYVNILPPSGRKLLNGLVFSLL-----------LPCLIFSQLGQAVTLQ------- ---KMLQWWFIPVNVVLGTISGSIIGFIVAS-IVRPPYPYFKFTIIQIGVGNIGNVPLVL LAALCRD-------T-----SNPFGDSEKCS---------IDGTAYISFGQWVGAIILYT YVY------------------QMFAPPPEGFDAEEENLALKTLPVDAAPEQVPLLTQNFP KDFSPTQDL--------------------------------LPVQSTEPRGRGVSRKGKI AQ---------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------IFVFLYEKLKLKQIVQPAIVASILAMILGAI-PFTKKLIFTNGA PL-FFFTDSCMILGDAMIPCILLAL--------GG------------------------- ---NLINGPGSSKLGFKTTAAI--------IIGRLVLVPPVGLGIVTVAD-------KLG FLPADDKMFRFVLLLQHTMPTSVLSGAVANLRGCG-RESAAVLF---------------- -WV-HIF-A-IFSMA--------------------------------------------- -------------------------------------------------------GWM >_seed_PIN4_ARATH/9-611 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TVLTAVVPLYVAMILA- YGSVQWWKIFSPDQCSGINRFVAIFA-----------VPLLSFHFISTNDPYA------- ---MNFRFVAADTLQKIIMLVLLALWANLTK---NGSLEWMITIFSLSTLPNTLVMGIPL LIAMYGT----------------------------------YAGSLMVQVVVLQCIIWYT LLL------------------FLFEYRGAKLLIMEQFP-ETGASIVSFKVESDVVSLDGH D-FLETDAEIGNDGKLHVTVRKSNASRRSLMM--------------TPRPSNLTGAEIYS LS----STPRGSNFNHSDFY---------------SVMGFPGGRLSNFGPADLY------ -------SVQSSRGPTPRPSNFEENNAVKYGFYNNTNSSVPAAGSYPAPNPEFSTGTGVS TKPNKIPKENQQQLQEKDSKASHDAKELHMFVWSSSASPVSDVFGGGAGDNVATEQSEQG AKEIRMVVSDQPRKSNARGGGDDIGGLDSGEGEREIEKATAGLNKMGSNSTAELEAAG-G -DGGGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWALV-AYRWHVAMP--- ---KILQQSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPKIIACGNSVATFA--------MAVRFITGPAIMAVAGIAIGLHGD--LLRI AIVQ------------AALPQGIVPFVFAKEYNVHPTILSTGVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY >_seed_PIN7_ARATH/9-614 ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TVLTAVIPLYVAMILA- YGSVRWWKIFSPDQCSGINRFVAIFA-----------VPLLSFHFISSNNPYA------- ---MNLRFIAADTLQKLIMLTLLIIWANFTR---SGSLEWSITIFSLSTLPNTLVMGIPL LIAMYGE----------------------------------YSGSLMVQIVVLQCIIWYT LLL------------------FLFEYRGAKILIMEQFP-ETGASIVSFKVESDVVSLDGH D-FLETDAQIGDDGKLHVTVRKSNASRRSFYG--------GGGTNMTPRPSNLTGAEIYS L----NTTPRGSNFNHSDFY---------------SMMGFPGGRLSNFGPADMY------ -------SVQSSRGPTPRPSNFEESCAMASSPRFGYYPGGAPGSYPAPNPEFSTGNKTGS KAPKENHHHVGKSNSNDAKELHMFVWGSNGSPV-----SDRAGLQVDNGANEQVGKSDQG GAKEIRMLISDHTQNGENKAGPMNGDYGGEEESERVKEVPNGLHKLRCNSTAELNPKEAI ETGETVPVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWALV-AFRWDVAMP--- ---KIIQQSISILSDAGLGMAMFSL--------GL------------------------- ---FMALQPKLIACGNSTATFA--------MAVRFFTGPAVMAVAAMAIGLRGD--LLRV AIVQ------------AALPQGIVPFVFAKEYNVHPAILSTGVI---------------- -FG-MLI-A-LPITL--------------------------------------------- -------------------------------------------------------VYY > 1== M63632 1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91] ----------MN-------------------GTEGDNFYV---------------P---- -------------------------FSNKTGLARSPYEYPQY------------------ ----------------YLAEPW-------------------KYSALAAYMFFLILVGFPV NFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLF-GFTVTMYTSMN-GYFV--FGPTMC SIEGFFATLGGEVALWSLVVLAIERYIVICKPMGNF-RFGNTHAIMGVAFTWIMALACAA P-PLVG------WSR-----YIPEGMQCSCGPDYYTLNPNFNNESYVVYMFVVHFLVPFV IIF--------------FCYGRLLCTVKEAAAAQQESA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEKEVTRMV----VLMVIGFLVCWVPYASVAFYIFTHQGS---DFGA TFMT--------LPAFFAKSSALYNPVIYILMNKQFRNCMITTL-----CC---GKNPLG DDE-SGA-S-TSK-TEVSSVS-TSPVSPA------------------------------- ---------------------------------------------------------- > 2== U22180 1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94] ----------MN-------------------GTEGPNFYV---------------P---- -------------------------FSNITGVVRSPFEQPQY------------------ ----------------YLAEPW-------------------QFSMLAAYMFLLIVLGFPI NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG-GFTTTLYTSLH-GYFV--FGPTGC NLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALACAA P-PLVG------WSR-----YIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI VIF--------------FCYGQLVFTVKEAAAQQQESA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TTQKAEKEVTRMV----IIMVIFFLICWLPYASVAMYIFTHQGS---NFGP IFMT--------LPAFFAKTASIYNPIIYIMMNKQFRNCMLTSL-----CC---GKNPLG DDE-ASA-T-ASK-TETSQVA-PA------------------------------------ ---------------------------------------------------------- > 3== M92038 1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9 ----------MN-------------------GTEGINFYV---------------P---- -------------------------MSNKTGVVRSPFEYPQY------------------ ----------------YLAEPW-------------------KYRLVCCYIFFLISTGLPI NLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACF-GFTVTFYTAWN-GYFV--FGPVGC AVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGNF-RFSATHAMMGIAFTWVMAFSCAA P-PLFG------WSR-----YMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIHFIIPVV VIF--------------FSYGRLICKVREAAAQQQESA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TTQKAEKEVTRMV----ILMVLGFMLAWTPYAVVAFWIFTNKGA---DFTA TLMA--------VPAFFSKSSSLYNPIIYVLMNKQFRNCMITTI-----CC---GKNPFG DEDVSSTVS-QSK-TEVSSVS-SSQVSPA------------------------------- ---------------------------------------------------------- > 4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish ----------MN-------------------GTEGKNFYV---------------P---- -------------------------MSNRTGLVRSPFEYPQY------------------ ----------------YLAEPW-------------------QFKILALYLFFLMSMGLPI NGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCF-GFTVTFYTAIN-GYFV--LGPTGC AVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSF-KFSSSHAFAGIAFTWVMALACAA P-PLFG------WSR-----YIPEGMQCSCGPDYYTLNPDYNNESYVIYMFVCHFILPVA VIF--------------FTYGRLVCTVKAAAAQQQDSA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEREVTKMV----ILMVFGFLIAWTPYATVAAWIFFNKGA---DFSA KFMA--------IPAFFSKSSALYNPVIYVLLNKQFRNCMLTTI-----FC---GKNPLG DDE-SSTVS-TSK-TEVSSVS-PA------------------------------------ ---------------------------------------------------------- > 5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish ----------MN-------------------GTEGNNFYV---------------P---- -------------------------LSNRTGLVRSPFEYPQY------------------ ----------------YLAEPW-------------------QFKLLAVYMFFLICLGLPI NGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCF-GFTVTFYTAIN-GYFA--LGPTGC AVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSF-KFSSTHASAGIAFTWVMAMACAA P-PLVG------WSR-----YIPEGIQCSCGPDYYTLNPEYNNESYVLYMFICHFILPVT IIF--------------FTYGRLVCTVKAAAAQQQDSA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEREVTKMV----ILMVLGFLVAWTPYATVAAWIFFNKGA---AFSA QFMA--------IPAFFSKTSALYNPVIYVLLNKQFRSCMLTTL-----FC---GKNPLG DEE-SSTVS-TSK-TEVSSVS-PA------------------------------------ ---------------------------------------------------------- > 6== L11864 1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208- ----------MKQVPE-----------------FHEDFYI---------------P---- -----------------------IPLDINNLSAYSPFLVPQD------------------ ----------------HLGNQG-------------------IFMAMSVFMFFIFIGGASI NILTILCTIQFKKLRSHLNYILVNLSIANLFVAIF-GSPLSFYSFFN-RYFI--FGATAC KIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGNF-TFKTPHAIAGCILPWISALAASL P-PLFG------WSR-----YIPEGLQCSCGPDWYTTNNKYNNESYVMFLFCFCFAVPFG TIV--------------FCYGQLLITLKLAAKAQADSA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEREVTKMV----VVMVLGFLVCWAPYASFSLWIVSHRGE---EFDL RMAT--------IPSCLSKASTVYNPVIYVLMNKQFRSCMMKMV-----C----GKN-IE EDE-AST-S-SQV-TQVSSVA-PEK----------------------------------- ---------------------------------------------------------- > 7== M13299 1 human BCP <>[Science232(4747),193-202'86] ----------MRKMS-------------------EEEFYL-------------------- ---------------------------FKNISSVGPWDGPQY------------------ ----------------HIAPVW-------------------AFYLQAAFMGTVFLIGFPL NAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIF-SVFPVFVASCN-GYFV--FGRHVC ALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGNF-RFSSKHALTVVLATWTIGIGVSI P-PFFG------WSR-----FIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLS LIC--------------FSYTQLLRALKAVAAQQQESA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TTQKAEREVSRMV----VVMVGSFCVCYVPYAAFAMYMVNNRNH---GLDL RLVT--------IPSFFSKSACIYNPIIYCFMNKQFQACIMKMV-----C----GKA-MT DES-DTC-S-SQK-TEVSTVS-STQVGPN------------------------------- ---------------------------------------------------------- > 8=opsin, greensensitive human (fragment) S07060 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------DLAETVI-ASTISIVNQVS-GYFV--LGHPMC VLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVWTA P-PIFG------WSR-----YWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLS IIV--------------LCYLQVWLAIRAVAKQQKESE---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEKEVTRMV----VVMVLAFC-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------------- > 9== K03494 1 human GCP <>[Science232(4747),193-202'86] ----------MAQQWSLQRLAGRHPQDSYEDSTQSSIFTY-------------------- ---------------------------TNSNSTRGPFEGPNY------------------ ----------------HIAPRW-------------------VYHLTSVWMIFVVIASVFT NGLVLAATMKFKKLRHPLNWILVNLAVADLAETVI-ASTISVVNQVY-GYFV--LGHPMC VLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVWTA P-PIFG------WSR-----YWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLS IIV--------------LCYLQVWLAIRAVAKQQKESE---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEKEVTRMV----VVMVLAFCFCWGPYAFFACFAAANPGY---PFHP LMAA--------LPAFFAKSATIYNPVIYVFMNRQFRNCILQLF----------GKK-VD DGS-ELS-S-ASK-TEVSSVS---SVSPA------------------------------- ---------------------------------------------------------- > 10== Z68193 1 human Red Opsin <>[] ----------MAQQWSLQRLAGRHPQDSYEDSTQSSIFTY-------------------- ---------------------------TNSNSTRGPFEGPNY------------------ ----------------HIAPRW-------------------VYHLTSVWMIFVVTASVFT NGLVLAATMKFKKLRHPLNWILVNLAVADLAETVI-ASTISIVNQVS-GYFV--LGHPMC VLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWSAVWTA P-PIFG------WSR-----YWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLA IIM--------------LCYLQVWLAIRAVAKQQKESE---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEKEVTRMV----VVMIFAYCVCWGPYTFFACFAAANPGY---AFHP LMAA--------LPAYFAKSATIYNPVIYVFMNRQFRNCILQLF----------GKK-VD DGS-ELS-S-ASK-TEVSSVS---SVSPA------------------------------- ---------------------------------------------------------- > 11== M92036 1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92] ----------MTEAWNVAVFAARRSRDD-DDTTRGSVFTY-------------------- ---------------------------TNTNNTRGPFEGPNY------------------ ----------------HIAPRW-------------------VYNLVSFFMIIVVIASCFT NGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLV-ASTISVFNQIF-GYFI--LGHPLC VIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGNI-KFDSKLAIIGIVFSWVWAWGWSA P-PIFG------WSR-----YWPHGLKTSCGPDVFSGSVELGCQSFMLTLMITCCFLPLF III--------------VCYLQVWMAIRAVAAQQKESE---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEREVSRMV----VVMIVAFCICWGPYASFVSFAAANPGY---AFHP LAAA--------LPAYFAKSATIYNPVIYVFMNRQFRNCIMQLF----------GKK-VD DGS-EAS-T-TSR-TEVSSVS-NSSVAPA------------------------------- ---------------------------------------------------------- > 12== M62903 1 chicken visual pigment <>[BBRC173,1212-1217'90] ----------MA-AWE-AAFAARRRHEE-EDTTRDSVFTY-------------------- ---------------------------TNSNNTRGPFEGPNY------------------ ----------------HIAPRW-------------------VYNLTSVWMIFVVAASVFT NGLVLVATWKFKKLRHPLNWILVNLAVADLGETVI-ASTISVINQIS-GYFI--LGHPMC VVEGYTVSACGITALWSLAIISWERWFVVCKPFGNI-KFDGKLAVAGILFSWLWSCAWTA P-PIFG------WSR-----YWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLA III--------------LCYLQVWLAIRAVAAQQKESE---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------STQKAEKEVSRMV----VVMIVAYCFCWGPYTFFACFAAANPGY---AFHP LAAA--------LPAYFAKSATIYNPIIYVFMNRQFRNCILQLF----------GKK-VD DGS-EVS-T--SR-TEVSSVS-NSSVSPA------------------------------- ---------------------------------------------------------- > 13== S75720 1 chicken P-opsin <>[Science267(5203),1502-1506'95] ---------------------------------MSSNSSQ-------------------- ---------------------------APPNGTPGPFDGPQW------------------ ---------------PYQAPQS-------------------TYVGVAVLMGTVVACASVV NGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLC-GSSVSLSNNIN-GFFV--FGRRMC ELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGDF-QFQRRHAVSGCAFTWGWALLWSA P-PLLG------WSS-----YVPEGLRTSCGPNWYTGGSN--NNSYILSLFVTCFVLPLS LIL--------------FSYTNLLLTLRAAAAQQKEAD---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TTQRAEREVTRMV----IVMVMAFLLCWLPYSTFALVVATHKGI---IIQP VLAS--------LPSYFSKTATVYNPIIYVFMNKQFQSCLLEML-----CCGYQPQR-TG KAS-PGT-P-GPH-ADVTAAGLRNKVMPAH------------------------------ -----------P---------------------------------------------V > 14== M17718 1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87] ----------MESGN------------------VSSSLF--------------------- -------------------------------GNVSTALRPEA------------RLSA-- -ETRLLGWNVPPEELRHIPEHWLTYP----------EPPESMNYLLGTLYIFFTLMSMLG NGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSFH-QGYA--LGHLGC QIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIAMIIFIYMYATPWVV A-CYTET-----WGR-----FVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFSFVCPTT MIT--------------YYYSQIVGHVFSHEKALRDQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVESLRS------------------------------------------------ -----NVDKNKETAEIRIAKAA----ITICFLFFCSWTPYGVMSLIGAFGDKT---LLTP GATM--------IPACACKMVACIDPFVYAISHPRYRMELQKRCPWL--ALNEKAPE--- -SS-AVA-S-TSTTQEP-----QQTTAA-------------------------------- ---------------------------------------------------------- > 15== X65879 1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92 ----------MEYHN------------------VSSVL---------------------- -------------------------------GNVSSVLRPDA------------RLSA-- -ESRLLGWNVPPDELRHIPEHWLIYP----------EPPESMNYLLGTLYIFFTVISMIG NGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSFH-QGYA--LGHLGC QIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIAMIIFIYLYATPWVV A-CYTES-----WGR-----FVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFSFVCPTT MIT--------------YYYSQIVGHVFSHEKALRDQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVDSLRS------------------------------------------------ -----NVDKSKEAAEIRIAKAA----ITICFLFFASWTPYGVMSLIGAFGDKT---LLTP GATM--------IPACTCKMVACIDPFVYAISHPRYRMELQKRCPWL--AISEKAPE--- -SR-AAI-S-TSTTQEQ-----QQTTAA-------------------------------- ---------------------------------------------------------- > 16== M17730 1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87] ----------MEPLC--------------------------------------------- -------------------------------NASEPPLRPEA------------R-SSGN GDLQFLGWNVPPDQIQYIPEHWLTQL----------EPPASMHYMLGVFYIFLFCASTVG NGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSFH-RGFAIYLGNTWC QIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPWVV L-PLTQF-----WDR-----FVPEGYLTSCSFDYLSDN--FDTRLFVGTIFFFSFVCPTL MIL--------------YYYSQIVGHVFSHEKALREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVESLRS------------------------------------------------ -----NVDKSKETAEIRIAKAA----ITICFLFFVSWTPYGVMSLIGAFGDKS---LLTQ GATM--------IPACTCKLVACIDPFVYAISHPRYRLELQKRCPWL--GVNEKSGE--- -IS-SAQ-S-TTTQEQQ-----QTTAA--------------------------------- ---------------------------------------------------------- > 17== X65880 1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92 ----------MDALC--------------------------------------------- -------------------------------NASEPPLRPEA------------RMSSGS DELQFLGWNVPPDQIQYIPEHWLTQL----------EPPASMHYMLGVFYIFLFFASTLG NGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSFH-RGFA--LGNTWC QIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPWVV L-PLTQF-----WDR-----FVPEGYLTSCSFDYLSDN--FDTRLFVGTIFLFSFVVPTL MIL--------------YYYSQIVGHVFNHEKALREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVESLRS------------------------------------------------ -----NVDKSKETAEIRIAKAA----ITICFLFFVSWTPYGVMSLIGAFGDKS---LLTP GATM--------IPACTCKLVACIEPFVYAISHPRYRMELQKRCPWL--GVNEKSGE--- -AS-SAQ-S-TTTQEQT-----QQTSAA-------------------------------- ---------------------------------------------------------- > 18== D50584 1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1 ----------MTNAT-------------------GPQMAY-------------------- -----------------------------YGAASMDFGYPE-------------GVSIVD --------FVRPEIKPYVHQHWYNYP----------PVNPMWHYLLGVIYLFLGTVSIFG NGLVIYLFNKSAALRTPANILVVNLALSDLIMLTT-NVPFFTYNCFSGGVWM--FSPQYC EIYACLGAITGVCSIWLLCMISFDRYNIICNGFNGP-KLTTGKAVVFALISWVIAIGCAL P-PFFG------WGN-----YILEGILDSCSYDYLTQD--FNTFSYNIFIFVFDYFLPAA IIV--------------FSYVFIVKAIFAHEAAMRAQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVSTLRS------------------------------------------------ ------NEADAQRAEIRIAKTA----LVNVSLWFICWTPYALISLKGVMGDTS---GITP LVST--------LPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWF--CVHETETK-SN DDS-QSN-S-TVAQDKA------------------------------------------- ---------------------------------------------------------- > 19== D50583 1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1 ----------MANVT-------------------GPQMAF-------------------- -----------------------------YGSGAATFGYPE-------------GMTVAD --------FVPDRVKHMVLDHWYNYP----------PVNPMWHYLLGVVYLFLGVISIAG NGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTT-NFPPFCYNCFSGGRWM--FSGTYC EIYAALGAITGVCSIWTLCMISFDRYNIICNGFNGP-KLTQGKATFMCGLAWVISVGWSL P-PFFG------WGS-----YTLEGILDSCSYDYFTRD--MNTITYNICIFIFDFFLPAS VIV--------------FSYVFIVKAIFAHEAAMRAQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVTNLRS------------------------------------------------ ------NEAETQRAEIRIAKTA----LVNVSLWFICWTPYAAITIQGLLGNAE---GITP LLTT--------LPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWF--CVHEKDPN-DV EEN-QSS-N-TQTQEKS------------------------------------------- ---------------------------------------------------------- > 20== K02320 1 D.melanogaster opsin <>[Cell40,851-858'85] ----------MESFA--------------------------------------------- --------------------------------VAAAQLGPHFAPLS--------NGSVVD --------KVTPDMAHLISPYWNQFP----------AMDPIWAKILTAYMIMIGMISWCG NGVVIYIFATTKSLRTPANLLVINLAISDFGIMIT-NTPMMGINLYF-ETWV--LGPMMC DIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKM------------ --------------------YVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPLF LIC--------------YSYWFIIAAVSAHEKAMREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVKSLRS------------------------------------------------ ------SEDAEKSAEGKLAKVA----LVTITLWFMAWTPYLVINCMGLFKF-E---GLTP LNTI--------WGACFAKSAACYNPIVYGISHPKYRLALKEKCPCC--VFGKVDDG-KS SDA-QSQ-A-TASEAES-----KA------------------------------------ ---------------------------------------------------------- > 21== K02315 1 D.melanogaster ninaE <>[Cell40,839-850'85] ----------MESFA--------------------------------------------- --------------------------------VAAAQLGPHFAPLS--------NGSVVD --------KVTPDMAHLISPYWNQFP----------AMDPIWAKILTAYMIMIGMISWCG NGVVIYIFATTKSLRTPANLLVINLAISDFGIMIT-NTPMMGINLYF-ETWV--LGPMMC DIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSSIWCL A-PAFG------WSR-----YVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPLF LIC--------------YSYWFIIAAVSAHEKAMREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVKSLRS------------------------------------------------ ------SEDAEKSAEGKLAKVA----LVTITLWFMAWTPYLVINCMGLFKF-E---GLTP LNTI--------WGACFAKSAACYNPIVYGISHPKYRLALKEKCPCC--VFGKVDDG-KS SDA-QSQ-A-TASEAES-----KA------------------------------------ ---------------------------------------------------------- > 22== X65877 1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204' ----------MDSFA--------------------------------------------- --------------------------------AVATQLGPQFAAPS--------NGSVVD --------KVTPDMAHLISPYWDQFP----------AMDPIWAKILTAYMIIIGMISWCG NGVVIYIFATTKSLRTPANLLVINLAISDFGIMIT-NTPMMGINLYF-ETWV--LGPMMC DIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSTIWCC LAPVFG------WSR-----YVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPLF LIC--------------YSYWFIIAAVSAHEKAMREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVKSLRS------------------------------------------------ ------SEDADKSAEGKLAKVA----LVTISLWFMAWTPYLVINCMGLFKF-E---GLTP LNTI--------WGACFAKSAACYNPIVYGISHPKYRLALKEKCPCC--VFGKVDDG-KS SEA-QSQ-A-TTSEAES-----KA------------------------------------ ---------------------------------------------------------- > 23== M12896 1 D.melanogaster Rh2 <>[Cell44,705-710'86] ----------MERSH--------------------------------------------- ---------------------------LPETPFDLAHSGPRFQAQSSG------NGSVLD --------NVLPDMAHLVNPYWSRFA----------PMDPMMSKILGLFTLAIMIISCCG NGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMAS-QSPVMIINFYY-ETWV--LGPLWC DIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKILFIWMMAVFWTV M-PLIG------WSA-----YVPEGNLTACSIDYMTRM--WNPRSYLITYSLFVYYTPLF LIC--------------YSYWFIIAAVAAHEKAMREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVKSLRS------------------------------------------------ ------SEDCDKSAEGKLAKVA----LTTISLWFMAWTPYLVICYFGLFKI-D---GLTP LTTI--------WGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMC--VFGNTDEP-KP DAP-ASD-TETTSEADS-----KA------------------------------------ ---------------------------------------------------------- > 24== X65878 1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92 ----------MERSL--------------------------------------------- ---------------------------LPEPPLAMALLGPRFEAQTGG------NRSVLD --------NVLPDMAPLVNPHWSRFA----------PMDPTMSKILGLFTLVILIISCCG NGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMAS-QSPVMIINFYY-ETWV--LGPLWC DIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKIAFIWMMAVFWTI M-PLIG------WSS-----YVPEGNLTACSIDYMTRQ--WNPRSYLITYSLFVYYTPLF MIC--------------YSYWFIIATVAAHEKAMRDQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVKSLRS------------------------------------------------ ------SEDCDKSAENKLAKVA----LTTISLWFMAWTPYLIICYFGLFKI-D---GLTP LTTI--------WGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMC--VCGTTDEP-KP DAP-PSD-TETTSEAES-----KD------------------------------------ ---------------------------------------------------------- > 25== U26026 1 Apis mellifera long-wavelength rhodopsin <>[] ----------M------------------------------------------------- ----------------------------------IAVSGPSYEAFSYGGQARFNNQTVVD --------KVPPDMLHLIDANWYQYP----------PLNPMWHGILGFVIGMLGFVSAMG NGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFC-MSPPMVINCYY-ETWV--LGPLFC QIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSGK-PLSINGALIRIIAIWLFSLGWTI A-PMFG------WNR-----YVPEGNMTACGTDYFNRG--LLSASYLVCYGIWVYFVPLF LII--------------YSYWFIIQAVAAHEKNMREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVASLRS------------------------------------------------ ------SENQNTSAECKLAKVA----LMTISLWFMAWTPYLVINFSGIFNL-V---KISP LFTI--------WGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSL--AC-AAEPS-SD AVS-TTS-G-TTTVTDN-----EKSNA--------------------------------- ---------------------------------------------------------- > 26== L03781 1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93] ----------MANQL--------------------------------------------- ---------------------------------SYSSLGWPYQP----------NASVVD --------TMPKEMLYMIHEHWYAFP----------PMNPLWYSILGVAMIILGIICVLG NGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAF-MMPTMTSNCFA-ETWI--LGPFMC EVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAAA-PLTHKKATLLLLFVWIWSGGWTI L-PFFG------WSR-----YVPEGNLTSCTVDYLTKD--WSSASYVVIYGLAVYFLPLI TMI--------------YCYFFIVHAVAEHEKQLREQAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---KMNVASLRA------------------------------------------------ -----NADQQKQSAECRLAKVA----MMTVGLWFMAWTPYLIISWAGVFSSGT---RLTP LATI--------WGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSL--ACGSGESG-SD VKS-EAS-A-TTTMEEK-----PKIPEA-------------------------------- ---------------------------------------------------------- > 27== X07797 1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88] ----------MVESTTL----------------VNQTWWY-------------------- ------------------------------------------------------NPTV-- ----------------DIHPHWAKFD----------PIPDAVYYSVGIFIGVVGIIGILG NGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFM-KKWI--FGKVAC QLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVWSV G-PVFN------WGA-----YVPEGILTSCSFDYLSTD--PSTRSFILCMYFCGFMLPII IIA--------------FCYFNIVMSVSNHEKEMAAMAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---RLNAKELRK------------------------------------------------ -------AQAGASAEMKLAKIS----MVIITQFMLSWSPYAIIALLAQFGPAE---WVTP YAAE--------LPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKE-CE DAN-DAE-E-EVVASER--GG-ESRDAAQMKEMMAMMQKMQAQQAAYQP---PPPPQGYP PQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA > 28== X70498 1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93] ----------MGRDLR-----------------DNETWWY-------------------- ------------------------------------------------------NPSI-- ----------------VVHPHWREFD----------QVPDAVYYSLGIFIGICGIIGCGG NGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL-KKWI--FGFAAC KVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAI G-PIFG------WGA-----YTLEGVLCNCSFDYISRD--STTRSNILCMFILGFFGPIL IIF--------------FCYFNIVMSVSNHEKEMAAMAK--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---RLNAKELRK------------------------------------------------ -------AQAGANAEMRLAKIS----IVIVSQFLLSWSPYAVVALLAQFGPLE---WVTP YAAQ--------LPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE-TE DDK-DAE-T-EIPAGESSDAA-PSADAAQMKEMMAMMQKMQQQQAAYPPQGYAPPPQGYP PQGYPPQGY--PPQGYPPQGYPP---PPQGAPPQGAPP------AAPPQGVDNQAYQA > 29== L21195 1 human serotonin 5-HT7 receptor protein <placenta and fetal bra M---------MDVNS------------------SGRPDLYGHLRSFLLPEVGRGLPDLSP DG------------GADPVAGSW---------------APHLLS----------EVTAS- -----------------PAPTWDAPPDNASGCGEQINYGRVEKVVIGSILTLITLLTIAG NCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVA-VMPFVSVTDLIGGKWI--FGHFFC NVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITL P-PLFG------WAQ-----NVNDDKVCLIS----------QDFGYTIYSTAVAFYIPMS VML--------------FMYYQIYKAARKSAAKHKFPGF--------------------- ------------------------------------------------------------ --------PR----------------------VEPDSVIALNG----------------- ------------------------------------------------------------ -----------------------------------IV----------------------- ------------------------------------------------------------ ------------------------------------------------------------ ---KLQKE-------------------VEECA-NL-----------------SRLL---- --KHERKNISIFKREQKAATTL----GIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPL WVER--------TFLWLGYANSLINPFIYAFFNRDLRTTYRSLL-----QCQYRNINRKL SAA-GMH-E-ALKLAER-----PERPEFVL------------QNADYCR----------- -----KKGH--------------------------------------------DS--- > 30== L15228 1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93] ------------------------------------------------------------ --------------------------------------MPHLLSGF-------LEVTAS- -----------------PAPTWDAPPDNVSGCGEQINYGRVEKVVIGSILTLITLLTIAG NCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVA-VMPFVSVTDLIGGKWI--FGHFFC NVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITL P-PLFG------WAQ-----NVNDDKVCLIS----------QDFGYTIYSTAVAFYIPMS VML--------------FMYYQIYKAARKSAAKHKFPGF--------------------- ------------------------------------------------------------ --------PR----------------------VQPESVISLNG----------------- ------------------------------------------------------------ -----------------------------------VV----------------------- ------------------------------------------------------------ ------------------------------------------------------------ ---KLQKE-------------------VEECA-NL-----------------SRLL---- --KHERKNISIFKREQKAATTL----GIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPL WVER--------TCLWLGYANSLINPFIYAFFNRDLRPTSRSLL-----QCQYRNINRKL SAA-GMH-E-ALKLAER-----PERSEFVL------------QNSDHCG----------- -----KKGH--------------------------------------------DT--- > 31=p A47425 serotonin receptor 5HT-7 - rat ------------------------------------------------------------ --------------------------------------MPHLLSGF-------LEVTAS- -----------------PAPTWDAPPDNVSGCGEQINYGRVEKVVIGSILTLITLLTIAG NCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVA-VMPFVSVTDLIGGKWI--FGHFFC NVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITL P-PLFG------WAQ-----NVNDDKVCLIS----------QDFGYTIYSTAVAFYIPMS VML--------------FMYYQIYKAARKSAAKHKFPGF--------------------- ------------------------------------------------------------ --------PR----------------------VQPESVISLNG----------------- ------------------------------------------------------------ -----------------------------------VV----------------------- ------------------------------------------------------------ ------------------------------------------------------------ ---KLQKE-------------------VEECA-NL-----------------SRLL---- --KHERKNISIFKREQKAATTL----GIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPL WVER--------TCLWLGYANSLINPFIYAFFNRDLRTTYRSLL-----QCQYRNINRKL SAA-GMH-E-ALKLAER-----PERSEFVL------------QNSDHCG----------- -----KKGH--------------------------------------------DT--- > 32== M83181 1 human serotonin receptor <>[JBC267(11),7553-7562'92] ----------MDVLS--------------------------------------------- -----------------------------PGQGNNTTSPPAPFETG-------GNTTGIS ------------------------------------DVTVSYQVITSLLLGTLIFCAVLG NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVL-VLPMAALYQVL-NKWT--LGQVTC DLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISI P-PMLG------WRTPE---DRSDPDACTIS----------KDHGYTIYSTFGAFYIPLL LML--------------VLYGRIFRAARFRIRKTVKKVE--------------------- ----------------------------------KTGADTRHGASPAPQPKK-------- ---------------------------------------SVNG-ESGSRNWRLGVESK-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---AGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCA--PASFERKN ERNAEAKRKMALARERKTVKTL----GIIMGTFILCWLPFFIVALVLPFCESS--CHMPT LLGA--------IINWLGYSNSLLNPVIYAYFNKDFQNAFKKII-----KCKFCRQ---- ------------------------------------------------------------ ---------------------------------------------------------- > 33=p A35181 serotonin receptor class 1A - rat ----------MDVFS--------------------------------------------- -----------------------------FGQGNNTTASQEPFGTG-------GNVTSIS ------------------------------------DVTFSYQVITSLLLGTLIFCAVLG NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVL-VLPMAALYQVL-NKWT--LGQVTC DLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISI P-PMLG------WRTPE---DRSDPDACTIS----------KDHGYTIYSTFGAFYIPLL LML--------------VLYGRIFRAARFRIRKTVRKVE--------------------- ----------------------------------KKGAGTSLGTSSAPPPKK-------- ---------------------------------------SLNG-QPGSGDWRRCAENR-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---AVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYA--PACLERKN ERNAEAKRKMALARERKTVKTL----GIIMGTFILCWLPFFIVALVLPFCESS--CHMPA LLGA--------IINWLGYSNSLLNPVIYAYFNKDFQNAFKKII-----KCKFCRR---- ------------------------------------------------------------ ---------------------------------------------------------- > 34== L06803 1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93] MANFTFGDLALDVARM-----------------GGLASTPSGLRS-----TGLTTPGLSP TGLVTSDFNDSYGLTGQFINGSHSSRSRDNASANDT------------------SATNM- -----------------TDDRYWSLT----------VYSHEHLVLTSVILGLFVLCCIIG NCFVIAAVMLERSLHNVANYLILSLAVADLMVAVL-VMPLSVVSEIS-KVWF--LHSEVC DMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFISI P-PLFG------WRDPN--NDPDKTGTCIIS----------QDKGYTIFSTVGAFYLPML VMM--------------IIYIRIWLVARSRIRKDKFQMT-------KARLKTEETTLVAS P---------KTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKK-------- --------NRAKKL------------------PENANGVNSNS----------------- --SS-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------SERLK------- ---QIQIETAEAFANGCAEEASIAML-ERQCNNGKKISSNDTPY---------------- ---SRTREKLELKRERKAARTL----AIITGAFLICWLPFFIIALIGPFVDPE---GIPP FARS--------FVLWLGYFNSLLNPIIYTIFSPEFRSAFQKIL-----FGKYRRGHR-- ------------------------------------------------------------ ---------------------------------------------------------- > 35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail MANFTFGDLALDVARM-----------------GGLASTPSGLRS-----TGLTTPGLSP TGLVTSDFNDSYGLTGQFINGSHSSRSRDNASANDT------------------SATNM- -----------------TDDRYWSLT----------VYSHEHLVLTSVILGLFVLCCIIG NCFVIAAVMLERSLHNVANYLILSLAVADLMVAVL-VMPLSVVSEIS-KVWF--LHSEVC DMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFISI P-PLFG------WRDPN--NDPDKTGTCIIS----------QDKGYTIFSTVGAFYLPML VMM--------------IIYIRIWLVARSRIRKDKFQMT-------KARLKTEETTLVAS P---------KTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKK-------- --------NRAKKL------------------PENANGVNSNS----------------- --SS-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------SERLK------- ---QIQIETAEAFANGCAEEASIAML-ERQCNNGKKISSNDTPY---------------- ---SRTREKLELKRERKAARTL----AIITGAFLICWLPFFIIALIGPFVDPE---GIPP FARS--------FVLWLGYFNSLLNPIIYTIFSPEFRSAFQKIL-----FGKYRRGHR-- ------------------------------------------------------------ ---------------------------------------------------------- > 36== X95604 1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi ----------MEGAE-------------------GQEEL--DWEA-----LYLRLP---- ---------------------------LQNCSWNSTGWEPNW------------NVTVV- -----------------PNTTWWQAS-----APFDTPAALVRAAAKAVVLGLLILATVVG NVFVIAAILLERHLRSAANNLILSLAVADLLVACL-VMPLGAVYEVV-QRWT--LGPELC DMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGMMIACVWTVSFFVCI A-QLLG------WKDPDWNQRVSEDLRCVVS----------QDVGYQIFATASSFYVPVL IIL--------------ILYWRIYQTARKRIRRRRGATA--------------------- ----------------------------------------RGGVGPPPVPAG-------- -----------------------------------GALVAGGG----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------SGGIAAAVVAVI-----GRPLP------- ---TISETTTTGFTNVSSNNTSPE---KQSCANGLEADPPTTGYGAVAAAYYPSLV---- --RRKPKEAADSKRERKAAKTL----AIITGAFVACWLPFFVLAILVPTCD----CEVSP VLTS--------LSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLL-----CGRRVRRRRA- ----------------------PQ------------------------------------ ----------------------------------------------------------