view test-data/seed.aln @ 18:0a507f4bd19a draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 3216eed8c66b2fff7c571ab27d3f1e6aaddc186f
author bgruening
date Mon, 14 Jul 2025 18:16:36 +0000
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>PINI_ARATH/9-617
HVMTAMVPLYVAMILA-YGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPYAMNLRFLAADSLQK
VIVLSLLFLWCKLSR---NGSLDWTITLFSLSTLPNTLVMGIPLLKGMYGN-------------------FS
GDLMVQIVVLQCIIWYTLML------------------FLFEYRGAKLLISEQFP-DTAGSIVSIHVDSDIM
SLDGRQ-PLETEAEIKEDGKLHVTVRRSNASRSDIYS-----RRSQGL-SATPRPSNLTNAEIYSLQSSRNP
TPRGSSFNHTDFY---------------SMMASGGGRNSNFGPGEA---------------VFGSKGPTPRP
SNYEEDGGPAKPTAAGTAAGAGRFHYQSGGSGGGGGAHYPAPNPGMFSPNTGGGGGTAAKGNAPVVGGKRQD
GN------GRDLHMFVWSSSASPVSDVFGGGGGNHHADYSTATNDHQKDVKISVPQGNSNDNQYVEREEFSF
GNKDDDSKVLATDGGNNISNKTTQAKVMPPTSVMTRLILIMVWRKLIRNPNSYSSLFGITWSLI-SFKWNIE
MP------------ALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFA--------AAMRFVV
GPAVMLVASYAVGLRGV-LLHVAIIQ------------AALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIA
LPITLLYY
>Q9FVF6_POPPZ/9-609
HVMTAMVPLYVAMILA-YGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNDPYNMNLRFITADSLQK
VIVLVVLALWTKLSK---RGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGD-------------------YS
GSLMVQVVVLQCIIWYTLML------------------FMFEYRGAKLLISEQFP-DTAGSIVSIHVDSDIM
SLDGRQ-PLETEAAIKEDGKLHVTVRKSNASRSDIFS-----RRSQGLSSTTPRPSNLTNAEIYSLQSSRNP
TPRGSSFNHTDFY---------------SMMA--AGRNSNFGASDVY-------------GLSASRGPTPRP
SNFEEEHGGSNKPRFHHYHAPGGATHYPAPNPGMFSPTTAASKGVSANANNAAAAAAKKPNGQAQQKAED--
-----------GRDLHMFVWSSSASPVSDVFGGHDYGAHDLKDVRVAVSPGKVEGQRENQEDYNLERDDFSF
GNRGLDRERNSHEGEKGGFD--GKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLV-SFRWNVK
MP------------LIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIATFS--------MAVRFLT
GPAIMAAASIAVGIRGT-LLHIAIVQ------------AALPQGIVPFVFAKEYNVHPEILSTGVIFGMLIA
LPITLVYY
>B8AIF2_ORYSI/9-590
HVMTAMVPLYVAMILA-YGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQK
LMVLAMLTAWSHLSR---RGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGE-------------------FS
GSLMVQIVVLQCIIWYTLML------------------FMFEYRGARMLITEQFP-DTAANIASIVVDPDVV
SLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYS-----RRSMGFSSTTPRPSNLTNAEIYSLQSSRNP
TPRGSSFNHTDFY---------------SMV----GRSSNFGAADA---------------FGVRTGATPRP
SNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSSAPKGAKKAATNGQAKGEDLHMFVWSS-----------
--------------------SASPVSDVFGGGAPDYNDAAAVKSPRKMDGAKDREDYVERDDFSFGNRGVMD
RDAEAGDEKAAAAAGADPSKAMAAPTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLV-CFRWNFE
MP------------AIVLKSISILSDAGLGMAMFSLGLFMALQPHIIACGNKVATYA--------MAVRFLA
GPAVMAAASFAVGLRGT-LLHVAIVQ------------AALPQGIVPFVFAKEYSVHPSILSTAVIFGMLIA
LPITLVYY
>PIN6_ARATH/9-565
TVMCAMAPLYFAMFVA-YGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFISQNNPYKMDTMFILADTLSK
IFVFVLLSLWAVFFK---AGGLDWLITLFSIATLPNTLVMGIPLLQAMYGD-------------------YT
QTLMVQLVVLQCIIWYTLLL------------------FLFELRAARLLIRAEFPGQAAGSIAKIQVDDDVI
SLDGMD-PLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLC--------LTPRASNLSNAEIFSVN-----
-----TPNNRFFHGGGGSGTLQFYNGSNEIMF-CNGDLGGFGFTRPGLGASPRRLSGYASSDAYSLQPTPRA
SNFNELDVNGNGTPVWMKSPAAGRIYRQSSPKMMWESGQRHAAK----------------------------
--------------------------------------DINGSVPEKEISFRDALKAAPQATAAGGGASMEE
GAAGKDTTPVA-AIG-K-QE-------MPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLI-SFKWNIP
MP------------NIVDFSIKIISDAGLGMAMFSLGLFMALQPKMIPCGAKKATMG--------MLIRFIS
GPLFMAGASLLVGLRGS-RLHAAIVQ------------AALPQGIVPFVFAREYNLHPDLLSTLVIFGMIVS
LPVTILYY
>YFDV_ECOLI/4-307
FFIGDLLPIIVIMLLG-YFSGRR-ETFSEDQARAFNKLVLNYALPAALFVSITRANREMIFADTRLTLVSLV
VIVGCFFFSWFGCYK-FFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGD----------------SVSTG
LVVAIISIIVNAITIPIGLY------------------LLNPSSGADGKK----------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------NSNLSALISAAKEPVVWAPVLATILVLV-GVKIP--
--------------AAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYN-----------TFLKLIL
MPLALLLVGMACHLNSE-HLQMMVLA------------GALPPAFSGIIIASRFNVYTRTGTASLAVSVLGF
VVTAPLWI
>YWKB_BACSU/5-315
DILILLAPIFFVIVLG-WFAGHF-GSYDAKSAKGVSTLVTKYALPAHFIAGILTTSRSEFLSQVPLMISLII
GIVGFYIIILLVCRF-IFKYDLTNSSVFSLNSAQPTFAFMGIPVLGSLFGA-------------------NE
VAIPIAVTGIVVNAILDPLA------------------IIIATVGESSKKNEESGD----------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------SFWKMTGKSILHGLCEPLAAAPLISMILVLVFNFTLP--
--------------ELGVKMLDQLGSTTSGVALFAVGVTVGIRKIKLSMPAIG-----------IALLKVAV
QPALMFLIALAIGLPADQTTKAILL-------------VAFPGSAVAAMIATRFEKQEEETATAFVVSAILS
LISLPIII
>P71425_KLEPN/4-313
VIIHALAPIFVIMLLG-FWAGKA-GMVDNKNVSLLNIFVMDFALPATLFSATVQTPWAGIVAQSPLVLVLTG
AMWITYAAIYFLATS-VFKRTPQDGAVLTLTVALPNYAALGLPILGSVLGE------------------GAS
TSLSVAVSIACGSVLMTPFC------------------LLILEREKARAAGENSG-----------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------STLAMLPVLMWRSVKKPIVWGPLLGVVLSAI-GIKMP--
--------------DLLLASIKPLGLAATAAALFLTGVILSARKLQLNALIAAS-----------TIVKLLV
QPFIAWGLVMLLGLHGSIAITAILM-------------IALAAGFFGVVFGNRFGVQSPDAEAVLLLSSVLC
ILSLPLFI
>Q98L58_RHILO/3-308
PLTETVLFVFSLVALG-YLAGLT-GYLRPASGEGISDFAVSVAMPLLLFQTMVKADFHG--VAPWPLWGAYF
TAVAITWAAGHLVTTRIFGRDARAGVVGGVSSAYSNVVLLGAPFILGIFGP-----------------SGFE
VLSLLVSVHLPVMMMASIVL------------------FEMFGRGGGEHV----------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------HPLRVLRSFLRRLFINPLIIGILLGLAWRLS-GVPLP--
--------------SLVMRLVDALANTAGPVALFAMGLSLRRFGVSGNVRPALA----------LSALKLFL
MPALVLAFVLLLGLPPL-TAKVAVVV------------AALPSGINSYLIAVQFNTGQALASNQMTIATACA
AVTTAFWL
>O67397_AQUAE/2-289
FIYEKVFFILLIIAFA-YTLKRG-GIFKEEHALPFINYVIYFALPFTIFKNLRF---LEIGKEVLGVVLIAW
GAIFLSILFAFLFGK-FLKLEEKTLRAFLLVSSFGNTAFMGYPFLYALEGN-------------------EG
LKYAILYDQLGSFLMVITLG----------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------LFLAIGKFDLKELILFPPFIALVLSFLLHGV-RFP----
--------------QFFEHSVEIISGSLIPVILFSLGLRLNFTDMKSDYRTLFSA----------LFIKMFL
VPLLILVFLKIFGLTSL-PYRVALIE------------SAMPPMVFAGVLALKYELDFRLAFSAITLGIVIS
LFTVPVFR
>Q97M34_CLOAB/2-296
YVFEQIVILFLIMGIG-YYAAKS-KIIDDDTTSHLSNFIVSITLPLMILTSFNVEYSRKTVITIINLLVFSV
AAFIISIVIGKII---SFKFAMDKRDILMFMSIFSNCGFIGFPVLKVVYGN-------------------KG
VLYTSIFNLVYNVFIWTIGI------------------VIINDKREKIDY----------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
-------------------------------------------KKILFNHNIIAVIVGVFLMLL-SIKIP--
--------------YVMSSAFNLIGSMTAPLSMIVIGSILA--------GVDFNDIFKDWSLYYIAILRLII
IPLIIYFALKPFQINKI-VIGVIIIC------------EAMPGGTLCPILAKSCNRNFKYASKIVLITTILS
MMTIPFMT
>YB8B_YEAST/13-413
LVFESVLQVVIIALAG-FWSASS-GLLPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIAIIPIFFG
LTTGISFISGKIMSR-ILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPNLTWDQIPNDNRDNVASRG
ILYLLIFQQIGQMLRWSWGY------------------NKLMKWSGENTQHMPPSQVQSLLERTPNIDNEEL
VNEEQEEQELLEEENNRMNSSFLSSSSIGDKIWQKSCTVFER------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
-------------------------------------------IRANLNPPLYSMIFAVVVAAI-GPLQREL
F------MEDGFINNTFAEAVTQLGSVSIPLILVVLGSNLYPSA-----EVFPKTVHHSKLLIGSIIGRMIL
PSCFLLPIIAIAV-----KYINVSILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVL
SLPVSIIV
>YDQ4_SCHPO/18-440
PIIESDLEVIVIALGG-YVLAKK-GFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMLIDLSLLPVFYV
IISAASILISFLLAK-LFRLTPRQRNFATACITFQNSNSLPLALVSSLATTVKDLLWDKIPDDTPDKVASRG
IMYLLIFSQLGQALRWSYGY------------------RILLSPNQPEDPLPIGNRSWSHSDVNEEEIQNLL
ASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQVETSNEEVGGFGAASSKISK-----------------
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------------FIVLLLDFFSPPLYSLFIALFIAVV-PPLQRFF
F------EEGSFVEGSITSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVIIVCLLGRMVV
VPLALLPAFSLLS-----YFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWWSYAVF
TPPNSLLL
>PILS4_ARATH/9-407
ASSKPVVETLLITSVGFYLALDTVNLLGHDARKHLNNIVFYVFSPSLIGSRLADSVTYESLVKMWFMPVNVL
LTFMIGSLLGWIVIV-ITKPPSQLRGLIISCCASGNLGTMPLIIIPAICKE------KGGPFGDSESCEKYG
MGYVTLSMT--AFFISVYKHDTNWYVSGGNGLLMDLYINLMR------VLSNSPVETHTHSIESNYDDSCKV
QLISSK------------------------------------------EEEKEEDNHQVGRWEEVKQ-----
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------RVVSLSKKVNLGSIFAPATIAAIIALVIGLI-TPLRNLI
IGTVAPF-------RVIQDSLTLLGDGAIPAMTLILGGNLLKGMRRSEVRSSEMKNSCIIGV---LVARYIL
LPVSGVLLVRGAY------KLDLVTS-EPLYQFVLLLQYAVPPAMNLGTKTQLFGAGESECSVIMLWTYSLA
AVSLTVWP
>PILS5_ARATH/9-388
VASMPVIQVLFMSLVGAFMASDRCKLFPVEARNSMNKVVFVLFAPALMFANLAQTVTLEDIISWWFMPVNMG
LTFLIGGLLGWLVVK-ILKPPPYLEGLIVATCSAGNMGNLPIILVPAICDE------DKSPFGNRSVCRTVG
LSYASFSMALGGFYIWTYTF------------------RLIKGSAMKVQAIEESEKIAIKSSNSDLEADHKT
HLLGAP-----------------------------------------EDKENKVVKEKTGFWRKGVD-----
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------FLHEI-----LEELLAPPTLGAIIGFIFGAV-RWLRNLI
IGDDAPL-------RIVQSTAKLLGDGTIPCMTIILGGNLIQG-----LRSSAVKPMVVLGI---VCVRYIA
MPIIGIGIVLTAA------NLGFLPA-DPLFQYVLMLQFTLPPAMNIGTMTQLYNVAQDECSVLMLWTYLVA
ILALTVWS
>PILS2_ARATH/18-441
SGVVPLLKLICLTVIGLLLAHPKTQLVPRATFRLLSKLVFALFLPCLIFTELGESITLDNIVQWWFIPVNVL
LSAVVGSLIGYLVVL-ICRPPPEFNRFTIVMTAFGNTGNLLLAIVSSVCHT--------KTNPFGPNCNSRG
VSYVSFAQWVAVILVYTVVY------------------HMMEPPLEYYEVVEEEG-VEIEEINVENHDASRP
LLVEAEWPGIEDKETEHCKTPFIARVFNSISSFSQTSFPEVDLGGEYGGESSSPRSIQCLAEPRVMR-----
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------RIRVVAEQTPVKHILQPPTIASLLAIIIGSV-PQLKSVV
FGYDAPL-------SFITDSLNIMGSAMVPSVMLVLGGMLSEGPNESTLGLRTTIGI--------SVARLLV
LPLVGIGIVMSAD------KLGLISSADPMFKFVLLLQYSTPSAILLGAIASLRGYAVREASALLFWQHIFA
LLSLTFYI
>PILS6_ARATH/30-423
IAVMPIAKVFTMCFLGLLMASKYVNILPPSGRKLLNGLVFSLLLPCLIFSQLGQAVTLQKMLQWWFIPVNVV
LGTISGSIIGFIVAS-IVRPPYPYFKFTIIQIGVGNIGNVPLVLLAALCRD------TSNPFGDSEKCSIDG
TAYISFGQWVGAIILYTYVY------------------QMFAPPPEGFDAEEENLALKTLPVDAAPEQVPLL
TQNFPKDFSPTQDL--------------------------------LPVQSTEPRGRGVSRKGKIAQ-----
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------------------
---------------------------------IFVFLYEKLKLKQIVQPAIVASILAMILGAI-PFTKKLI
FTNGAPL-------FFFTDSCMILGDAMIPCILLALGGNLINGPGSSKLGFKTTAAI--------IIGRLVL
VPPVGLGIVTVAD------KLGFLPADDKMFRFVLLLQHTMPTSVLSGAVANLRGCG-RESAAVLFWVHIFA
IFSMAGWM
>PIN4_ARATH/9-611
TVLTAVVPLYVAMILA-YGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNFRFVAADTLQK
IIMLVLLALWANLTK---NGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGT-------------------YA
GSLMVQVVVLQCIIWYTLLL------------------FLFEYRGAKLLIMEQFP-ETGASIVSFKVESDVV
SLDGHD-FLETDAEIGNDGKLHVTVRKSNASRRSLMM--------------TPRPSNLTGAEIYSLS----S
TPRGSNFNHSDFY---------------SVMGFPGGRLSNFGPADLY-------------SVQSSRGPTPRP
SNFEENNAVKYGFYNNTNSSVPAAGSYPAPNPEFSTGTGVSTKPNKIPKENQQQLQEKDSKASHDAKELHMF
VWSSSASPVSDVFGGGAGDNVATEQSEQGAKEIRMVVSDQPRKSNARGGGDDIGGLDSGEGEREIEKATAGL
NKMGSNSTAELEAAG-G-DGGGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWALV-AYRWHVA
MP------------KILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFA--------MAVRFIT
GPAIMAVAGIAIGLHGD-LLRIAIVQ------------AALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIA
LPITLVYY
>PIN7_ARATH/9-614
TVLTAVIPLYVAMILA-YGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNLRFIAADTLQK
LIMLTLLIIWANFTR---SGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGE-------------------YS
GSLMVQIVVLQCIIWYTLLL------------------FLFEYRGAKILIMEQFP-ETGASIVSFKVESDVV
SLDGHD-FLETDAQIGDDGKLHVTVRKSNASRRSFYG--------GGGTNMTPRPSNLTGAEIYSL----NT
TPRGSNFNHSDFY---------------SMMGFPGGRLSNFGPADMY-------------SVQSSRGPTPRP
SNFEESCAMASSPRFGYYPGGAPGSYPAPNPEFSTGNKTGSKAPKENHHHVGKSNSNDAKELHMFVWGSNGS
PV-----SDRAGLQVDNGANEQVGKSDQGGAKEIRMLISDHTQNGENKAGPMNGDYGGEEESERVKEVPNGL
HKLRCNSTAELNPKEAIETGETVPVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWALV-AFRWDVA
MP------------KIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFA--------MAVRFFT
GPAVMAVAAMAIGLRGD-LLRVAIVQ------------AALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIA
LPITLVYY