annotate test-data/cel_cluster.fa @ 3:5cecae70d439 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mirdeep2/mirdeep2 commit 3103ebed1a420c7d3415b67ef532ea579edf9faa
author rnateam
date Wed, 12 Jul 2017 14:37:54 -0400
parents eaac585f172a
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
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1 >chrII:11534525-11540624
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2 tccaaaatattagaggccccacgaaaaggggagcagaacgaaaaggggat
eaac585f172a Imported from capsule None
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diff changeset
3 ctgcaaaaaggggatctgcgaaaaggggagatacgaaaaggggagatacg
eaac585f172a Imported from capsule None
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4 aaaaggggagcaacgaaaaggggatctggcactgtgccaaacgctatttt
eaac585f172a Imported from capsule None
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parents:
diff changeset
5 tctcaaagaaaacaatacaacgatgctccgatgttacgcgtcgcgtgttg
eaac585f172a Imported from capsule None
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parents:
diff changeset
6 ttaagcgtatcttctagaagaaaatttcaaaaatcaacgtgcgttgcgtg
eaac585f172a Imported from capsule None
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parents:
diff changeset
7 agaaaaattgcgttttgtgcgtttggcacagtgccagctccccttttcgt
eaac585f172a Imported from capsule None
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parents:
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8 tgctccccttttcgtatctccccttttcgtatctccccttttcgcagatc
eaac585f172a Imported from capsule None
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parents:
diff changeset
9 ccctttttgcagatccccttttcgttctgctcccctcgtggggcctcaaa
eaac585f172a Imported from capsule None
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parents:
diff changeset
10 taatattgtcaatggagcgcagttgcgcacaccgaaatacgcacgaaatt
eaac585f172a Imported from capsule None
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11 tgaaattggcaggcctagaaagtctggatttaaaatatttatgcatatta
eaac585f172a Imported from capsule None
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12 acctgagtttcggcatgtttagataaatttagattaaaatttattaaata
eaac585f172a Imported from capsule None
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13 aaaatatttaaaatttattaaattcaacattatctttaattttacagaaa
eaac585f172a Imported from capsule None
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14 taaaaaccaaaaaaccaacgaagtgtaacttttcgacaataaatatttat
eaac585f172a Imported from capsule None
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parents:
diff changeset
15 aaattattcaattaattggaaatctatttatcacatctcatcgtgaacaa
eaac585f172a Imported from capsule None
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16 gcacatggctaaacaatgcctcgactttatccacccatcctggatttttc
eaac585f172a Imported from capsule None
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17 ctgttgaaaatcttcaaatccttcatagtctgctcaattgccttaacagc
eaac585f172a Imported from capsule None
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18 cttttcccttttcacatccttcgtcaattcctcaaccatcgcctctacaa
eaac585f172a Imported from capsule None
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diff changeset
19 gttgtgatcgtgaggccccttcaacgaatttcttgtccaatacatctctg
eaac585f172a Imported from capsule None
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20 agctgaaaaataagtccctttattcatgtgcaccacctgccactcattca
eaac585f172a Imported from capsule None
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21 ttttagatcctaatcctgtatttctctctctctctcactaatcgtcccgt
eaac585f172a Imported from capsule None
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22 catatctgacccactataatgaggggaccaccactttgccccagatttcg
eaac585f172a Imported from capsule None
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23 taatgagccaacatacactaggccctgttctagcacccccattgtgcatg
eaac585f172a Imported from capsule None
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24 ggagacacatcgtctgttggttcgggtcagctgagatgacgtggcagatg
eaac585f172a Imported from capsule None
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parents:
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25 acgtcatgtttgttctctagcagatccctatcgtaaaataccgttctttg
eaac585f172a Imported from capsule None
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26 ttcgtttatgagcacttcttgggaaacaagaagaatattagagaatattg
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27 gattttaggaaatttcttgaccctaataatatgtatctcatggggctaat
eaac585f172a Imported from capsule None
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28 tacgaaagatttagagctcactaaagcagatgtggataagctggaactat
eaac585f172a Imported from capsule None
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29 agtcaattctcacgagatattattattagcttactcgttgaatttgatgc
eaac585f172a Imported from capsule None
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30 cgtgttaggtagaagccgagaacacgatgaaccttggaagttatgtagtc
eaac585f172a Imported from capsule None
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31 gagttttctggaagaaaaagtatatatagtttgataaaaagttacgtcat
eaac585f172a Imported from capsule None
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32 aagttattggtcccgagtgtgtacactagaaacttgcgcaatcagttggt
eaac585f172a Imported from capsule None
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33 caggtggtctaggacctttacatgtaatataattcattggtttgttgctc
eaac585f172a Imported from capsule None
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34 tagatctcaaagaatatggttttcctgctgagaaacaaaatttttttttc
eaac585f172a Imported from capsule None
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35 aaatgttcgcgatattatacgatttttttgcgctgaaaaatacggtatcc
eaac585f172a Imported from capsule None
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36 ggactcgacacgacagtttttcaataaattcggaaaggtacatatgcgcc
eaac585f172a Imported from capsule None
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diff changeset
37 tttgaagagtactgtaattttaaacatttgttgatgcagtaaatattctc
eaac585f172a Imported from capsule None
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38 acggatttttagaggtttttttttgaatatttatacagttatattagagt
eaac585f172a Imported from capsule None
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39 taaaaaaataaatctatttttatcgaaatttatgaaaaatctactcccca
eaac585f172a Imported from capsule None
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40 gaaacaaagtttgaatttacttaaaatgtatgtgcgcctttttaaattca
eaac585f172a Imported from capsule None
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diff changeset
41 acaaaaatttatcaaattttgtctttttaatcacttttacttttttttcg
eaac585f172a Imported from capsule None
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diff changeset
42 aaaaaaaaaaaaactttaaaaacaccgaaaattaaaatttttaattaccg
eaac585f172a Imported from capsule None
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43 taatcctttaaaggcgcacacctctttttcgcaatcataaaaatttacag
eaac585f172a Imported from capsule None
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44 gcacagaatttcctactgtaacgtgttttctcgatagaaacgtttctcca
eaac585f172a Imported from capsule None
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45 aatcgaaatttttattagcaatcatcaattcgtcatgtttctgtgctgga
eaac585f172a Imported from capsule None
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46 gcacattgttatgcagtgctcatgaatattcacagttgaaaatcgaattt
eaac585f172a Imported from capsule None
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47 ttttttcttatttttattaacttctctcctcactcaagtgcaatctcatt
eaac585f172a Imported from capsule None
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48 tcggcggaacgatgaaagcggactcgtttgaaacggattacactgctggc
eaac585f172a Imported from capsule None
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49 tggctccatcttttttatttctggtttttttcccgacacgggaggtcatc
eaac585f172a Imported from capsule None
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50 cgtccacgtcttcaatcttattcgcttctccttctatctatctctcttcc
eaac585f172a Imported from capsule None
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51 aaaaaaatggaacagattgtccgccttctactttccgcatgcgcctattc
eaac585f172a Imported from capsule None
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52 tagacatcgagaagaagcgagagaatccgaaaaactccgccgtccggcgc
eaac585f172a Imported from capsule None
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53 ctagcgttcatcccgtcgcatccaatttccttcacccctgtctccagtct
eaac585f172a Imported from capsule None
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54 ctaatctgtgtttcccagaccttctccttcttcttctcccctctttcttc
eaac585f172a Imported from capsule None
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55 cctttcttttctacgattcctagacctgcccggttgaccatcgggcccac
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56 catttatcgagcgcgtccgtctgttcgttgctgtgagcgcgcgcgcgcga
eaac585f172a Imported from capsule None
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57 gcgcacactgcacaccatttgaccgcaacgagccgagagagtgtgtgaaa
eaac585f172a Imported from capsule None
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58 tgaagagacgccgagtggacacgttgctctacaccaaacgcgctacacca
eaac585f172a Imported from capsule None
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59 aatgggcggagacccaatggtgcaccaagtcagcagtataaaaggaatgg
eaac585f172a Imported from capsule None
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60 aaatggtccattcagtcatcagttgtttttttattttctcttttctccca
eaac585f172a Imported from capsule None
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61 tcactttctcccttcttcccctctcctaatttccattcccaactattatt
eaac585f172a Imported from capsule None
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62 ctcggatcagatcgagccattgctggtttcttccacagtggtactttcca
eaac585f172a Imported from capsule None
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63 ttagaactatcaccgggtggaaactagcagtggctcgatcttttccactt
eaac585f172a Imported from capsule None
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64 gctccaccgctgtcggggaaccgcgccaattttcgcttcagtgctagacc
eaac585f172a Imported from capsule None
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65 atccaaagtgtctatcaccgggtgaaaattcgcatgggtccccgacgcgg
eaac585f172a Imported from capsule None
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66 aaagataaaatatcttaaaatcgattctagaaacccttggaccagtgtgg
eaac585f172a Imported from capsule None
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67 gtgtccgttgcggtgctacattctctaatctgtatcaccgggtgaacact
eaac585f172a Imported from capsule None
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68 tgcagtggtcctcgtggtttctctgtgagccaggtcctgttccggttttt
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69 tccgtggtgataacgcatccaaaagtctctatcaccgggagaaaaactgg
eaac585f172a Imported from capsule None
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70 agtaggacctgtgactcattccgatttctggagttttcccctacattcta
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71 ccattcagctactgattattgaattcctgatataccgagagcccagctga
eaac585f172a Imported from capsule None
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72 tttcgtcttggtaataagctcgtcattgagattatcaccgggtgtaaatc
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73 agcttggctctggtgtctccgaacctcctgtccgcacctcagtggatgta
eaac585f172a Imported from capsule None
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74 tgccatgatgataagatatcagaaatcctatcaccgggtgtacatcagct
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75 aaggtgcgggtacaggtgcatttgatatcaaggtgagttatttttaagtg
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76 ggtcccagagaccttggtggtttttctctgcagtgatagatacttctaac
eaac585f172a Imported from capsule None
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77 aactcgctatcaccgggtgaaaaatcacctaggtctggagcctcctgctc
eaac585f172a Imported from capsule None
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78 tttttttgctgtttttaaacttaaacttaaaactaacactttatcaaaat
eaac585f172a Imported from capsule None
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79 aaagtcttccaaaatcttttttctgatctgccggaagactttccatgaat
eaac585f172a Imported from capsule None
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diff changeset
80 ttgtccaaaactcgttgcactttatcctcgtcgtaatcatttgacaccat
eaac585f172a Imported from capsule None
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81 atctttggataactagaataattgaacattggtttaaaaaaattctctca
eaac585f172a Imported from capsule None
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82 aaaaaaaaatcacaaacctgatgaattttagcctcatctatagcagtatc
eaac585f172a Imported from capsule None
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83 tgcgagaagaatcgtaagattcattgataattctatatattttccaataa
eaac585f172a Imported from capsule None
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84 ttttatccgaagctggatgtgaagtttctacagtacctccgtggcataat
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85 actacaatggaagcaaaaagagcgacaattaggatcgtcattttagtgga
eaac585f172a Imported from capsule None
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86 gaatgatgaattgacccggctctttgggggttggaggattcattttcccc
eaac585f172a Imported from capsule None
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87 ttcaacaggtgctcaaataattaaagagaatagaaccgacgatatatggg
eaac585f172a Imported from capsule None
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88 tcaaatgtttatacagttgtgctactaaacgtattgttacacgcgttatt
eaac585f172a Imported from capsule None
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89 aataattagaattagaattatatcgttttgtacggattgagaatcccatt
eaac585f172a Imported from capsule None
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diff changeset
90 tgggtcgaaaatgttcttgagcttctttgtcaaaagtcgttcttcaggat
eaac585f172a Imported from capsule None
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diff changeset
91 cttttccgaatgtggagtacggtagcttcagttgaccgattccatgttca
eaac585f172a Imported from capsule None
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parents:
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92 gctgaaattgacccgccgtgatcgacaacccattcgtagaggaagggata
eaac585f172a Imported from capsule None
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93 gagcctggaatttgaaattattaatagaattaaaattttataaaaaagaa
eaac585f172a Imported from capsule None
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94 aaatctcgaaacttacaatttttcaagttcttcattgtgtttttcagatg
eaac585f172a Imported from capsule None
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95 taatatttaaatgagtgtttccatctcccaaatgtccataagtgacaatt
eaac585f172a Imported from capsule None
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96 cttttagccaaagaaccacatcgttccttcatcacattcgtcaattcata
eaac585f172a Imported from capsule None
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97 ataattttccaatggtaaagaaacatcatgcttatagacatatccatctc
eaac585f172a Imported from capsule None
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98 tggtaaccgccaatggtgcactttctctcaattgccacatcttcgtagct
eaac585f172a Imported from capsule None
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99 tctgcagaagatccagcgagcactccgtcgataatcagattttttgagag
eaac585f172a Imported from capsule None
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diff changeset
100 gcattcatccaaaaatgcgctcattttctccatatcgtgatcttcattgg
eaac585f172a Imported from capsule None
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parents:
diff changeset
101 atcctgatgtttcgacaaggatcgagaatggggttggagcattcagtact
eaac585f172a Imported from capsule None
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diff changeset
102 gggtgcaatcctagattcgttttcaaacattccatcgtagcatcgtcgag
eaac585f172a Imported from capsule None
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diff changeset
103 aagttcgaaggaggaaaggatttcagtgaggctggattttgcaagcttca
eaac585f172a Imported from capsule None
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diff changeset
104 gtacttcgcagcattttttgaaggattcgatgcctgaaaaaaattagaaa
eaac585f172a Imported from capsule None
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parents:
diff changeset
105 ttgaaaaatttgaacccattatataaatattcaacctaccaagcatcgca
eaac585f172a Imported from capsule None
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parents:
diff changeset
106 ctttgtacacttttcggtttaggaaccgcagtcattgtgacgcttgtgat
eaac585f172a Imported from capsule None
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diff changeset
107 aacacccaactgcccttcacttcccaagaataggtgtggagtgtgcaaag
eaac585f172a Imported from capsule None
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parents:
diff changeset
108 ttgtgttgtccttccgaatgcttgatcccaaatgtagaacagttccatgt
eaac585f172a Imported from capsule None
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diff changeset
109 tcatcgggaagaaccaccgtgagcccgagaagatgtgcgtgaagacttcc
eaac585f172a Imported from capsule None
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parents:
diff changeset
110 gtatcgaatcaaccgaatccctcctgcacacgtggcaatatttcctccaa
eaac585f172a Imported from capsule None
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parents:
diff changeset
111 tctgacaggatcctttggctccgagatcaaaaggcatcatatatccgagt
eaac585f172a Imported from capsule None
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parents:
diff changeset
112 tttgcaagtttgttgtccaagtcttccagaataaaaccagaatcacactt
eaac585f172a Imported from capsule None
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parents:
diff changeset
113 gagaattcccattgtgtcgtcgaaagagaattgcttgttgattttattca
eaac585f172a Imported from capsule None
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parents:
diff changeset
114 ttgatataacaacttcatcatgtactggaattgatccaccaacgagtcct
eaac585f172a Imported from capsule None
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parents:
diff changeset
115 gtattccctccttgtgggactactgccaatttgttcttggagcaatacgc
eaac585f172a Imported from capsule None
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parents:
diff changeset
116 caatattgcagaaacctcttcggtgctcttcgggtagaggacgacactgc
eaac585f172a Imported from capsule None
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parents:
diff changeset
117 caggacctggaaattaaaacatttaatatttaaagtacctatttaatatt
eaac585f172a Imported from capsule None
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parents:
diff changeset
118 aaataaacctaatcttaaaatacaaatacctttaaattggcctgtccaat
eaac585f172a Imported from capsule None
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parents:
diff changeset
119 ctgtagtatgatttgtaatatcgtccttcttcactgcatcttgcccgaga
eaac585f172a Imported from capsule None
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parents:
diff changeset
120 aaattctcaaatgccattaaatccgactgcatcacttttgcaaatccttc
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
121 atgtctggcggcaagaactgctgcgtagcttctagttggtcttctgattc
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
122 gtggcaagattttcagaaacatctgaattcagaaacttttcaaaaaataa
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
123 cttgaaacttcaaaagaaatagtaggagacaaagctcggctaggtgaccg
eaac585f172a Imported from capsule None
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parents:
diff changeset
124
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
125 >chrIII:2172325-2172669
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
126 CAGGCAGTCAGTCAGTCTCTCTCCACTCACATTCAGTCAGTCAGTGACCA
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
127 TCACCAGGTTGTGTGTGAGCCCCTTCCATTATTCTTCTGAACCCCCCTCC
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
128 CAACGCGGGAAGACTCGCCGGCAATGACACTGGTTATCTTTTCCATCGTG
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
129 GAATGCCCCCCATTGATTTTTTCCCCTTTTCGGGGGGAAAAAATTGGAAA
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
130 CGAGAAAGGTATCGGGTGTCATAGCCGGCGTGATCATCTTCCTCAAGTAT
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
131 TCCTCTGCTGATTTCGATATTCGGAGGAGCTCGGAGGCTGTTCAGCTGTA
eaac585f172a Imported from capsule None
rnateam
parents:
diff changeset
132 AAATTGGTTGATTAAGCTCAAAAATCGGCGTTAACGCGGCTTTCC