>chrII:11534525-11540624_7
score total		      102170.8
score for star read(s)	           3.9
score for read counts	      102159.9
score for mfe		           2.4
score for randfold	           1.6
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	        200394
mature read count	        200381
loop read count		             0
star read count		            13
exp             fffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMffffffffffffffffff
obs             fffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMffffffffffffffffff
pri_seq         caacuauuauucucggaucagaucgagccauugcugguuucuuccacagugguacuuuccauuagaacuaucaccggguggaaacuagcaguggcucgaucuuuuccacu
pri_struct      ..............(((..(((((((((((((((((((((((.((.(.((((((.(((......))).)))))).))).)))))))))))))))))))))))..)))...	#MM
seq_377956_x1   ...............................ugcugguuucuuccacagugg..........................................................	0
seq_377882_x1   ...............................ugAugguuucuuccacaguggu.........................................................	1
seq_375231_x11  ...............................ugcugguuucuuccacaguggua........................................................	0
seq_377915_x1   ................................................................gaacuaucaccggguggaaacuagcag...................	0
seq_378313_x1   ....................................................................Aaucaccggguggaaacuag......................	1
seq_378070_x1   ....................................................................Aaucaccggguggaaacuagc.....................	1
seq_374207_x17  ....................................................................Aaucaccggguggaaacuagcag...................	1
seq_365952_x99  ....................................................................Aaucaccggguggaaacuagcagu..................	1
seq_377777_x1   ....................................................................uCucaccggguggaaacuagcagu..................	1
seq_377818_x1   .....................................................................Cucaccggguggaaacuagca....................	1
seq_378115_x1   .....................................................................aucaccggguggaaacuagca....................	0
seq_377479_x2   .....................................................................aucaccggguggaaacuagcag...................	0
seq_377175_x3   .....................................................................Cucaccggguggaaacuagcag...................	1
seq_377327_x2   .....................................................................Uucaccggguggaaacuagcag...................	1
seq_369310_x61  .....................................................................Cucaccggguggaaacuagcagu..................	1
seq_377793_x1   .....................................................................aucaccgggGggaaacuagcagu..................	1
seq_377962_x1   .....................................................................aucaAcggguggaaacuagcagu..................	1
seq_378051_x1   .....................................................................aucaccggguggaaaAuagcagu..................	1
seq_378323_x1   .....................................................................aucaccggguggaaacuagAagu..................	1
seq_371516_x35  .....................................................................aucaccggguggaaacuagcagu..................	0
seq_377055_x3   .....................................................................aucaccggguggaaacuagcagC..................	1
seq_377970_x1   .....................................................................aucaccggguggaaacuagcagG..................	1
seq_377511_x2   .....................................................................Uucaccggguggaaacuagcagu..................	1
seq_378079_x1   .....................................................................aucaccggguggaaacuagcaguA.................	1
seq_377431_x2   .....................................................................aucaccggguggaaacuagcaguU.................	1
seq_377752_x1   ......................................................................ucaccggguggaaaAuag......................	1
seq_377443_x2   ......................................................................ucaccgggCggaaacuag......................	1
seq_378226_x1   ......................................................................ucaccCgguggaaacuag......................	1
seq_377974_x1   ......................................................................ucaccgggGggaaacuag......................	1
seq_378168_x1   ......................................................................ucaUcggguggaaacuag......................	1
seq_377959_x1   ......................................................................ucaAcggguggaaacuag......................	1
seq_377875_x1   ......................................................................ucaccggguggaaaUuag......................	1
seq_377878_x1   ......................................................................ucaccggguCgaaacuag......................	1
seq_378112_x1   ......................................................................ucaccggguggaNacuag......................	1
seq_378013_x1   ......................................................................ucaccggguggaaacuaC......................	1
seq_366886_x88  ......................................................................ucaccggguggaaacuag......................	0
seq_377813_x1   ......................................................................ucaccgggCggaaacuagc.....................	1
seq_377341_x2   ......................................................................ucaccggguggaaacuaCc.....................	1
seq_378124_x1   ......................................................................Ccaccggguggaaacuagc.....................	1
seq_378326_x1   ......................................................................ucaccgggugAaaacuagc.....................	1
seq_377088_x3   ......................................................................ucaccgggGggaaacuagc.....................	1
seq_378155_x1   ......................................................................ucaccgggugCaaacuagc.....................	1
seq_377717_x2   ......................................................................ucaccggguggaaacuCgc.....................	1
seq_377885_x1   ......................................................................ucaccggguggaCacuagc.....................	1
seq_377957_x1   ......................................................................ucaccggguggGaacuagc.....................	1
seq_376727_x4   ......................................................................ucaccggguggaNacuagc.....................	1
seq_363229_x131 ......................................................................ucaccggguggaaacuagc.....................	0
seq_377513_x2   ......................................................................ucacAggguggaaacuagc.....................	1
seq_378006_x1   ......................................................................ucaAcggguggaaacuagc.....................	1
seq_377383_x2   ......................................................................ucaccggguggaaaGuagc.....................	1
seq_377539_x2   ......................................................................ucaccggguggaaacuagU.....................	1
seq_377451_x2   ......................................................................ucaccggguggaaacuagA.....................	1
seq_372840_x25  ......................................................................ucaccgggCggaaacuagca....................	1
seq_377947_x1   ......................................................................ucGccggguggaaacuagca....................	1
seq_376538_x5   ......................................................................uAaccggguggaaacuagca....................	1
seq_377946_x1   ......................................................................ucaccggguggaaacGagca....................	1
seq_375901_x9   ......................................................................ucaccggguggaaacuaUca....................	1
seq_377531_x2   ......................................................................ucaccgggugCaaacuagca....................	1
seq_378056_x1   ......................................................................ucaccggguggGaacuagca....................	1
seq_376791_x4   ......................................................................ucaccggguggaGacuagca....................	1
seq_373200_x23  ......................................................................ucaccggguggaNacuagca....................	1
seq_377848_x1   ......................................................................ucaccggguggaaacuNgca....................	1
seq_377417_x2   ......................................................................ucaccggguggaaCcuagca....................	1
seq_377003_x4   ......................................................................ucaccgAguggaaacuagca....................	1
seq_376401_x6   ......................................................................ucaccggCuggaaacuagca....................	1
seq_377127_x3   ......................................................................ucaccggAuggaaacuagca....................	1
seq_378107_x1   ......................................................................uUaccggguggaaacuagca....................	1
seq_376935_x4   ......................................................................Gcaccggguggaaacuagca....................	1
seq_375025_x13  ......................................................................ucaccggguggaaacuagcU....................	1
seq_377653_x2   ......................................................................ucaccggguggaaacCagca....................	1
seq_313497_x2021......................................................................ucaccggguggaaacuagca....................	0
seq_374657_x15  ......................................................................ucaccggguggaaaAuagca....................	1
seq_377613_x2   ......................................................................ucaccggguUgaaacuagca....................	1
seq_375675_x10  ......................................................................ucaccggguggaaacuagcG....................	1
seq_371371_x37  ......................................................................ucaccgggGggaaacuagca....................	1
seq_376763_x4   ......................................................................ucacUggguggaaacuagca....................	1
seq_375934_x8   ......................................................................ucaccggguggaaacuCgca....................	1
seq_377599_x2   ......................................................................ucaccggguggaaacuagUa....................	1
seq_377839_x1   ......................................................................Ncaccggguggaaacuagca....................	1
seq_378050_x1   ......................................................................uNaccggguggaaacuagca....................	1
seq_376799_x4   ......................................................................ucaccggguggaaacuaAca....................	1
seq_376638_x5   ......................................................................ucaccggguggaCacuagca....................	1
seq_373823_x19  ......................................................................ucaccgggAggaaacuagca....................	1
seq_376803_x4   ......................................................................ucaccggguggaaacuagcC....................	1
seq_377683_x2   ......................................................................ucaccggguggaaacuagAa....................	1
seq_377112_x3   ......................................................................ucaccggguggCaacuagca....................	1
seq_376658_x5   ......................................................................ucaccggguggaaaUuagca....................	1
seq_376485_x6   ......................................................................ucaccggguggUaacuagca....................	1
seq_376169_x7   ......................................................................ucaccggguggaaacuagNa....................	1
seq_370746_x41  ......................................................................ucacAggguggaaacuagca....................	1
seq_375910_x8   ......................................................................ucaAcggguggaaacuagca....................	1
seq_378190_x1   ......................................................................ucaccggguCgaaacuagca....................	1
seq_377193_x3   ......................................................................ucaccgggugUaaacuagca....................	1
seq_376407_x6   ......................................................................Acaccggguggaaacuagca....................	1
seq_377283_x3   ......................................................................ucaUcggguggaaacuagca....................	1
seq_377643_x2   ......................................................................uGaccggguggaaacuagca....................	1
seq_378128_x1   ......................................................................ucaccggguggaaUcuagca....................	1
seq_377561_x2   ......................................................................ucaccggguggaaacuaCca....................	1
seq_375405_x10  ......................................................................ucaccgCguggaaacuagca....................	1
seq_377419_x2   ......................................................................ucaccggguAgaaacuagca....................	1
seq_377377_x2   ......................................................................ucaccAgguggaaacuagca....................	1
seq_376497_x6   ......................................................................ucaccUgguggaaacuagca....................	1
seq_377292_x3   ......................................................................Ccaccggguggaaacuagca....................	1
seq_377034_x3   ......................................................................ucaccgggugAaaacuagca....................	1
seq_378087_x1   ......................................................................ucaccgggNggaaacuagca....................	1
seq_377235_x3   ......................................................................ucaccggguggaaacAagcag...................	1
seq_373154_x23  ......................................................................ucaccUgguggaaacuagcag...................	1
seq_361443_x144 ......................................................................ucaccgggGggaaacuagcag...................	1
seq_375100_x12  ......................................................................uNaccggguggaaacuagcag...................	1
seq_376046_x8   ......................................................................ucaccggguggaaacCagcag...................	1
seq_373568_x20  ......................................................................ucaccggguggaaaUuagcag...................	1
seq_375012_x13  ......................................................................ucaccggguUgaaacuagcag...................	1
seq_377076_x3   ......................................................................ucaccggguggaaacuagcGg...................	1
seq_374715_x14  ......................................................................ucaccggguggGaacuagcag...................	1
seq_370705_x41  ......................................................................ucaccggguggaaacuaUcag...................	1
seq_377563_x2   ......................................................................Acaccggguggaaacuagcag...................	1
seq_362702_x132 ......................................................................ucaccggguggaaacuagcaU...................	1
seq_373084_x24  ......................................................................ucaccggguggaaacuCgcag...................	1
seq_277590_x9943......................................................................ucaccggguggaaacuagcag...................	0
seq_371687_x34  ......................................................................ucaccggguggaaacuagcaA...................	1
seq_376246_x7   ......................................................................ucaccggUuggaaacuagcag...................	1
seq_373356_x22  ......................................................................ucaccgggugCaaacuagcag...................	1
seq_374455_x16  ......................................................................ucaccggguggaaacuaCcag...................	1
seq_377037_x3   ......................................................................ucUccggguggaaacuagcag...................	1
seq_376413_x6   ......................................................................ucaccggguggaaUcuagcag...................	1
seq_377325_x2   ......................................................................ucGccggguggaaacuagcag...................	1
seq_376383_x6   ......................................................................ucCccggguggaaacuagcag...................	1
seq_375242_x11  ......................................................................ucaccgUguggaaacuagcag...................	1
seq_374471_x16  ......................................................................uGaccggguggaaacuagcag...................	1
seq_374882_x13  ......................................................................ucaUcggguggaaacuagcag...................	1
seq_378207_x1   ......................................................................ucaccggguggaaaNuagcag...................	1
seq_373918_x19  ......................................................................ucaccggCuggaaacuagcag...................	1
seq_373993_x18  ......................................................................ucaccggguggaaacuNgcag...................	1
seq_373464_x21  ......................................................................ucaccggAuggaaacuagcag...................	1
seq_376305_x6   ......................................................................ucaccgAguggaaacuagcag...................	1
seq_375892_x9   ......................................................................ucaccggguggaaCcuagcag...................	1
seq_374047_x18  ......................................................................ucaccggguggaaacuagAag...................	1
seq_374813_x14  ......................................................................ucaccggguggaaacuagcaC...................	1
seq_374986_x13  ......................................................................ucaccggguggaaaGuagcag...................	1
seq_374827_x14  ......................................................................ucacUggguggaaacuagcag...................	1
seq_374503_x16  ......................................................................uAaccggguggaaacuagcag...................	1
seq_372763_x26  ......................................................................ucaccggguggaCacuagcag...................	1
seq_375465_x10  ......................................................................ucaccggguggaaacuGgcag...................	1
seq_375264_x11  ......................................................................ucaccgggugAaaacuagcag...................	1
seq_375575_x10  ......................................................................ucaccggguggaaacuUgcag...................	1
seq_378072_x1   ......................................................................ucaNcggguggaaacuagcag...................	1
seq_375856_x9   ......................................................................Gcaccggguggaaacuagcag...................	1
seq_364582_x111 ......................................................................ucaccgggCggaaacuagcag...................	1
seq_372940_x24  ......................................................................ucaccggguggUaacuagcag...................	1
seq_372523_x27  ......................................................................ucaccggguggaGacuagcag...................	1
seq_375172_x12  ......................................................................ucaccggguggaaacuagcCg...................	1
seq_375341_x11  ......................................................................ucaccggguAgaaacuagcag...................	1
seq_378331_x1   ......................................................................Ncaccggguggaaacuagcag...................	1
seq_375820_x9   ......................................................................ucaccgggugUaaacuagcag...................	1
seq_377543_x2   ......................................................................ucaccggNuggaaacuagcag...................	1
seq_375784_x9   ......................................................................ucaccggguggaUacuagcag...................	1
seq_374275_x17  ......................................................................ucaGcggguggaaacuagcag...................	1
seq_374582_x15  ......................................................................ucaccggguggaaacuagNag...................	1
seq_377647_x2   ......................................................................ucaccggguCgaaacuagcag...................	1
seq_371106_x39  ......................................................................ucaAcggguggaaacuagcag...................	1
seq_357095_x189 ......................................................................ucacAggguggaaacuagcag...................	1
seq_376225_x7   ......................................................................uUaccggguggaaacuagcag...................	1
seq_374224_x17  ......................................................................ucaccggguggaaacuagcUg...................	1
seq_377577_x2   ......................................................................ucaccggguggaaGcuagcag...................	1
seq_364121_x117 ......................................................................ucaccgggAggaaacuagcag...................	1
seq_374743_x14  ......................................................................ucaccggguggCaacuagcag...................	1
seq_377298_x3   ......................................................................ucaccggguggaaacGagcag...................	1
seq_370537_x43  ......................................................................ucaccgCguggaaacuagcag...................	1
seq_376827_x4   ......................................................................ucacGggguggaaacuagcag...................	1
seq_377575_x2   ......................................................................ucaccggguggaaacuagGag...................	1
seq_366243_x94  ......................................................................ucaccggguggaaaAuagcag...................	1
seq_376267_x7   ......................................................................ucaccCgguggaaacuagcag...................	1
seq_374173_x17  ......................................................................ucaccggguggaaacuaAcag...................	1
seq_376491_x6   ......................................................................ucaccAgguggaaacuagcag...................	1
seq_366616_x91  ......................................................................ucaccggguggaNacuagcag...................	1
seq_374921_x13  ......................................................................Ccaccggguggaaacuagcag...................	1
seq_372294_x30  ......................................................................ucaccggguggaaacuagUag...................	1
seq_353824_x217 ......................................................................ucaccggguggaaacuagcaUu..................	1
seq_350246_x264 ......................................................................ucaccggguggCaacuagcagu..................	1
seq_315518_x1866......................................................................ucaccgggCggaaacuagcagu..................	1
seq_359581_x164 ......................................................................ucaccggguggaaUcuagcagu..................	1
seq_362834_x132 ......................................................................ucaccggguggaaacuagcaAu..................	1
seq_343209_x360 ......................................................................ucaccgggugAaaacuagcagu..................	1
seq_370664_x41  ......................................................................ucaccggguggaaacAagcagu..................	1
seq_358905_x171 ......................................................................ucaccggguggaUacuagcagu..................	1
seq_365851_x101 ......................................................................ucaccggguAgaaacuagcagu..................	1
seq_337854_x604 ......................................................................ucaAcggguggaaacuagcagu..................	1
seq_356125_x198 ......................................................................ucaccggguggGaacuagcagu..................	1
seq_356519_x194 ......................................................................ucaccAgguggaaacuagcagu..................	1
seq_360382_x156 ......................................................................ucaccggguggaaacuaAcagu..................	1
seq_346877_x304 ......................................................................ucaccggguggaaacuagcUgu..................	1
seq_350773_x263 ......................................................................ucaccggguggaaacuagAagu..................	1
seq_334503_x690 ......................................................................ucaccggguggaaacuagcagC..................	1
seq_303609_x2808......................................................................ucaccgggGggaaacuagcagu..................	1
seq_338458_x598 ......................................................................ucaccggguggaaacuaUcagu..................	1
seq_378211_x1   ......................................................................ucaccggguggNaacuagcagu..................	1
seq_364693_x111 ......................................................................ucaccggguggaaacGagcagu..................	1
seq_371067_x39  ......................................................................ucaccggNuggaaacuagcagu..................	1
seq_358554_x177 ......................................................................ucaccgAguggaaacuagcagu..................	1
seq_324605_x1295......................................................................ucaccggguggaNacuagcagu..................	1
seq_363360_x131 ......................................................................ucaccggguggaaaGuagcagu..................	1
seq_350510_x263 ......................................................................ucaccggguggaaacuaCcagu..................	1
seq_353161_x223 ......................................................................ucaccggguggaaacuNgcagu..................	1
seq_369000_x64  ......................................................................ucaccggguggaaacuagcGgu..................	1
seq_376811_x4   ......................................................................ucaccNgguggaaacuagcagu..................	1
seq_354681_x211 ......................................................................ucaGcggguggaaacuagcagu..................	1
seq_345626_x322 ......................................................................ucaccggguggaaaUuagcagu..................	1
seq_371184_x38  ......................................................................ucacGggguggaaacuagcagu..................	1
seq_348338_x283 ......................................................................ucaccggguggaaacuagUagu..................	1
seq_346264_x309 ......................................................................ucaccggguggaaacuagcCgu..................	1
seq_343924_x352 ......................................................................ucaccgggugCaaacuagcagu..................	1
seq_306417_x2793......................................................................ucacAggguggaaacuagcagu..................	1
seq_346573_x304 ......................................................................ucaccggguggUaacuagcagu..................	1
seq_339056_x557 ......................................................................ucaccggguggaaacuagcagG..................	1
seq_374612_x15  ......................................................................ucaccgggNggaaacuagcagu..................	1
seq_367235_x86  ......................................................................ucaccCgguggaaacuagcagu..................	1
seq_333000_x757 ......................................................................ucaccgCguggaaacuagcagu..................	1
seq_377559_x2   ......................................................................ucNccggguggaaacuagcagu..................	1
seq_340662_x508 ......................................................................ucaccggguggaCacuagcagu..................	1
seq_317384_x1629......................................................................ucaccgggAggaaacuagcagu..................	1
seq_370493_x44  ......................................................................ucGccggguggaaacuagcagu..................	1
seq_357654_x183 ......................................................................uGaccggguggaaacuagcagu..................	1
seq_336553_x669 ......................................................................ucaccggguggaaacuagcagA..................	1
seq_362966_x132 ......................................................................ucaccgggugUaaacuagcagu..................	1
seq_0_x149538   ......................................................................ucaccggguggaaacuagcagu..................	0
seq_355722_x204 ......................................................................uUaccggguggaaacuagcagu..................	1
seq_374567_x15  ......................................................................ucaNcggguggaaacuagcagu..................	1
seq_367321_x85  ......................................................................ucaccggguggaaCcuagcagu..................	1
seq_359246_x169 ......................................................................ucacUggguggaaacuagcagu..................	1
seq_321959_x1326......................................................................ucaccggguggaaaAuagcagu..................	1
seq_373688_x20  ......................................................................Ncaccggguggaaacuagcagu..................	1
seq_352016_x236 ......................................................................ucaccggguggaaacuagNagu..................	1
seq_349981_x265 ......................................................................ucaccggguUgaaacuagcagu..................	1
seq_377079_x3   ......................................................................ucaccggguggaaaNuagcagu..................	1
seq_355102_x209 ......................................................................ucaccggCuggaaacuagcagu..................	1
seq_363620_x129 ......................................................................ucaccgUguggaaacuagcagu..................	1
seq_348621_x282 ......................................................................ucaccggguggaaacuCgcagu..................	1
seq_364914_x108 ......................................................................ucaccggUuggaaacuagcagu..................	1
seq_356713_x192 ......................................................................Gcaccggguggaaacuagcagu..................	1
seq_362015_x141 ......................................................................uNaccggguggaaacuagcagu..................	1
seq_377049_x3   ......................................................................ucaccggguggaaacuagcagN..................	1
seq_370988_x40  ......................................................................ucaccggguggaaacuagGagu..................	1
seq_365750_x101 ......................................................................Acaccggguggaaacuagcagu..................	1
seq_360538_x155 ......................................................................ucaccggguCgaaacuagcagu..................	1
seq_358198_x178 ......................................................................ucaccggguggaaacuagcaCu..................	1
seq_347766_x287 ......................................................................uAaccggguggaaacuagcagu..................	1
seq_367734_x78  ......................................................................ucCccggguggaaacuagcagu..................	1
seq_359907_x159 ......................................................................ucaccggguggaaacuGgcagu..................	1
seq_349444_x269 ......................................................................ucaccUgguggaaacuagcagu..................	1
seq_361151_x146 ......................................................................Ccaccggguggaaacuagcagu..................	1
seq_344276_x345 ......................................................................ucaccggguggaGacuagcagu..................	1
seq_376183_x7   ......................................................................ucaccggguggaaacuaNcagu..................	1
seq_353605_x219 ......................................................................ucaccggAuggaaacuagcagu..................	1
seq_359415_x166 ......................................................................ucaccggguggaaacCagcagu..................	1
seq_371755_x33  ......................................................................ucUccggguggaaacuagcagu..................	1
seq_355518_x204 ......................................................................ucaUcggguggaaacuagcagu..................	1
seq_375811_x9   ......................................................................ucacNggguggaaacuagcagu..................	1
seq_342436_x389 ......................................................................ucaccggguggaaacuUgcagu..................	1
seq_370948_x40  ......................................................................ucaccggguggaaGcuagcagu..................	1
seq_369608_x57  ......................................................................ucaccggguggaaacuagcagug.................	0
seq_309210_x2159......................................................................ucaccggguggaaacuagcaguA.................	1
seq_378140_x1   ......................................................................ucaccggguCgaaacuagcagug.................	1
seq_378025_x1   ......................................................................ucaccggguUgaaacuagcagug.................	1
seq_287533_x5429......................................................................ucaccggguggaaacuagcaguU.................	1
seq_377923_x1   ......................................................................ucaccggguggaaaAuagcagug.................	1
seq_377507_x2   ......................................................................ucaccggguggaUacuagcagug.................	1
seq_369929_x51  ......................................................................ucaccggguggaaacuagcaguC.................	1
seq_377181_x3   ......................................................................ucaccgggGggaaacuagcagug.................	1
seq_378212_x1   ......................................................................ucaccggguggaaacuagcaAug.................	1
seq_378218_x1   ......................................................................ucaccggguggaaacuagcagCg.................	1
seq_378222_x1   ......................................................................ucaccgggCggaaacuagcagug.................	1
seq_377304_x3   ......................................................................ucacAggguggaaacuagcagug.................	1
seq_378319_x1   ......................................................................ucaccggguggaaacuagNagug.................	1
seq_378109_x1   ......................................................................Gcaccggguggaaacuagcagug.................	1
seq_377806_x1   ......................................................................ucaccggguggaCacuagcagug.................	1
seq_378252_x1   ......................................................................ucaccgggugCaaacuagcagug.................	1
seq_378135_x1   ......................................................................ucaccggguggaaacuagcagAgg................	1
seq_377427_x2   ......................................................................ucaccggguggaaacuagcagugU................	1
seq_376723_x4   ......................................................................ucaccggguggaaacuagcaguAg................	1
seq_378093_x1   ......................................................................ucaccggguggaaacuagcagugg................	0
seq_378199_x1   ......................................................................Ccaccggguggaaacuagcagugg................	1
seq_377019_x3   ......................................................................ucaccggguggaaacuagcaguUg................	1
seq_376939_x4   ......................................................................ucaccggguggaaacuagcagugC................	1
seq_377675_x2   ......................................................................ucaccggguggaaacuagcagugCc...............	1
seq_378133_x1   ......................................................................ucaccggguggaaacuagcaguCgc...............	1
seq_377421_x2   ......................................................................ucaccggguggaaacuagcagugAc...............	1
seq_377913_x1   ......................................................................ucaccggguggaaacuagcaguggA...............	1
seq_378078_x1   ......................................................................ucaccggguggaaacuagcaguggU...............	1
seq_377619_x2   ......................................................................ucaccggguggaaacuagcaguAgc...............	1
seq_377807_x1   ......................................................................ucaccggguggaaacuagcagAggc...............	1
seq_377898_x1   ......................................................................ucaccggguggaaacuagcagugAcu..............	1
seq_378113_x1   ......................................................................ucaccggguggaaacuagcaguggAu..............	1
seq_377401_x2   ......................................................................ucaccggguggaaacuagcaguggcG..............	1
seq_378194_x1   ......................................................................ucaccggguggaaacuagcaguggcu..............	0
seq_378167_x1   ......................................................................ucaccggguggaaacuagcaguCgcuc.............	1
seq_378175_x1   ......................................................................ucaccggguggaaacuagcaguggUuc.............	1
seq_377994_x1   .......................................................................caccggguggaaacuagca....................	0
seq_378189_x1   .......................................................................caccggguggGaacuagcag...................	1
seq_374960_x13  .......................................................................caccggguggaaacuagcag...................	0
seq_377130_x3   .......................................................................caccgggAggaaacuagcagu..................	1
seq_377925_x1   .......................................................................caccggguggaaacuagAagu..................	1
seq_378300_x1   .......................................................................cCccggguggaaacuagcagu..................	1
seq_377505_x2   .......................................................................Uaccggguggaaacuagcagu..................	1
seq_365546_x102 .......................................................................caccggguggaaacuagcagu..................	0
seq_377187_x3   .......................................................................caccggguggaaaAuagcagu..................	1
seq_374407_x16  .......................................................................caccgggGggaaacuagcagu..................	1
seq_377475_x2   .......................................................................caAcggguggaaacuagcagu..................	1
seq_377908_x1   .......................................................................caccggguggaaacuagcaUu..................	1
seq_378180_x1   .......................................................................caccggguggaaacuagcGgu..................	1
seq_377250_x3   .......................................................................caccgggCggaaacuagcagu..................	1
seq_375435_x10  .......................................................................caccggguggaaacuagcaguA.................	1
seq_371551_x34  .......................................................................caccggguggaaacuagcaguU.................	1
seq_378114_x1   ........................................................................accggguggaaGcuagca....................	1
seq_377537_x2   ........................................................................accCgguggaaacuagca....................	1
seq_375253_x11  ........................................................................accggguggaaacuagca....................	0
seq_378294_x1   ........................................................................accggguggGaacuagca....................	1
seq_377758_x1   ........................................................................accggguggaaacuagcCg...................	1
seq_377711_x2   ........................................................................accgggAggaaacuagcag...................	1
seq_368606_x67  ........................................................................accggguggaaacuagcag...................	0
seq_377491_x2   ........................................................................accgggCggaaacuagcag...................	1
seq_378325_x1   ........................................................................accggguggGaacuagcag...................	1
seq_377944_x1   ........................................................................aAcggguggaaacuagcag...................	1
seq_378146_x1   ........................................................................accggguggaGacuagcag...................	1
seq_378272_x1   ........................................................................accgAguggaaacuagcag...................	1
seq_378213_x1   ........................................................................accggguggaaacuaAcag...................	1
seq_376449_x6   ........................................................................accgggGggaaacuagcag...................	1
seq_377814_x1   ........................................................................accggguggaaacuaUcag...................	1
seq_377816_x1   ........................................................................accggguggaaacuagcaC...................	1
seq_377487_x2   ........................................................................accggguggaCacuagcagu..................	1
seq_377976_x1   ........................................................................accgggugCaaacuagcagu..................	1
seq_376895_x4   ........................................................................accggguggCaacuagcagu..................	1
seq_376608_x5   ........................................................................accggguggaaacuagAagu..................	1
seq_377589_x2   ........................................................................accggguggaaacCagcagu..................	1
seq_378160_x1   ........................................................................accggguggaaacuGgcagu..................	1
seq_376197_x7   ........................................................................accggguggaaaUuagcagu..................	1
seq_377007_x3   ........................................................................accgAguggaaacuagcagu..................	1
seq_378247_x1   ........................................................................accggguggaaacuagcaAu..................	1
seq_377343_x2   ........................................................................accggguAgaaacuagcagu..................	1
seq_369980_x50  ........................................................................accCgguggaaacuagcagu..................	1
seq_377859_x1   ........................................................................accAgguggaaacuagcagu..................	1
seq_377999_x1   ........................................................................accggguggaaGcuagcagu..................	1
seq_377373_x2   ........................................................................accgggugAaaacuagcagu..................	1
seq_377142_x3   ........................................................................acUggguggaaacuagcagu..................	1
seq_377064_x3   ........................................................................accggguggaaacuagNagu..................	1
seq_368470_x69  ........................................................................accgggGggaaacuagcagu..................	1
seq_378073_x1   ........................................................................accggguggaaacuUgcagu..................	1
seq_376623_x5   ........................................................................accggguggaaaNuagcagu..................	1
seq_374672_x15  ........................................................................accgggAggaaacuagcagu..................	1
seq_377457_x2   ........................................................................accgggugUaaacuagcagu..................	1
seq_378191_x1   ........................................................................aGcggguggaaacuagcagu..................	1
seq_329405_x990 ........................................................................accggguggaaacuagcagu..................	0
seq_375926_x8   ........................................................................accggguggGaacuagcagu..................	1
seq_374908_x13  ........................................................................accggguggaaacuagcagC..................	1
seq_377307_x3   ........................................................................accggguggaaaGuagcagu..................	1
seq_376987_x4   ........................................................................acAggguggaaacuagcagu..................	1
seq_377767_x1   ........................................................................accggguggaUacuagcagu..................	1
seq_378314_x1   ........................................................................accggguggaaacAagcagu..................	1
seq_377983_x1   ........................................................................accggNuggaaacuagcagu..................	1
seq_376871_x4   ........................................................................accggguggaaacuagcUgu..................	1
seq_377583_x2   ........................................................................aUcggguggaaacuagcagu..................	1
seq_376867_x4   ........................................................................accggguCgaaacuagcagu..................	1
seq_376479_x6   ........................................................................aAcggguggaaacuagcagu..................	1
seq_378163_x1   ........................................................................accUgguggaaacuagcagu..................	1
seq_377010_x3   ........................................................................accggguggaaacuaCcagu..................	1
seq_377268_x3   ........................................................................accgCguggaaacuagcagu..................	1
seq_375730_x9   ........................................................................accggguggaaacuagcagA..................	1
seq_375802_x9   ........................................................................accggguggaaacuaAcagu..................	1
seq_377988_x1   ........................................................................accggguggaaacuagcaNu..................	1
seq_376787_x4   ........................................................................accggguggUaacuagcagu..................	1
seq_377415_x2   ........................................................................accggguggaaacuCgcagu..................	1
seq_370268_x46  ........................................................................accgggCggaaacuagcagu..................	1
seq_377889_x1   ........................................................................acGggguggaaacuagcagu..................	1
seq_374934_x13  ........................................................................accggguggaaaAuagcagu..................	1
seq_377519_x2   ........................................................................aNcggguggaaacuagcagu..................	1
seq_377881_x1   ........................................................................accggguggaaacGagcagu..................	1
seq_377381_x2   ........................................................................accggguggaaacuagcaUu..................	1
seq_377097_x3   ........................................................................Uccggguggaaacuagcagu..................	1
seq_377797_x1   ........................................................................accggguggaaacuagGagu..................	1
seq_376887_x4   ........................................................................accggUuggaaacuagcagu..................	1
seq_378150_x1   ........................................................................accggguggaaCcuagcagu..................	1
seq_378251_x1   ........................................................................accggguggaaacuagUagu..................	1
seq_376708_x5   ........................................................................accggguggaaacuagcaCu..................	1
seq_377811_x1   ........................................................................Cccggguggaaacuagcagu..................	1
seq_376731_x4   ........................................................................accggguggaaacuaUcagu..................	1
seq_375829_x9   ........................................................................accggguggaaacuagcagG..................	1
seq_374535_x16  ........................................................................accggguggaaacuagcCgu..................	1
seq_377685_x2   ........................................................................accggguggaGacuagcagu..................	1
seq_372017_x32  ........................................................................accggguggaaacuagcaguU.................	1
seq_377768_x1   ........................................................................accggguggaaacuagcagug.................	0
seq_373036_x24  ........................................................................accggguggaaacuagcaguA.................	1
seq_376927_x4   .........................................................................Ucggguggaaacuagcagu..................	1
seq_376014_x8   .........................................................................ccggguggaaacuagcagu..................	0
seq_378116_x1   .........................................................................Acggguggaaacuagcagu..................	1
seq_378329_x1   .........................................................................ccggguggaaacuagcaguggcu..............	0
seq_376903_x4   ..........................................................................cggguggaaacuagcagu..................	0
seq_378178_x1   ..........................................................................cggguggaaacuagAagu..................	1
seq_377996_x1   ............................................................................................ggcuAgaucuuuuccacu	1



>chrII:11534525-11540624_12
score total		          -0.2
score for star read(s)	          -1.3
score for read counts	             0
score for mfe		           0.2
score for randfold	          -2.2
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	        119546
mature read count	        119545
loop read count		             1
star read count		             0
exp             ffffffffffffffffffffMMMMMMMMMMMMMMMMMMMMMMlllllllllllllllllllllllllllllllSSSSSSSSSSSSSSSSSSSSSSSSSffffffffffff
pri_seq         gcuacauucucuaaucuguaucaccgggugaacacuugcagugguccucgugguuucucugugagccagguccuguuccgguuuuuuccguggugauaacgcauccaaaa
pri_struct      ..................((((((((((.((((....((((.(..(((((..(.....)..))))...)..)))))....))))...)).))))))))............	#MM
seq_378182_x1   ................Gguaucaccgggugaacacuugcagu....................................................................	1
seq_378210_x1   ..................uaucaccgggugaacacuugca......................................................................	0
seq_377082_x3   ..................Aaucaccgggugaacacuugcag.....................................................................	1
seq_376915_x4   ..................uaucaccgggugaacacuugcag.....................................................................	0
seq_378060_x1   ..................uaucaccgggugaacacuugcagu....................................................................	0
seq_367062_x87  ..................Aaucaccgggugaacacuugcagu....................................................................	1
seq_377289_x3   ...................aucaccgggugaacacuugca......................................................................	0
seq_377605_x2   ...................Cucaccgggugaacacuugca......................................................................	1
seq_378046_x1   ...................aucaccgggugaacacGugca......................................................................	1
seq_378288_x1   ...................aucaccgggGgaacacuugcag.....................................................................	1
seq_377997_x1   ...................aucaccgggugaaUacuugcag.....................................................................	1
seq_373177_x23  ...................Uucaccgggugaacacuugcag.....................................................................	1
seq_377844_x1   ...................aucaccgggugaacacuugcaU.....................................................................	1
seq_373668_x20  ...................aucaccgggugaacacuugcag.....................................................................	0
seq_377762_x1   ...................aucaAcgggugaacacuugcag.....................................................................	1
seq_377747_x1   ...................aucaccgggugaacaAuugcag.....................................................................	1
seq_376775_x4   ...................aucaccgggCgaacacuugcagu....................................................................	1
seq_377639_x2   ...................aucaccCggugaacacuugcagu....................................................................	1
seq_377521_x2   ...................aucaccgggugaacacuugAagu....................................................................	1
seq_377783_x1   ...................aucaccggCugaacacuugcagu....................................................................	1
seq_368805_x66  ...................Cucaccgggugaacacuugcagu....................................................................	1
seq_377353_x2   ...................aucaccgggugaacacuugcagC....................................................................	1
seq_378177_x1   ...................aucaccgggugaacacuGgcagu....................................................................	1
seq_378165_x1   ...................aucaccgggugaNcacuugcagu....................................................................	1
seq_377109_x3   ...................aucaccgggugaacacuugcaUu....................................................................	1
seq_377917_x1   ...................Uucaccgggugaacacuugcagu....................................................................	1
seq_376831_x4   ...................aucaccgggAgaacacuugcagu....................................................................	1
seq_377800_x1   ...................aucaccggUugaacacuugcagu....................................................................	1
seq_376839_x4   ...................aucaccgggGgaacacuugcagu....................................................................	1
seq_377963_x1   ...................auGaccgggugaacacuugcagu....................................................................	1
seq_378067_x1   ...................aucaccggAugaacacuugcagu....................................................................	1
seq_358376_x178 ...................aucaccgggugaacacuugcagu....................................................................	0
seq_377709_x2   ...................aucaccgggugaacacuugcCgu....................................................................	1
seq_377782_x1   ...................aucaccgggugaacacuugcUgu....................................................................	1
seq_377958_x1   ...................aucaccgCgugaacacuugcagu....................................................................	1
seq_378230_x1   ...................aucaccgggugaacacuugcGgu....................................................................	1
seq_377855_x1   ...................aucaccgggugaacacuugcagA....................................................................	1
seq_378037_x1   ...................aucaccgAgugaacacuugcagu....................................................................	1
seq_378265_x1   ...................aucaccgggugaacCcuugcagu....................................................................	1
seq_377954_x1   ...................aucaccgggugaacacuCgcagu....................................................................	1
seq_377772_x1   ...................aucaAcgggugaacacuugcagu....................................................................	1
seq_377527_x2   ...................aucaccgggugaacacuugcaguA...................................................................	1
seq_377133_x3   ...................aucaccgggugaacacuugcaguU...................................................................	1
seq_378317_x1   ....................uAaccgggugaacacuug........................................................................	1
seq_378095_x1   ....................Acaccgggugaacacuug........................................................................	1
seq_373608_x20  ....................ucaccgggugaacacuug........................................................................	0
seq_377971_x1   ....................ucaAcgggugaacacuug........................................................................	1
seq_378106_x1   ....................ucaccgggugaaAacuug........................................................................	1
seq_377951_x1   ....................ucaccgggGgaacacuug........................................................................	1
seq_378005_x1   ....................ucaccgggugaCcacuug........................................................................	1
seq_377918_x1   ....................ucaccgggugaacacuuU........................................................................	1
seq_378295_x1   ....................ucaccgUgugaacacuug........................................................................	1
seq_377445_x2   ....................ucaccgggugaaGacuug........................................................................	1
seq_377897_x1   ....................ucaccgggugaaGacuugc.......................................................................	1
seq_378284_x1   ....................ucaccgggugaacaGuugc.......................................................................	1
seq_373012_x24  ....................ucaccgggugaacacuugc.......................................................................	0
seq_377615_x2   ....................uAaccgggugaacacuugca......................................................................	1
seq_377553_x2   ....................uUaccgggugaacacuugca......................................................................	1
seq_378074_x1   ....................ucaccgggugaaNacuugca......................................................................	1
seq_376735_x4   ....................ucaccgggugaacacuuUca......................................................................	1
seq_375220_x11  ....................ucaccgggCgaacacuugca......................................................................	1
seq_378034_x1   ....................ucaccgggugCacacuugca......................................................................	1
seq_376568_x5   ....................ucaccggCugaacacuugca......................................................................	1
seq_376461_x6   ....................ucaccgAgugaacacuugca......................................................................	1
seq_377473_x2   ....................ucaccgggugaacacGugca......................................................................	1
seq_377757_x1   ....................ucaccggguCaacacuugca......................................................................	1
seq_372988_x24  ....................ucacAgggugaacacuugca......................................................................	1
seq_378205_x1   ....................ucaccgggugaacacuugUa......................................................................	1
seq_376943_x4   ....................ucaccgggugaacaAuugca......................................................................	1
seq_377253_x3   ....................ucaccgggugaacUcuugca......................................................................	1
seq_377555_x2   ....................ucaUcgggugaacacuugca......................................................................	1
seq_377891_x1   ....................ucaccAggugaacacuugca......................................................................	1
seq_378327_x1   ....................ucaccgggugaacacuugAa......................................................................	1
seq_327151_x1237....................ucaccgggugaacacuugca......................................................................	0
seq_378238_x1   ....................ucaccgggugaacacuCgca......................................................................	1
seq_377912_x1   ....................uNaccgggugaacacuugca......................................................................	1
seq_376443_x6   ....................ucaccgggugaaUacuugca......................................................................	1
seq_375385_x10  ....................ucaccgggugaacacuGgca......................................................................	1
seq_377802_x1   ....................ucaccgggugaacacCugca......................................................................	1
seq_376663_x5   ....................ucaccgggugaacacuugcU......................................................................	1
seq_376783_x4   ....................ucaccgggugaacacuuAca......................................................................	1
seq_376795_x4   ....................ucGccgggugaacacuugca......................................................................	1
seq_377190_x3   ....................ucaccgggugaacacuAgca......................................................................	1
seq_377335_x2   ....................ucaAcgggugaacacuugca......................................................................	1
seq_377541_x2   ....................ucaccggAugaacacuugca......................................................................	1
seq_377154_x3   ....................ucaccggguUaacacuugca......................................................................	1
seq_378270_x1   ....................Acaccgggugaacacuugca......................................................................	1
seq_376653_x5   ....................ucaccUggugaacacuugca......................................................................	1
seq_376543_x5   ....................uGaccgggugaacacuugca......................................................................	1
seq_376751_x4   ....................ucaccggUugaacacuugca......................................................................	1
seq_378299_x1   ....................ucaccgggugaacGcuugca......................................................................	1
seq_376078_x8   ....................ucaccgggGgaacacuugca......................................................................	1
seq_377830_x1   ....................ucaccgggugaCcacuugca......................................................................	1
seq_377397_x2   ....................ucaccgUgugaacacuugca......................................................................	1
seq_377557_x2   ....................ucacUgggugaacacuugca......................................................................	1
seq_377850_x1   ....................ucaccggNugaacacuugca......................................................................	1
seq_377405_x2   ....................ucaccgggugaaGacuugca......................................................................	1
seq_378080_x1   ....................ucaccgggugGacacuugca......................................................................	1
seq_375883_x9   ....................ucaccgCgugaacacuugca......................................................................	1
seq_377821_x1   ....................ucaccgggugaacCcuugca......................................................................	1
seq_374729_x14  ....................ucaccgggugaaAacuugca......................................................................	1
seq_377667_x2   ....................ucaGcgggugaacacuugca......................................................................	1
seq_377565_x2   ....................ucaccgggugaacacuugcG......................................................................	1
seq_377829_x1   ....................ucaccgggugaUcacuugca......................................................................	1
seq_373975_x18  ....................ucaccgggAgaacacuugca......................................................................	1
seq_377148_x3   ....................ucaccgggugaacacuuCca......................................................................	1
seq_378321_x1   ....................ucaccCggugaacacuugca......................................................................	1
seq_377824_x1   ....................Gcaccgggugaacacuugca......................................................................	1
seq_377046_x3   ....................ucaccgggugaacaGuugca......................................................................	1
seq_377838_x1   ....................ucaccgggugaacacuuNca......................................................................	1
seq_377355_x2   ....................ucaccgggugaacacuugGag.....................................................................	1
seq_376603_x5   ....................Acaccgggugaacacuugcag.....................................................................	1
seq_375415_x10  ....................ucaccgggugaacacuugAag.....................................................................	1
seq_376573_x5   ....................ucaccgggugaaGacuugcag.....................................................................	1
seq_376425_x6   ....................ucaccgggugaacacuAgcag.....................................................................	1
seq_376176_x7   ....................ucaccgggugaacacuugNag.....................................................................	1
seq_378132_x1   ....................ucacGgggugaacacuugcag.....................................................................	1
seq_376588_x5   ....................ucaUcgggugaacacuugcag.....................................................................	1
seq_376274_x7   ....................ucaccggguAaacacuugcag.....................................................................	1
seq_376070_x8   ....................ucaccgggugaacacuugcaC.....................................................................	1
seq_375308_x11  ....................ucaccgggugaacacCugcag.....................................................................	1
seq_376126_x8   ....................ucaccUggugaacacuugcag.....................................................................	1
seq_378103_x1   ....................ucNccgggugaacacuugcag.....................................................................	1
seq_376593_x5   ....................uGaccgggugaacacuugcag.....................................................................	1
seq_373937_x19  ....................ucaccgggugaacacuuUcag.....................................................................	1
seq_376204_x7   ....................ucaccgggugaacacuuCcag.....................................................................	1
seq_377435_x2   ....................ucaccggguCaacacuugcag.....................................................................	1
seq_377779_x1   ....................ucaccgggugaacaGuugcag.....................................................................	1
seq_377788_x1   ....................ucaccgggugaacacuNgcag.....................................................................	1
seq_377295_x3   ....................ucaccgggugaacacuCgcag.....................................................................	1
seq_376521_x6   ....................uAaccgggugaacacuugcag.....................................................................	1
seq_375766_x9   ....................ucaccgggugaaUacuugcag.....................................................................	1
seq_377265_x3   ....................uUaccgggugaacacuugcag.....................................................................	1
seq_376835_x4   ....................ucaccggAugaacacuugcag.....................................................................	1
seq_377729_x2   ....................ucaccgggugaUcacuugcag.....................................................................	1
seq_296962_x3796....................ucaccgggugaacacuugcag.....................................................................	0
seq_369371_x60  ....................ucaccgggGgaacacuugcag.....................................................................	1
seq_376643_x5   ....................ucaccgggugCacacuugcag.....................................................................	1
seq_376563_x5   ....................ucaccgUgugaacacuugcag.....................................................................	1
seq_377437_x2   ....................ucaGcgggugaacacuugcag.....................................................................	1
seq_376253_x7   ....................ucaccggguUaacacuugcag.....................................................................	1
seq_375793_x9   ....................ucaccgggugaacacuugcCg.....................................................................	1
seq_367812_x78  ....................ucacAgggugaacacuugcag.....................................................................	1
seq_376923_x4   ....................ucaccgggugaacacAugcag.....................................................................	1
seq_376347_x6   ....................ucaccgAgugaacacuugcag.....................................................................	1
seq_376190_x7   ....................ucacUgggugaacacuugcag.....................................................................	1
seq_370787_x41  ....................ucaccgggCgaacacuugcag.....................................................................	1
seq_377025_x3   ....................ucUccgggugaacacuugcag.....................................................................	1
seq_376983_x4   ....................ucCccgggugaacacuugcag.....................................................................	1
seq_378141_x1   ....................ucaccggNugaacacuugcag.....................................................................	1
seq_377067_x3   ....................ucaccgggugaCcacuugcag.....................................................................	1
seq_376155_x7   ....................Ccaccgggugaacacuugcag.....................................................................	1
seq_374771_x14  ....................ucaccgggugaacacuGgcag.....................................................................	1
seq_377786_x1   ....................ucaccgggugaacacuugcGg.....................................................................	1
seq_377515_x2   ....................ucaccgggugaacCcuugcag.....................................................................	1
seq_375184_x12  ....................ucaccgggugaacacuugcUg.....................................................................	1
seq_375958_x8   ....................ucaccgggugaacacuugUag.....................................................................	1
seq_372173_x31  ....................ucaccgggugaaNacuugcag.....................................................................	1
seq_372890_x25  ....................ucaccgggugaacaAuugcag.....................................................................	1
seq_372737_x26  ....................ucaccgCgugaacacuugcag.....................................................................	1
seq_371788_x33  ....................ucaccgggAgaacacuugcag.....................................................................	1
seq_376931_x4   ....................ucaccgggugGacacuugcag.....................................................................	1
seq_376389_x6   ....................ucaccAggugaacacuugcag.....................................................................	1
seq_374375_x16  ....................ucaccgggugaacacuugcaU.....................................................................	1
seq_377333_x2   ....................uNaccgggugaacacuugcag.....................................................................	1
seq_377723_x2   ....................ucGccgggugaacacuugcag.....................................................................	1
seq_376807_x4   ....................ucaccgggugUacacuugcag.....................................................................	1
seq_377547_x2   ....................ucaccgggugaacacuugcaA.....................................................................	1
seq_375535_x10  ....................ucaccgggugaacUcuugcag.....................................................................	1
seq_376911_x4   ....................ucaccggUugaacacuugcag.....................................................................	1
seq_373246_x22  ....................ucaccgggugaaAacuugcag.....................................................................	1
seq_376668_x5   ....................ucaccgggugaacaUuugcag.....................................................................	1
seq_378036_x1   ....................ucaccCggugaacacuugcag.....................................................................	1
seq_377651_x2   ....................ucaccgggugaGcacuugcag.....................................................................	1
seq_378309_x1   ....................ucaccgggugaacacuuAcag.....................................................................	1
seq_375990_x8   ....................ucaccggCugaacacuugcag.....................................................................	1
seq_375625_x10  ....................ucaAcgggugaacacuugcag.....................................................................	1
seq_376162_x7   ....................Gcaccgggugaacacuugcag.....................................................................	1
seq_376583_x5   ....................ucaccgggugaacacGugcag.....................................................................	1
seq_361001_x150 ....................ucaccgggugaacacuuCcagu....................................................................	1
seq_369064_x62  ....................ucaccgggugaacacuugcaAu....................................................................	1
seq_366051_x97  ....................ucaccgggugaacaUuugcagu....................................................................	1
seq_359745_x162 ....................ucaccgggugGacacuugcagu....................................................................	1
seq_335879_x674 ....................ucaccgCgugaacacuugcagu....................................................................	1
seq_352711_x226 ....................ucaccgggugaaGacuugcagu....................................................................	1
seq_344621_x340 ....................ucaAcgggugaacacuugcagu....................................................................	1
seq_332159_x841 ....................ucaccgggAgaacacuugcagu....................................................................	1
seq_351534_x242 ....................ucaccgggugaacacuugcagG....................................................................	1
seq_341618_x427 ....................ucaccgggugaacaAuugcagu....................................................................	1
seq_367149_x86  ....................ucaGcgggugaacacuugcagu....................................................................	1
seq_371222_x38  ....................ucaccggNugaacacuugcagu....................................................................	1
seq_335193_x686 ....................ucaccgggugaaAacuugcagu....................................................................	1
seq_363877_x122 ....................ucaccgggugaacacuNgcagu....................................................................	1
seq_149538_x90904....................ucaccgggugaacacuugcagu....................................................................	0
seq_360693_x155 ....................ucaccgggugaacacuugNagu....................................................................	1
seq_363491_x129 ....................ucaccgggugaacacuuAcagu....................................................................	1
seq_356323_x196 ....................ucaccgggugaaUacuugcagu....................................................................	1
seq_355311_x207 ....................ucaccggCugaacacuugcagu....................................................................	1
seq_365443_x103 ....................uGaccgggugaacacuugcagu....................................................................	1
seq_365022_x107 ....................uUaccgggugaacacuugcagu....................................................................	1
seq_375694_x9   ....................Ncaccgggugaacacuugcagu....................................................................	1
seq_356905_x190 ....................ucaccUggugaacacuugcagu....................................................................	1
seq_375974_x8   ....................ucUccgggugaacacuugcagu....................................................................	1
seq_363749_x128 ....................ucaUcgggugaacacuugcagu....................................................................	1
seq_371028_x39  ....................ucaccgggugaacaGuugcagu....................................................................	1
seq_375545_x10  ....................ucacNgggugaacacuugcagu....................................................................	1
seq_354892_x210 ....................ucaccgggugCacacuugcagu....................................................................	1
seq_362156_x140 ....................ucaccgggugaacacuugcaCu....................................................................	1
seq_364468_x114 ....................ucaccgUgugaacacuugcagu....................................................................	1
seq_366524_x92  ....................ucaccggguAaacacuugcagu....................................................................	1
seq_354469_x212 ....................ucaccggguUaacacuugcagu....................................................................	1
seq_331306_x853 ....................ucaccgggCgaacacuugcagu....................................................................	1
seq_359076_x170 ....................ucaccgggugaacacuCgcagu....................................................................	1
seq_365129_x106 ....................ucacUgggugaacacuugcagu....................................................................	1
seq_373223_x23  ....................ucacGgggugaacacuugcagu....................................................................	1
seq_371260_x37  ....................ucaccgggugaacacuugGagu....................................................................	1
seq_358731_x174 ....................ucaccgggugaacacuAgcagu....................................................................	1
seq_342045_x391 ....................ucaccgggugaacacuugcCgu....................................................................	1
seq_362296_x138 ....................ucaccgggugaacacuugcaUu....................................................................	1
seq_365339_x104 ....................ucaccgggugaacacuugAagu....................................................................	1
seq_372468_x28  ....................ucaccgggugaUcacuugcagu....................................................................	1
seq_372496_x27  ....................ucGccgggugaacacuugcagu....................................................................	1
seq_375565_x10  ....................ucaNcgggugaacacuugcagu....................................................................	1
seq_369188_x61  ....................ucaccgggugaCcacuugcagu....................................................................	1
seq_357284_x187 ....................ucaccgggugaacacuugcagA....................................................................	1
seq_367490_x83  ....................uNaccgggugaacacuugcagu....................................................................	1
seq_349174_x270 ....................ucaccgggugaacacuugcagC....................................................................	1
seq_368261_x70  ....................ucaccCggugaacacuugcagu....................................................................	1
seq_363098_x131 ....................ucaccgggugaacacGugcagu....................................................................	1
seq_377118_x3   ....................ucaccNggugaacacuugcagu....................................................................	1
seq_360848_x153 ....................ucaccgAgugaacacuugcagu....................................................................	1
seq_341170_x448 ....................ucaccgggugaacacuuUcagu....................................................................	1
seq_361297_x146 ....................ucaccAggugaacacuugcagu....................................................................	1
cel-miR-37      ....................ucaccgggugaacacuugcagu....................................................................	0
seq_366431_x93  ....................Ccaccgggugaacacuugcagu....................................................................	1
seq_376287_x6   ....................ucNccgggugaacacuugcagu....................................................................	1
seq_345299_x327 ....................ucaccgggugaacacuugcUgu....................................................................	1
seq_354041_x214 ....................uAaccgggugaacacuugcagu....................................................................	1
seq_363999_x122 ....................ucaccggguCaacacuugcagu....................................................................	1
seq_319013_x1597....................ucacAgggugaacacuugcagu....................................................................	1
seq_369126_x62  ....................ucaccgggugaacCcuugcagu....................................................................	1
seq_340154_x508 ....................ucaccgggugaacacuGgcagu....................................................................	1
seq_366337_x94  ....................ucaccggUugaacacuugcagu....................................................................	1
seq_372789_x26  ....................ucaccgggugaGcacuugcagu....................................................................	1
seq_364238_x115 ....................Gcaccgggugaacacuugcagu....................................................................	1
seq_377843_x1   ....................ucaccgggugaacacuuNcagu....................................................................	1
seq_365648_x102 ....................ucaccgggugUacacuugcagu....................................................................	1
seq_371480_x36  ....................ucCccgggugaacacuugcagu....................................................................	1
seq_362569_x133 ....................ucaccgggugaacacuugUagu....................................................................	1
seq_362434_x135 ....................ucaccgggugaacUcuugcagu....................................................................	1
seq_368190_x71  ....................Acaccgggugaacacuugcagu....................................................................	1
seq_330395_x911 ....................ucaccgggugaaNacuugcagu....................................................................	1
seq_370868_x40  ....................ucaccgggugaacGcuugcagu....................................................................	1
seq_323285_x1320....................ucaccgggGgaacacuugcagu....................................................................	1
seq_358020_x178 ....................ucaccggAugaacacuugcagu....................................................................	1
seq_375330_x11  ....................ucaccgggNgaacacuugcagu....................................................................	1
seq_369665_x55  ....................ucaccgggugaacacAugcagu....................................................................	1
seq_357471_x183 ....................ucaccgggugaacacCugcagu....................................................................	1
seq_368539_x67  ....................ucaccgggugaacacuugcGgu....................................................................	1
seq_377977_x1   ....................ucaccgggugaacacuugcagGg...................................................................	1
seq_377822_x1   ....................ucaAcgggugaacacuugcagug...................................................................	1
seq_377949_x1   ....................ucaccgggugaacacGugcagug...................................................................	1
seq_373861_x19  ....................ucaccgggugaacacuugcagug...................................................................	0
seq_373378_x22  ....................ucaccgggugaacacuugcaguC...................................................................	1
seq_325900_x1251....................ucaccgggugaacacuugcaguA...................................................................	1
seq_377687_x2   ....................ucaccgggugaacacuugcUgug...................................................................	1
seq_300758_x2851....................ucaccgggugaacacuugcaguU...................................................................	1
seq_378118_x1   ....................uAaccgggugaacacuugcagug...................................................................	1
seq_377256_x3   ....................ucaccgggugaacacuugcagugA..................................................................	1
seq_377858_x1   ....................ucaccgggugaacacuugcaguCg..................................................................	1
seq_378081_x1   ....................ucaccgggugaacacuugcaguAg..................................................................	1
seq_376855_x4   ....................ucaccgggugaacacuugcagugC..................................................................	1
seq_378276_x1   ....................ucaccgggugaacacuugcaguUg..................................................................	1
seq_377629_x2   ....................ucaccgggugaacacuugcagugg..................................................................	0
seq_378008_x1   ....................uUaccgggugaacacuugcaguggu.................................................................	1
seq_378261_x1   ....................ucaccgggugaacacuugcaguggu.................................................................	0
seq_377773_x1   ....................ucaccgggugaacacuugcaguggA.................................................................	1
seq_378246_x1   ....................ucaccgggugaacacuugcagugUu.................................................................	1
seq_377896_x1   ....................ucaccgggugaacacuugcaguggCc................................................................	1
seq_377447_x2   ....................ucaccgggugaacacuugcagugAuc................................................................	1
seq_378068_x1   ....................ucaccgggugaacacuugcaguggucA...............................................................	1
seq_377411_x2   ....................ucaccgggugaacacuugcagugguUc...............................................................	1
seq_377899_x1   .....................caccgggugaacacuugca......................................................................	0
seq_377943_x1   .....................caAcgggugaacacuugcag.....................................................................	1
seq_373131_x23  .....................caccgggugaacacuugcag.....................................................................	0
seq_377857_x1   .....................caccgggugaacaUuugcag.....................................................................	1
seq_377921_x1   .....................cGccgggugaacacuugcag.....................................................................	1
seq_376755_x4   .....................Uaccgggugaacacuugcagu....................................................................	1
seq_378164_x1   .....................caccgggugaacaAuugcagu....................................................................	1
seq_376419_x6   .....................caccgggAgaacacuugcagu....................................................................	1
seq_377715_x2   .....................caccgggugaacacuCgcagu....................................................................	1
seq_378030_x1   .....................caccgggugaacacuGgcagu....................................................................	1
seq_378016_x1   .....................caccggguCaacacuugcagu....................................................................	1
seq_377022_x3   .....................caccgggugaacacuugcagA....................................................................	1
seq_378214_x1   .....................caccgggugaCcacuugcagu....................................................................	1
seq_377835_x1   .....................caccgggugaacacNugcagu....................................................................	1
seq_378161_x1   .....................cacGgggugaacacuugcagu....................................................................	1
seq_374011_x18  .....................caccgggGgaacacuugcagu....................................................................	1
seq_377900_x1   .....................cNccgggugaacacuugcagu....................................................................	1
seq_376260_x7   .....................caccgggugaaAacuugcagu....................................................................	1
seq_348053_x285 .....................caccgggugaacacuugcagu....................................................................	0
seq_377795_x1   .....................caccAggugaacacuugcagu....................................................................	1
seq_377649_x2   .....................caccgggugaacacuuAcagu....................................................................	1
seq_377928_x1   .....................caccgggugaacacGugcagu....................................................................	1
seq_378111_x1   .....................caccgggugaacacuAgcagu....................................................................	1
seq_377202_x3   .....................caccgggugaacacuugcUgu....................................................................	1
seq_377904_x1   .....................cGccgggugaacacuugcagu....................................................................	1
seq_378018_x1   .....................caccgggugaacNcuugcagu....................................................................	1
seq_378263_x1   .....................caccgggugaaGacuugcagu....................................................................	1
seq_377990_x1   .....................cCccgggugaacacuugcagu....................................................................	1
seq_376553_x5   .....................caccgggCgaacacuugcagu....................................................................	1
seq_376688_x5   .....................caccgggugaacacuugcagC....................................................................	1
seq_377461_x2   .....................caccgggugaacacuuCcagu....................................................................	1
seq_377804_x1   .....................caccggAugaacacuugcagu....................................................................	1
seq_376086_x8   .....................caAcgggugaacacuugcagu....................................................................	1
seq_353384_x221 .....................caccgggugaacacuugcaguU...................................................................	1
seq_378003_x1   .....................caccgggugaacacuugcagCg...................................................................	1
seq_374439_x16  .....................caccgggugaacacuugcagug...................................................................	0
seq_361874_x141 .....................caccgggugaacacuugcaguA...................................................................	1
seq_377286_x3   .....................caccgggugaacacuugcaguC...................................................................	1
seq_378195_x1   .....................caccgggugaacacuugcagugU..................................................................	1
seq_378303_x1   .....................caccgggugaacacuugcagugC..................................................................	1
seq_378250_x1   .....................caccgggugaacacuugcaguUg..................................................................	1
seq_378188_x1   ......................accgggCgaacacuugca......................................................................	1
seq_378220_x1   ......................accgggugaacacAugca......................................................................	1
seq_376094_x8   ......................accgggugaacacuugca......................................................................	0
seq_370405_x44  ......................accgggugaacacuugcag.....................................................................	0
seq_377805_x1   ......................accCggugaacacuugcag.....................................................................	1
seq_377998_x1   ......................accggUugaacacuugcag.....................................................................	1
seq_378298_x1   ......................accgggugaacacuugcCg.....................................................................	1
seq_378052_x1   ......................aGcgggugaacacuugcag.....................................................................	1
seq_377965_x1   ......................accgggCgaacacuugcag.....................................................................	1
seq_378289_x1   ......................accgggugaacacCugcag.....................................................................	1
seq_378102_x1   ......................accgggAgaacacuugcag.....................................................................	1
seq_377184_x3   ......................accgggugaacacuugcagG....................................................................	1
seq_378152_x1   ......................accgggugaacaUuugcagu....................................................................	1
seq_374359_x16  ......................accgggGgaacacuugcagu....................................................................	1
seq_376473_x6   ......................accgCgugaacacuugcagu....................................................................	1
seq_377986_x1   ......................accgggugaacacuugGagu....................................................................	1
seq_378237_x1   ......................accgggugCacacuugcagu....................................................................	1
seq_377721_x2   ......................accgggugaacacuugUagu....................................................................	1
seq_375124_x12  ......................accCggugaacacuugcagu....................................................................	1
seq_373485_x21  ......................accgggugaacacuuUcagu....................................................................	1
seq_375721_x9   ......................accgggugaaAacuugcagu....................................................................	1
seq_377713_x2   ......................aAcgggugaacacuugcagu....................................................................	1
seq_376951_x4   ......................acAgggugaacacuugcagu....................................................................	1
seq_377609_x2   ......................accgggugaacacuAgcagu....................................................................	1
seq_377930_x1   ......................accggAugaacacuugcagu....................................................................	1
seq_375685_x9   ......................accgggugaacacuugcagC....................................................................	1
seq_377847_x1   ......................accgggugaaUacuugcagu....................................................................	1
seq_377661_x2   ......................accgggugaacacuGgcagu....................................................................	1
seq_333757_x746 ......................accgggugaacacuugcagu....................................................................	0
seq_378076_x1   ......................accgggugaacacCugcagu....................................................................	1
seq_378101_x1   ......................accgggugaaGacuugcagu....................................................................	1
seq_378307_x1   ......................accggCugaacacuugcagu....................................................................	1
seq_373108_x23  ......................accgggugaacacuugcCgu....................................................................	1
seq_376847_x4   ......................accggguCaacacuugcagu....................................................................	1
seq_377789_x1   ......................accgggugaacacuugcaUu....................................................................	1
seq_378184_x1   ......................accgggugaacacuugcUgu....................................................................	1
seq_377441_x2   ......................accAggugaacacuugcagu....................................................................	1
seq_377169_x3   ......................accgggugaacaAuugcagu....................................................................	1
seq_377671_x2   ......................accggguAaacacuugcagu....................................................................	1
seq_377172_x3   ......................accgAgugaacacuugcagu....................................................................	1
seq_375982_x8   ......................accgggugaacacuugcagA....................................................................	1
seq_376341_x6   ......................accgggugaacacuugAagu....................................................................	1
seq_375148_x12  ......................accgggAgaacacuugcagu....................................................................	1
seq_377973_x1   ......................Cccgggugaacacuugcagu....................................................................	1
seq_378156_x1   ......................accgggugaacGcuugcagu....................................................................	1
seq_377549_x2   ......................accgUgugaacacuugcagu....................................................................	1
seq_376598_x5   ......................accgggugaacacuugcaCu....................................................................	1
seq_377593_x2   ......................aGcgggugaacacuugcagu....................................................................	1
seq_377322_x3   ......................acUgggugaacacuugcagu....................................................................	1
seq_376823_x4   ......................accgggugaacCcuugcagu....................................................................	1
seq_378201_x1   ......................aUcgggugaacacuugcagu....................................................................	1
seq_377160_x3   ......................accggguUaacacuugcagu....................................................................	1
seq_378002_x1   ......................accgggugaacacuuAcagu....................................................................	1
seq_377226_x3   ......................accgggugaacacuuCcagu....................................................................	1
seq_377393_x2   ......................accgggugaacacGugcagu....................................................................	1
seq_376971_x4   ......................accgggugaacaNuugcagu....................................................................	1
seq_377601_x2   ......................accggUugaacacuugcagu....................................................................	1
seq_371920_x33  ......................accgggCgaacacuugcagu....................................................................	1
seq_377277_x3   ......................accgggugUacacuugcagu....................................................................	1
seq_377385_x2   ......................accUggugaacacuugcagu....................................................................	1
seq_377611_x2   ......................accgggugGacacuugcagu....................................................................	1
seq_378233_x1   ......................Uccgggugaacacuugcagu....................................................................	1
seq_372411_x29  ......................accgggugaacacuugcaguU...................................................................	1
seq_374519_x16  ......................accgggugaacacuugcaguA...................................................................	1
seq_378026_x1   ......................accgggugaacacuugcaguUg..................................................................	1
seq_378241_x1   .......................Ucgggugaacacuugcag.....................................................................	1
seq_377861_x1   .......................ccgggugaacacuugcag.....................................................................	0
seq_377301_x3   .......................ccgggugaacacuugcagu....................................................................	0
seq_377407_x2   .......................Ucgggugaacacuugcagu....................................................................	1
seq_377810_x1   ........................cgggCgaacacuugcagu....................................................................	1
seq_377232_x3   ........................cgggugaacacuugcagu....................................................................	0
seq_378012_x1   ........................................................cucugugaUccagguccugu..................................	1



>chrII:11534525-11540624_11
score total		       61011.7
score for star read(s)	           3.9
score for read counts	       61001.2
score for mfe		             2
score for randfold	           1.6
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	        119663
mature read count	        119545
loop read count		             0
star read count		           118
exp             fffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMffffffffffffffffff
obs             fffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMffffffffffffffffff
pri_seq         uuaaaaucgauucuagaaacccuuggaccaguguggguguccguugcggugcuacauucucuaaucuguaucaccgggugaacacuugcagugguccucgugguuucucu
pri_struct      ..............((((((((..((((((.((..(((((....(.(((((.((((..........)))).))))).)...)))))..)).))))))..).)))))))..	#MM
seq_378312_x1   .............................aguguggguguccguugcggugcua........................................................	0
seq_377115_x3   ..............................guguggguguccguugcggugcu.........................................................	0
seq_378105_x1   ...............................uguggguguccguugcgg.............................................................	0
seq_378286_x1   ...............................ugugggGguccguugcggu............................................................	1
seq_378185_x1   ...............................uguggguguccguugcUgug...........................................................	1
seq_378273_x1   ...............................uguggguguccguugcggug...........................................................	0
seq_378154_x1   ...............................uguggguguccguugcggugc..........................................................	0
seq_377931_x1   ...............................uguggguguccguugcggugAu.........................................................	1
seq_374757_x14  ...............................uguggguguccguugcggugcu.........................................................	0
seq_378090_x1   ...............................uguggguguccguugAggugcu.........................................................	1
seq_377449_x2   ...............................ugGggguguccguugcggugcua........................................................	1
seq_377794_x1   ...............................uguggguguccguugUggugcua........................................................	1
seq_377787_x1   ...............................uguggguguccgGugcggugcua........................................................	1
seq_378315_x1   ...............................uguggguguccguugcggCgcua........................................................	1
seq_378232_x1   ...............................uguggguCuccguugcggugcua........................................................	1
seq_367968_x76  ...............................uguggguguccguugcggugcua........................................................	0
seq_378200_x1   ...............................uguggguguccguugcggugcGa........................................................	1
seq_377774_x1   ...............................uguggguguccguugcggugUua........................................................	1
seq_378038_x1   ...............................ugugggugucAguugcggugcua........................................................	1
seq_378322_x1   ...............................uguggguguccguugcggugAua........................................................	1
seq_378007_x1   ...............................ugAggguguccguugcggugcua........................................................	1
seq_377837_x1   ...............................uguUgguguccguugcggugcua........................................................	1
seq_376613_x5   ...............................uguggguguccguugcggugcuU........................................................	1
seq_378182_x1   ..................................................................Gguaucaccgggugaacacuugcagu..................	1
seq_378210_x1   ....................................................................uaucaccgggugaacacuugca....................	0
seq_377082_x3   ....................................................................Aaucaccgggugaacacuugcag...................	1
seq_376915_x4   ....................................................................uaucaccgggugaacacuugcag...................	0
seq_378060_x1   ....................................................................uaucaccgggugaacacuugcagu..................	0
seq_367062_x87  ....................................................................Aaucaccgggugaacacuugcagu..................	1
seq_377289_x3   .....................................................................aucaccgggugaacacuugca....................	0
seq_377605_x2   .....................................................................Cucaccgggugaacacuugca....................	1
seq_378046_x1   .....................................................................aucaccgggugaacacGugca....................	1
seq_377844_x1   .....................................................................aucaccgggugaacacuugcaU...................	1
seq_373668_x20  .....................................................................aucaccgggugaacacuugcag...................	0
seq_373177_x23  .....................................................................Uucaccgggugaacacuugcag...................	1
seq_377762_x1   .....................................................................aucaAcgggugaacacuugcag...................	1
seq_377747_x1   .....................................................................aucaccgggugaacaAuugcag...................	1
seq_377997_x1   .....................................................................aucaccgggugaaUacuugcag...................	1
seq_378288_x1   .....................................................................aucaccgggGgaacacuugcag...................	1
seq_377521_x2   .....................................................................aucaccgggugaacacuugAagu..................	1
seq_376839_x4   .....................................................................aucaccgggGgaacacuugcagu..................	1
seq_368805_x66  .....................................................................Cucaccgggugaacacuugcagu..................	1
seq_377917_x1   .....................................................................Uucaccgggugaacacuugcagu..................	1
seq_378067_x1   .....................................................................aucaccggAugaacacuugcagu..................	1
seq_378230_x1   .....................................................................aucaccgggugaacacuugcGgu..................	1
seq_377709_x2   .....................................................................aucaccgggugaacacuugcCgu..................	1
seq_377954_x1   .....................................................................aucaccgggugaacacuCgcagu..................	1
seq_377772_x1   .....................................................................aucaAcgggugaacacuugcagu..................	1
seq_377800_x1   .....................................................................aucaccggUugaacacuugcagu..................	1
seq_377855_x1   .....................................................................aucaccgggugaacacuugcagA..................	1
seq_376775_x4   .....................................................................aucaccgggCgaacacuugcagu..................	1
seq_377782_x1   .....................................................................aucaccgggugaacacuugcUgu..................	1
seq_377963_x1   .....................................................................auGaccgggugaacacuugcagu..................	1
seq_377958_x1   .....................................................................aucaccgCgugaacacuugcagu..................	1
seq_376831_x4   .....................................................................aucaccgggAgaacacuugcagu..................	1
seq_378177_x1   .....................................................................aucaccgggugaacacuGgcagu..................	1
seq_377353_x2   .....................................................................aucaccgggugaacacuugcagC..................	1
seq_378037_x1   .....................................................................aucaccgAgugaacacuugcagu..................	1
seq_377639_x2   .....................................................................aucaccCggugaacacuugcagu..................	1
seq_358376_x178 .....................................................................aucaccgggugaacacuugcagu..................	0
seq_378265_x1   .....................................................................aucaccgggugaacCcuugcagu..................	1
seq_378165_x1   .....................................................................aucaccgggugaNcacuugcagu..................	1
seq_377783_x1   .....................................................................aucaccggCugaacacuugcagu..................	1
seq_377109_x3   .....................................................................aucaccgggugaacacuugcaUu..................	1
seq_377133_x3   .....................................................................aucaccgggugaacacuugcaguU.................	1
seq_377527_x2   .....................................................................aucaccgggugaacacuugcaguA.................	1
seq_377971_x1   ......................................................................ucaAcgggugaacacuug......................	1
seq_377445_x2   ......................................................................ucaccgggugaaGacuug......................	1
seq_378317_x1   ......................................................................uAaccgggugaacacuug......................	1
seq_378106_x1   ......................................................................ucaccgggugaaAacuug......................	1
seq_377951_x1   ......................................................................ucaccgggGgaacacuug......................	1
seq_378095_x1   ......................................................................Acaccgggugaacacuug......................	1
seq_377918_x1   ......................................................................ucaccgggugaacacuuU......................	1
seq_373608_x20  ......................................................................ucaccgggugaacacuug......................	0
seq_378005_x1   ......................................................................ucaccgggugaCcacuug......................	1
seq_378295_x1   ......................................................................ucaccgUgugaacacuug......................	1
seq_377897_x1   ......................................................................ucaccgggugaaGacuugc.....................	1
seq_373012_x24  ......................................................................ucaccgggugaacacuugc.....................	0
seq_378284_x1   ......................................................................ucaccgggugaacaGuugc.....................	1
seq_376461_x6   ......................................................................ucaccgAgugaacacuugca....................	1
seq_327151_x1237......................................................................ucaccgggugaacacuugca....................	0
seq_377912_x1   ......................................................................uNaccgggugaacacuugca....................	1
seq_376568_x5   ......................................................................ucaccggCugaacacuugca....................	1
seq_377829_x1   ......................................................................ucaccgggugaUcacuugca....................	1
seq_377473_x2   ......................................................................ucaccgggugaacacGugca....................	1
seq_376653_x5   ......................................................................ucaccUggugaacacuugca....................	1
seq_377553_x2   ......................................................................uUaccgggugaacacuugca....................	1
seq_377253_x3   ......................................................................ucaccgggugaacUcuugca....................	1
seq_377557_x2   ......................................................................ucacUgggugaacacuugca....................	1
seq_377830_x1   ......................................................................ucaccgggugaCcacuugca....................	1
seq_372988_x24  ......................................................................ucacAgggugaacacuugca....................	1
seq_378074_x1   ......................................................................ucaccgggugaaNacuugca....................	1
seq_377838_x1   ......................................................................ucaccgggugaacacuuNca....................	1
seq_377565_x2   ......................................................................ucaccgggugaacacuugcG....................	1
seq_378270_x1   ......................................................................Acaccgggugaacacuugca....................	1
seq_376751_x4   ......................................................................ucaccggUugaacacuugca....................	1
seq_376735_x4   ......................................................................ucaccgggugaacacuuUca....................	1
seq_378080_x1   ......................................................................ucaccgggugGacacuugca....................	1
seq_377555_x2   ......................................................................ucaUcgggugaacacuugca....................	1
seq_378238_x1   ......................................................................ucaccgggugaacacuCgca....................	1
seq_378205_x1   ......................................................................ucaccgggugaacacuugUa....................	1
seq_376795_x4   ......................................................................ucGccgggugaacacuugca....................	1
seq_377824_x1   ......................................................................Gcaccgggugaacacuugca....................	1
seq_377154_x3   ......................................................................ucaccggguUaacacuugca....................	1
seq_377335_x2   ......................................................................ucaAcgggugaacacuugca....................	1
seq_378299_x1   ......................................................................ucaccgggugaacGcuugca....................	1
seq_377405_x2   ......................................................................ucaccgggugaaGacuugca....................	1
seq_376543_x5   ......................................................................uGaccgggugaacacuugca....................	1
seq_377850_x1   ......................................................................ucaccggNugaacacuugca....................	1
seq_377397_x2   ......................................................................ucaccgUgugaacacuugca....................	1
seq_376443_x6   ......................................................................ucaccgggugaaUacuugca....................	1
seq_376078_x8   ......................................................................ucaccgggGgaacacuugca....................	1
seq_376663_x5   ......................................................................ucaccgggugaacacuugcU....................	1
seq_375385_x10  ......................................................................ucaccgggugaacacuGgca....................	1
seq_376783_x4   ......................................................................ucaccgggugaacacuuAca....................	1
seq_378034_x1   ......................................................................ucaccgggugCacacuugca....................	1
seq_373975_x18  ......................................................................ucaccgggAgaacacuugca....................	1
seq_377802_x1   ......................................................................ucaccgggugaacacCugca....................	1
seq_378327_x1   ......................................................................ucaccgggugaacacuugAa....................	1
seq_377757_x1   ......................................................................ucaccggguCaacacuugca....................	1
seq_376943_x4   ......................................................................ucaccgggugaacaAuugca....................	1
seq_377615_x2   ......................................................................uAaccgggugaacacuugca....................	1
seq_375883_x9   ......................................................................ucaccgCgugaacacuugca....................	1
seq_377821_x1   ......................................................................ucaccgggugaacCcuugca....................	1
seq_377148_x3   ......................................................................ucaccgggugaacacuuCca....................	1
seq_378321_x1   ......................................................................ucaccCggugaacacuugca....................	1
seq_374729_x14  ......................................................................ucaccgggugaaAacuugca....................	1
seq_377541_x2   ......................................................................ucaccggAugaacacuugca....................	1
seq_377190_x3   ......................................................................ucaccgggugaacacuAgca....................	1
seq_377667_x2   ......................................................................ucaGcgggugaacacuugca....................	1
seq_377891_x1   ......................................................................ucaccAggugaacacuugca....................	1
seq_377046_x3   ......................................................................ucaccgggugaacaGuugca....................	1
seq_375220_x11  ......................................................................ucaccgggCgaacacuugca....................	1
seq_376573_x5   ......................................................................ucaccgggugaaGacuugcag...................	1
seq_375990_x8   ......................................................................ucaccggCugaacacuugcag...................	1
seq_372737_x26  ......................................................................ucaccgCgugaacacuugcag...................	1
seq_376155_x7   ......................................................................Ccaccgggugaacacuugcag...................	1
seq_377265_x3   ......................................................................uUaccgggugaacacuugcag...................	1
seq_376521_x6   ......................................................................uAaccgggugaacacuugcag...................	1
seq_378103_x1   ......................................................................ucNccgggugaacacuugcag...................	1
seq_376923_x4   ......................................................................ucaccgggugaacacAugcag...................	1
seq_375184_x12  ......................................................................ucaccgggugaacacuugcUg...................	1
seq_377779_x1   ......................................................................ucaccgggugaacaGuugcag...................	1
seq_377547_x2   ......................................................................ucaccgggugaacacuugcaA...................	1
seq_377025_x3   ......................................................................ucUccgggugaacacuugcag...................	1
seq_377788_x1   ......................................................................ucaccgggugaacacuNgcag...................	1
seq_373937_x19  ......................................................................ucaccgggugaacacuuUcag...................	1
seq_376563_x5   ......................................................................ucaccgUgugaacacuugcag...................	1
seq_377651_x2   ......................................................................ucaccgggugaGcacuugcag...................	1
seq_378132_x1   ......................................................................ucacGgggugaacacuugcag...................	1
seq_372890_x25  ......................................................................ucaccgggugaacaAuugcag...................	1
seq_374771_x14  ......................................................................ucaccgggugaacacuGgcag...................	1
seq_377437_x2   ......................................................................ucaGcgggugaacacuugcag...................	1
seq_378036_x1   ......................................................................ucaccCggugaacacuugcag...................	1
seq_376347_x6   ......................................................................ucaccgAgugaacacuugcag...................	1
seq_377515_x2   ......................................................................ucaccgggugaacCcuugcag...................	1
seq_376807_x4   ......................................................................ucaccgggugUacacuugcag...................	1
seq_370787_x41  ......................................................................ucaccgggCgaacacuugcag...................	1
seq_375308_x11  ......................................................................ucaccgggugaacacCugcag...................	1
seq_376253_x7   ......................................................................ucaccggguUaacacuugcag...................	1
seq_378309_x1   ......................................................................ucaccgggugaacacuuAcag...................	1
seq_367812_x78  ......................................................................ucacAgggugaacacuugcag...................	1
seq_376931_x4   ......................................................................ucaccgggugGacacuugcag...................	1
seq_376274_x7   ......................................................................ucaccggguAaacacuugcag...................	1
seq_376911_x4   ......................................................................ucaccggUugaacacuugcag...................	1
seq_376126_x8   ......................................................................ucaccUggugaacacuugcag...................	1
seq_376583_x5   ......................................................................ucaccgggugaacacGugcag...................	1
seq_372173_x31  ......................................................................ucaccgggugaaNacuugcag...................	1
seq_376643_x5   ......................................................................ucaccgggugCacacuugcag...................	1
seq_376668_x5   ......................................................................ucaccgggugaacaUuugcag...................	1
seq_296962_x3796......................................................................ucaccgggugaacacuugcag...................	0
seq_375958_x8   ......................................................................ucaccgggugaacacuugUag...................	1
seq_376588_x5   ......................................................................ucaUcgggugaacacuugcag...................	1
seq_375793_x9   ......................................................................ucaccgggugaacacuugcCg...................	1
seq_377729_x2   ......................................................................ucaccgggugaUcacuugcag...................	1
seq_375415_x10  ......................................................................ucaccgggugaacacuugAag...................	1
seq_377067_x3   ......................................................................ucaccgggugaCcacuugcag...................	1
seq_376603_x5   ......................................................................Acaccgggugaacacuugcag...................	1
seq_376425_x6   ......................................................................ucaccgggugaacacuAgcag...................	1
seq_376162_x7   ......................................................................Gcaccgggugaacacuugcag...................	1
seq_377333_x2   ......................................................................uNaccgggugaacacuugcag...................	1
seq_376070_x8   ......................................................................ucaccgggugaacacuugcaC...................	1
seq_377786_x1   ......................................................................ucaccgggugaacacuugcGg...................	1
seq_377723_x2   ......................................................................ucGccgggugaacacuugcag...................	1
seq_373246_x22  ......................................................................ucaccgggugaaAacuugcag...................	1
seq_376389_x6   ......................................................................ucaccAggugaacacuugcag...................	1
seq_377355_x2   ......................................................................ucaccgggugaacacuugGag...................	1
seq_377295_x3   ......................................................................ucaccgggugaacacuCgcag...................	1
seq_377435_x2   ......................................................................ucaccggguCaacacuugcag...................	1
seq_376835_x4   ......................................................................ucaccggAugaacacuugcag...................	1
seq_378141_x1   ......................................................................ucaccggNugaacacuugcag...................	1
seq_376204_x7   ......................................................................ucaccgggugaacacuuCcag...................	1
seq_371788_x33  ......................................................................ucaccgggAgaacacuugcag...................	1
seq_375535_x10  ......................................................................ucaccgggugaacUcuugcag...................	1
seq_375766_x9   ......................................................................ucaccgggugaaUacuugcag...................	1
seq_369371_x60  ......................................................................ucaccgggGgaacacuugcag...................	1
seq_374375_x16  ......................................................................ucaccgggugaacacuugcaU...................	1
seq_376983_x4   ......................................................................ucCccgggugaacacuugcag...................	1
seq_376176_x7   ......................................................................ucaccgggugaacacuugNag...................	1
seq_376593_x5   ......................................................................uGaccgggugaacacuugcag...................	1
seq_376190_x7   ......................................................................ucacUgggugaacacuugcag...................	1
seq_375625_x10  ......................................................................ucaAcgggugaacacuugcag...................	1
seq_360848_x153 ......................................................................ucaccgAgugaacacuugcagu..................	1
seq_375545_x10  ......................................................................ucacNgggugaacacuugcagu..................	1
seq_358020_x178 ......................................................................ucaccggAugaacacuugcagu..................	1
seq_375330_x11  ......................................................................ucaccgggNgaacacuugcagu..................	1
seq_362156_x140 ......................................................................ucaccgggugaacacuugcaCu..................	1
seq_323285_x1320......................................................................ucaccgggGgaacacuugcagu..................	1
seq_366524_x92  ......................................................................ucaccggguAaacacuugcagu..................	1
seq_364238_x115 ......................................................................Gcaccgggugaacacuugcagu..................	1
seq_354892_x210 ......................................................................ucaccgggugCacacuugcagu..................	1
seq_361001_x150 ......................................................................ucaccgggugaacacuuCcagu..................	1
seq_368261_x70  ......................................................................ucaccCggugaacacuugcagu..................	1
seq_359745_x162 ......................................................................ucaccgggugGacacuugcagu..................	1
seq_345299_x327 ......................................................................ucaccgggugaacacuugcUgu..................	1
seq_369126_x62  ......................................................................ucaccgggugaacCcuugcagu..................	1
seq_377843_x1   ......................................................................ucaccgggugaacacuuNcagu..................	1
seq_369064_x62  ......................................................................ucaccgggugaacacuugcaAu..................	1
seq_357471_x183 ......................................................................ucaccgggugaacacCugcagu..................	1
seq_362296_x138 ......................................................................ucaccgggugaacacuugcaUu..................	1
seq_376287_x6   ......................................................................ucNccgggugaacacuugcagu..................	1
seq_372789_x26  ......................................................................ucaccgggugaGcacuugcagu..................	1
cel-miR-37      ......................................................................ucaccgggugaacacuugcagu..................	0
seq_371028_x39  ......................................................................ucaccgggugaacaGuugcagu..................	1
seq_367490_x83  ......................................................................uNaccgggugaacacuugcagu..................	1
seq_357284_x187 ......................................................................ucaccgggugaacacuugcagA..................	1
seq_341170_x448 ......................................................................ucaccgggugaacacuuUcagu..................	1
seq_332159_x841 ......................................................................ucaccgggAgaacacuugcagu..................	1
seq_342045_x391 ......................................................................ucaccgggugaacacuugcCgu..................	1
seq_370868_x40  ......................................................................ucaccgggugaacGcuugcagu..................	1
seq_372468_x28  ......................................................................ucaccgggugaUcacuugcagu..................	1
seq_335193_x686 ......................................................................ucaccgggugaaAacuugcagu..................	1
seq_361297_x146 ......................................................................ucaccAggugaacacuugcagu..................	1
seq_330395_x911 ......................................................................ucaccgggugaaNacuugcagu..................	1
seq_341618_x427 ......................................................................ucaccgggugaacaAuugcagu..................	1
seq_371222_x38  ......................................................................ucaccggNugaacacuugcagu..................	1
seq_356323_x196 ......................................................................ucaccgggugaaUacuugcagu..................	1
seq_352711_x226 ......................................................................ucaccgggugaaGacuugcagu..................	1
seq_362434_x135 ......................................................................ucaccgggugaacUcuugcagu..................	1
seq_349174_x270 ......................................................................ucaccgggugaacacuugcagC..................	1
seq_363749_x128 ......................................................................ucaUcgggugaacacuugcagu..................	1
seq_354041_x214 ......................................................................uAaccgggugaacacuugcagu..................	1
seq_365022_x107 ......................................................................uUaccgggugaacacuugcagu..................	1
seq_331306_x853 ......................................................................ucaccgggCgaacacuugcagu..................	1
seq_363491_x129 ......................................................................ucaccgggugaacacuuAcagu..................	1
seq_366431_x93  ......................................................................Ccaccgggugaacacuugcagu..................	1
seq_335879_x674 ......................................................................ucaccgCgugaacacuugcagu..................	1
seq_365648_x102 ......................................................................ucaccgggugUacacuugcagu..................	1
seq_371260_x37  ......................................................................ucaccgggugaacacuugGagu..................	1
seq_363999_x122 ......................................................................ucaccggguCaacacuugcagu..................	1
seq_375694_x9   ......................................................................Ncaccgggugaacacuugcagu..................	1
seq_368190_x71  ......................................................................Acaccgggugaacacuugcagu..................	1
seq_354469_x212 ......................................................................ucaccggguUaacacuugcagu..................	1
seq_358731_x174 ......................................................................ucaccgggugaacacuAgcagu..................	1
seq_360693_x155 ......................................................................ucaccgggugaacacuugNagu..................	1
seq_375565_x10  ......................................................................ucaNcgggugaacacuugcagu..................	1
seq_363098_x131 ......................................................................ucaccgggugaacacGugcagu..................	1
seq_319013_x1597......................................................................ucacAgggugaacacuugcagu..................	1
seq_356905_x190 ......................................................................ucaccUggugaacacuugcagu..................	1
seq_340154_x508 ......................................................................ucaccgggugaacacuGgcagu..................	1
seq_355311_x207 ......................................................................ucaccggCugaacacuugcagu..................	1
seq_149538_x90904......................................................................ucaccgggugaacacuugcagu..................	0
seq_366051_x97  ......................................................................ucaccgggugaacaUuugcagu..................	1
seq_373223_x23  ......................................................................ucacGgggugaacacuugcagu..................	1
seq_364468_x114 ......................................................................ucaccgUgugaacacuugcagu..................	1
seq_375974_x8   ......................................................................ucUccgggugaacacuugcagu..................	1
seq_363877_x122 ......................................................................ucaccgggugaacacuNgcagu..................	1
seq_368539_x67  ......................................................................ucaccgggugaacacuugcGgu..................	1
seq_377118_x3   ......................................................................ucaccNggugaacacuugcagu..................	1
seq_344621_x340 ......................................................................ucaAcgggugaacacuugcagu..................	1
seq_367149_x86  ......................................................................ucaGcgggugaacacuugcagu..................	1
seq_372496_x27  ......................................................................ucGccgggugaacacuugcagu..................	1
seq_369665_x55  ......................................................................ucaccgggugaacacAugcagu..................	1
seq_366337_x94  ......................................................................ucaccggUugaacacuugcagu..................	1
seq_362569_x133 ......................................................................ucaccgggugaacacuugUagu..................	1
seq_365339_x104 ......................................................................ucaccgggugaacacuugAagu..................	1
seq_369188_x61  ......................................................................ucaccgggugaCcacuugcagu..................	1
seq_371480_x36  ......................................................................ucCccgggugaacacuugcagu..................	1
seq_351534_x242 ......................................................................ucaccgggugaacacuugcagG..................	1
seq_365129_x106 ......................................................................ucacUgggugaacacuugcagu..................	1
seq_365443_x103 ......................................................................uGaccgggugaacacuugcagu..................	1
seq_359076_x170 ......................................................................ucaccgggugaacacuCgcagu..................	1
seq_300758_x2851......................................................................ucaccgggugaacacuugcaguU.................	1
seq_377949_x1   ......................................................................ucaccgggugaacacGugcagug.................	1
seq_377822_x1   ......................................................................ucaAcgggugaacacuugcagug.................	1
seq_373861_x19  ......................................................................ucaccgggugaacacuugcagug.................	0
seq_373378_x22  ......................................................................ucaccgggugaacacuugcaguC.................	1
seq_377687_x2   ......................................................................ucaccgggugaacacuugcUgug.................	1
seq_377977_x1   ......................................................................ucaccgggugaacacuugcagGg.................	1
seq_378118_x1   ......................................................................uAaccgggugaacacuugcagug.................	1
seq_325900_x1251......................................................................ucaccgggugaacacuugcaguA.................	1
seq_376855_x4   ......................................................................ucaccgggugaacacuugcagugC................	1
seq_377858_x1   ......................................................................ucaccgggugaacacuugcaguCg................	1
seq_378276_x1   ......................................................................ucaccgggugaacacuugcaguUg................	1
seq_377629_x2   ......................................................................ucaccgggugaacacuugcagugg................	0
seq_378081_x1   ......................................................................ucaccgggugaacacuugcaguAg................	1
seq_377256_x3   ......................................................................ucaccgggugaacacuugcagugA................	1
seq_378246_x1   ......................................................................ucaccgggugaacacuugcagugUu...............	1
seq_378008_x1   ......................................................................uUaccgggugaacacuugcaguggu...............	1
seq_378261_x1   ......................................................................ucaccgggugaacacuugcaguggu...............	0
seq_377773_x1   ......................................................................ucaccgggugaacacuugcaguggA...............	1
seq_377896_x1   ......................................................................ucaccgggugaacacuugcaguggCc..............	1
seq_377447_x2   ......................................................................ucaccgggugaacacuugcagugAuc..............	1
seq_377411_x2   ......................................................................ucaccgggugaacacuugcagugguUc.............	1
seq_378068_x1   ......................................................................ucaccgggugaacacuugcaguggucA.............	1
seq_377899_x1   .......................................................................caccgggugaacacuugca....................	0
seq_373131_x23  .......................................................................caccgggugaacacuugcag...................	0
seq_377921_x1   .......................................................................cGccgggugaacacuugcag...................	1
seq_377857_x1   .......................................................................caccgggugaacaUuugcag...................	1
seq_377943_x1   .......................................................................caAcgggugaacacuugcag...................	1
seq_378214_x1   .......................................................................caccgggugaCcacuugcagu..................	1
seq_374011_x18  .......................................................................caccgggGgaacacuugcagu..................	1
seq_377835_x1   .......................................................................caccgggugaacacNugcagu..................	1
seq_378263_x1   .......................................................................caccgggugaaGacuugcagu..................	1
seq_378018_x1   .......................................................................caccgggugaacNcuugcagu..................	1
seq_376086_x8   .......................................................................caAcgggugaacacuugcagu..................	1
seq_377900_x1   .......................................................................cNccgggugaacacuugcagu..................	1
seq_377928_x1   .......................................................................caccgggugaacacGugcagu..................	1
seq_377461_x2   .......................................................................caccgggugaacacuuCcagu..................	1
seq_376688_x5   .......................................................................caccgggugaacacuugcagC..................	1
seq_376260_x7   .......................................................................caccgggugaaAacuugcagu..................	1
seq_378164_x1   .......................................................................caccgggugaacaAuugcagu..................	1
seq_377715_x2   .......................................................................caccgggugaacacuCgcagu..................	1
seq_378016_x1   .......................................................................caccggguCaacacuugcagu..................	1
seq_376755_x4   .......................................................................Uaccgggugaacacuugcagu..................	1
seq_377795_x1   .......................................................................caccAggugaacacuugcagu..................	1
seq_377649_x2   .......................................................................caccgggugaacacuuAcagu..................	1
seq_376553_x5   .......................................................................caccgggCgaacacuugcagu..................	1
seq_377804_x1   .......................................................................caccggAugaacacuugcagu..................	1
seq_378111_x1   .......................................................................caccgggugaacacuAgcagu..................	1
seq_377022_x3   .......................................................................caccgggugaacacuugcagA..................	1
seq_378030_x1   .......................................................................caccgggugaacacuGgcagu..................	1
seq_376419_x6   .......................................................................caccgggAgaacacuugcagu..................	1
seq_377990_x1   .......................................................................cCccgggugaacacuugcagu..................	1
seq_348053_x285 .......................................................................caccgggugaacacuugcagu..................	0
seq_377904_x1   .......................................................................cGccgggugaacacuugcagu..................	1
seq_377202_x3   .......................................................................caccgggugaacacuugcUgu..................	1
seq_378161_x1   .......................................................................cacGgggugaacacuugcagu..................	1
seq_378003_x1   .......................................................................caccgggugaacacuugcagCg.................	1
seq_353384_x221 .......................................................................caccgggugaacacuugcaguU.................	1
seq_361874_x141 .......................................................................caccgggugaacacuugcaguA.................	1
seq_374439_x16  .......................................................................caccgggugaacacuugcagug.................	0
seq_377286_x3   .......................................................................caccgggugaacacuugcaguC.................	1
seq_378303_x1   .......................................................................caccgggugaacacuugcagugC................	1
seq_378195_x1   .......................................................................caccgggugaacacuugcagugU................	1
seq_378250_x1   .......................................................................caccgggugaacacuugcaguUg................	1
seq_376094_x8   ........................................................................accgggugaacacuugca....................	0
seq_378188_x1   ........................................................................accgggCgaacacuugca....................	1
seq_378220_x1   ........................................................................accgggugaacacAugca....................	1
seq_378102_x1   ........................................................................accgggAgaacacuugcag...................	1
seq_377805_x1   ........................................................................accCggugaacacuugcag...................	1
seq_378298_x1   ........................................................................accgggugaacacuugcCg...................	1
seq_377965_x1   ........................................................................accgggCgaacacuugcag...................	1
seq_370405_x44  ........................................................................accgggugaacacuugcag...................	0
seq_378289_x1   ........................................................................accgggugaacacCugcag...................	1
seq_377998_x1   ........................................................................accggUugaacacuugcag...................	1
seq_378052_x1   ........................................................................aGcgggugaacacuugcag...................	1
seq_377609_x2   ........................................................................accgggugaacacuAgcagu..................	1
seq_377671_x2   ........................................................................accggguAaacacuugcagu..................	1
seq_378237_x1   ........................................................................accgggugCacacuugcagu..................	1
seq_375721_x9   ........................................................................accgggugaaAacuugcagu..................	1
seq_333757_x746 ........................................................................accgggugaacacuugcagu..................	0
seq_378184_x1   ........................................................................accgggugaacacuugcUgu..................	1
seq_377441_x2   ........................................................................accAggugaacacuugcagu..................	1
seq_378101_x1   ........................................................................accgggugaaGacuugcagu..................	1
seq_377611_x2   ........................................................................accgggugGacacuugcagu..................	1
seq_377721_x2   ........................................................................accgggugaacacuugUagu..................	1
seq_378156_x1   ........................................................................accgggugaacGcuugcagu..................	1
seq_376847_x4   ........................................................................accggguCaacacuugcagu..................	1
seq_377385_x2   ........................................................................accUggugaacacuugcagu..................	1
seq_378307_x1   ........................................................................accggCugaacacuugcagu..................	1
seq_378076_x1   ........................................................................accgggugaacacCugcagu..................	1
seq_376823_x4   ........................................................................accgggugaacCcuugcagu..................	1
seq_375685_x9   ........................................................................accgggugaacacuugcagC..................	1
seq_377160_x3   ........................................................................accggguUaacacuugcagu..................	1
seq_377661_x2   ........................................................................accgggugaacacuGgcagu..................	1
seq_377601_x2   ........................................................................accggUugaacacuugcagu..................	1
seq_377172_x3   ........................................................................accgAgugaacacuugcagu..................	1
seq_376473_x6   ........................................................................accgCgugaacacuugcagu..................	1
seq_375982_x8   ........................................................................accgggugaacacuugcagA..................	1
seq_373108_x23  ........................................................................accgggugaacacuugcCgu..................	1
seq_377549_x2   ........................................................................accgUgugaacacuugcagu..................	1
seq_375124_x12  ........................................................................accCggugaacacuugcagu..................	1
seq_377226_x3   ........................................................................accgggugaacacuuCcagu..................	1
seq_377847_x1   ........................................................................accgggugaaUacuugcagu..................	1
seq_377973_x1   ........................................................................Cccgggugaacacuugcagu..................	1
seq_378201_x1   ........................................................................aUcgggugaacacuugcagu..................	1
seq_373485_x21  ........................................................................accgggugaacacuuUcagu..................	1
seq_377169_x3   ........................................................................accgggugaacaAuugcagu..................	1
seq_376598_x5   ........................................................................accgggugaacacuugcaCu..................	1
seq_377277_x3   ........................................................................accgggugUacacuugcagu..................	1
seq_371920_x33  ........................................................................accgggCgaacacuugcagu..................	1
seq_376971_x4   ........................................................................accgggugaacaNuugcagu..................	1
seq_377789_x1   ........................................................................accgggugaacacuugcaUu..................	1
seq_377184_x3   ........................................................................accgggugaacacuugcagG..................	1
seq_374359_x16  ........................................................................accgggGgaacacuugcagu..................	1
seq_377393_x2   ........................................................................accgggugaacacGugcagu..................	1
seq_378233_x1   ........................................................................Uccgggugaacacuugcagu..................	1
seq_377986_x1   ........................................................................accgggugaacacuugGagu..................	1
seq_378002_x1   ........................................................................accgggugaacacuuAcagu..................	1
seq_377593_x2   ........................................................................aGcgggugaacacuugcagu..................	1
seq_378152_x1   ........................................................................accgggugaacaUuugcagu..................	1
seq_377713_x2   ........................................................................aAcgggugaacacuugcagu..................	1
seq_375148_x12  ........................................................................accgggAgaacacuugcagu..................	1
seq_376951_x4   ........................................................................acAgggugaacacuugcagu..................	1
seq_377322_x3   ........................................................................acUgggugaacacuugcagu..................	1
seq_376341_x6   ........................................................................accgggugaacacuugAagu..................	1
seq_377930_x1   ........................................................................accggAugaacacuugcagu..................	1
seq_374519_x16  ........................................................................accgggugaacacuugcaguA.................	1
seq_372411_x29  ........................................................................accgggugaacacuugcaguU.................	1
seq_378026_x1   ........................................................................accgggugaacacuugcaguUg................	1
seq_377861_x1   .........................................................................ccgggugaacacuugcag...................	0
seq_378241_x1   .........................................................................Ucgggugaacacuugcag...................	1
seq_377301_x3   .........................................................................ccgggugaacacuugcagu..................	0
seq_377407_x2   .........................................................................Ucgggugaacacuugcagu..................	1
seq_377810_x1   ..........................................................................cgggCgaacacuugcagu..................	1
seq_377232_x3   ..........................................................................cgggugaacacuugcagu..................	0



>chrII:11534525-11540624_17
score total		       17007.3
score for star read(s)	           3.9
score for read counts	       16996.7
score for mfe		           2.1
score for randfold	           1.6
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	         33350
mature read count	         33300
loop read count		             0
star read count		            50
exp             ffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSlllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMfffffffffffffffffff
obs             ffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSlllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMfffffffffffffffffff
pri_seq         uggugucuccgaaccuccuguccgcaccucaguggauguaugccaugaugauaagauaucagaaauccuaucaccggguguacaucagcuaaggugcggguacaggugcau
pri_struct      .(((........))).(((((((((((((.(((.((((((((((.((.(((((.(((.......))).))))).)))))))))))).))).))))))))..))))).....	#MM
seq_377533_x2   ..............................aguggauguaugccaugaugau...........................................................	0
seq_378330_x1   ..............................aguggUuguaugccaugaugaua..........................................................	1
seq_372324_x29  ..............................aguggauguaugccaugaugaua..........................................................	0
seq_377836_x1   ..............................aguggauguaugccaugUugaua..........................................................	1
seq_377982_x1   ..............................aguggauguaugcUaugaugaua..........................................................	1
seq_377969_x1   ..............................aguggauguaugccaugaAgaua..........................................................	1
seq_377763_x1   ..............................aguggauguaugccauUaugaua..........................................................	1
seq_378104_x1   ..............................aguggauguUugccaugaugaua..........................................................	1
seq_377950_x1   ..............................aguggauguauUccaugaugaua..........................................................	1
seq_378126_x1   ..............................aguggauguaugccaugaugauG..........................................................	1
seq_378062_x1   ..............................aguggauguaugccaugaugCua..........................................................	1
seq_377681_x2   ..............................aguggaugGaugccaugaugaua..........................................................	1
seq_377987_x1   ..............................aguggauguaugccaugaugGua..........................................................	1
seq_376329_x6   ..............................aguggauguaugccaugaugauaU.........................................................	1
seq_378173_x1   ...............................guggauguaugccaugaugauaaga.......................................................	0
seq_378011_x1   ..................................................................ccGaucaccggguguacaucagcu.....................	1
seq_377862_x1   ...................................................................cuaucaccggguguacaucag.......................	0
seq_377748_x1   ...................................................................Auaucaccggguguacaucagc......................	1
seq_375595_x10  ...................................................................cuaucaccggguguacaucagc......................	0
seq_377699_x2   ...................................................................cuaucaccggguguacaucagcu.....................	0
seq_377832_x1   ...................................................................cuaucaccggguguacaucagUu.....................	1
seq_378096_x1   ...................................................................cuaucaccggguguacaGcagcu.....................	1
seq_377817_x1   ...................................................................cuaucaccggguguacaucagcA.....................	1
seq_378035_x1   ...................................................................cCaucaccggguguacaucagcuaa...................	1
seq_377679_x2   ....................................................................Aaucaccggguguacaucagcu.....................	1
seq_369825_x52  ....................................................................Aaucaccggguguacaucagcuaa...................	1
seq_377760_x1   .....................................................................aucaccggguguacaucag.......................	0
seq_378000_x1   .....................................................................Cucaccggguguacaucagcua....................	1
seq_378278_x1   .....................................................................aucaccggguguacaucaCcua....................	1
seq_376431_x6   .....................................................................aucaccggguguacaucagcua....................	0
seq_377784_x1   .....................................................................aucaccggguguacaucaUcuaa...................	1
seq_371721_x34  .....................................................................aucaccggguguacaucagcuaa...................	0
seq_378142_x1   .....................................................................aGcaccggguguacaucagcuaa...................	1
seq_378021_x1   .....................................................................aAcaccggguguacaucagcuaa...................	1
seq_377769_x1   .....................................................................aucaccgggAguacaucagcuaa...................	1
seq_374423_x16  .....................................................................Cucaccggguguacaucagcuaa...................	1
seq_378169_x1   .....................................................................aucaccCgguguacaucagcuaa...................	1
seq_377968_x1   .....................................................................aucaAcggguguacaucagcuaa...................	1
seq_377627_x2   .....................................................................aucaccggguguacaucagcuaaA..................	1
seq_377489_x2   .....................................................................aucaccggguguacaucagcuaaU..................	1
seq_378296_x1   ......................................................................ucaccggUuguacaucag.......................	1
seq_377770_x1   ......................................................................ucaccggguguacaucNg.......................	1
seq_377477_x2   ......................................................................ucaccggguguacaucaA.......................	1
seq_372550_x27  ......................................................................ucaccggguguacaucag.......................	0
seq_368936_x64  ......................................................................ucaccggguguacaucagc......................	0
seq_377979_x1   ......................................................................ucaccggguguaNaucagc......................	1
seq_377984_x1   ......................................................................ucaccggguguacaucaUc......................	1
seq_377865_x1   ......................................................................ucaccggguguacaucaAc......................	1
seq_377751_x1   ......................................................................ucaccgggCguacaucagc......................	1
seq_378287_x1   ......................................................................ucaccgggugGacaucagc......................	1
seq_377845_x1   ......................................................................ucaccgggGguacaucagc......................	1
seq_377833_x1   ......................................................................ucaccgggugCacaucagc......................	1
seq_378221_x1   ......................................................................ucaccggguguacCucagc......................	1
seq_378110_x1   ......................................................................ucacUggguguacaucagc......................	1
seq_377981_x1   ......................................................................ucaccggguguaUaucagcu.....................	1
seq_378183_x1   ......................................................................ucaccggguguaNaucagcu.....................	1
seq_378231_x1   ......................................................................ucaccggguguacaucagGu.....................	1
seq_377689_x2   ......................................................................ucaccggguguacaucaUcu.....................	1
seq_378193_x1   ......................................................................ucaccggguguacaGcagcu.....................	1
seq_377823_x1   ......................................................................ucaccgggugCacaucagcu.....................	1
seq_377826_x1   ......................................................................ucaccgggCguacaucagcu.....................	1
seq_357837_x183 ......................................................................ucaccggguguacaucagcu.....................	0
seq_378217_x1   ......................................................................ucaccgggGguacaucagcu.....................	1
seq_377799_x1   ......................................................................ucaccggguguacauAagcu.....................	1
seq_377485_x2   ......................................................................ucaccgggugGacaucagcu.....................	1
seq_377942_x1   ......................................................................ucaccgggugAacaucagcu.....................	1
seq_376359_x6   ......................................................................ucacAggguguacaucagcu.....................	1
seq_378125_x1   ......................................................................ucaccggguguacUucagcu.....................	1
seq_377759_x1   ......................................................................ucaccggguguacaucagUu.....................	1
seq_378324_x1   ......................................................................ucaccggguguacaCcagcu.....................	1
seq_378274_x1   ......................................................................ucaccUgguguacaucagcu.....................	1
seq_377967_x1   ......................................................................ucaccggguguacaucaCcua....................	1
seq_375775_x9   ......................................................................ucaccgggugCacaucagcua....................	1
seq_377926_x1   ......................................................................ucaccggguguacaucUgcua....................	1
seq_377028_x3   ......................................................................ucaccggguguacaucagNua....................	1
seq_377911_x1   ......................................................................ucaccggguCuacaucagcua....................	1
seq_377625_x2   ......................................................................ucaccggguguaUaucagcua....................	1
seq_377735_x2   ......................................................................ucaccggguguaGaucagcua....................	1
seq_378240_x1   ......................................................................ucaccggguguacauGagcua....................	1
seq_377703_x2   ......................................................................Gcaccggguguacaucagcua....................	1
seq_376299_x6   ......................................................................ucaccgggCguacaucagcua....................	1
seq_377091_x3   ......................................................................ucaccggguguacaucagcuC....................	1
seq_378044_x1   ......................................................................ucaccggguguacaGcagcua....................	1
seq_377016_x3   ......................................................................ucaccgggugGacaucagcua....................	1
seq_377040_x3   ......................................................................ucaccgggugAacaucagcua....................	1
seq_377587_x2   ......................................................................ucaccggguguacaucagcGa....................	1
seq_377677_x2   ......................................................................ucaccggguUuacaucagcua....................	1
seq_377316_x3   ......................................................................ucaccggguguacaucagcAa....................	1
seq_378223_x1   ......................................................................ucaccggguAuacaucagcua....................	1
seq_378198_x1   ......................................................................ucaccggguguacaucagGua....................	1
seq_374137_x18  ......................................................................ucaccgggAguacaucagcua....................	1
seq_378149_x1   ......................................................................uAaccggguguacaucagcua....................	1
seq_328388_x1017......................................................................ucaccggguguacaucagcua....................	0
seq_377771_x1   ......................................................................ucaccggguguCcaucagcua....................	1
seq_372264_x30  ......................................................................ucacAggguguacaucagcua....................	1
seq_377922_x1   ......................................................................ucaAcggguguacaucagcua....................	1
seq_376558_x5   ......................................................................ucaccggguguacaucagcuU....................	1
seq_376843_x4   ......................................................................ucaccggguguacaucagAua....................	1
seq_376239_x7   ......................................................................ucaccggguguaNaucagcua....................	1
seq_378048_x1   ......................................................................ucaccggAuguacaucagcua....................	1
seq_378097_x1   ......................................................................Ccaccggguguacaucagcua....................	1
seq_377864_x1   ......................................................................ucaccggguguacUucagcua....................	1
seq_378235_x1   ......................................................................ucaccAgguguacaucagcua....................	1
seq_376467_x6   ......................................................................ucaccggguguacaucaUcua....................	1
seq_377501_x2   ......................................................................ucaccggguguacaucaAcua....................	1
seq_378310_x1   ......................................................................ucaccggguguacaucagcuG....................	1
seq_376967_x4   ......................................................................ucaccggguguacaucCgcua....................	1
seq_378279_x1   ......................................................................ucaGcggguguacaucagcua....................	1
seq_377337_x2   ......................................................................uUaccggguguacaucagcua....................	1
seq_375319_x11  ......................................................................ucaccgggGguacaucagcua....................	1
seq_378227_x1   ......................................................................Ncaccggguguacaucagcua....................	1
seq_378166_x1   ......................................................................ucaccggguguacaucagcCa....................	1
seq_377262_x3   ......................................................................ucaccgCguguacaucagcua....................	1
seq_377043_x3   ......................................................................ucaccggguguacaucagUua....................	1
seq_378148_x1   ......................................................................ucaccggguguacGucagcua....................	1
seq_376883_x4   ......................................................................ucaccggguguacauAagcua....................	1
seq_377244_x3   ......................................................................ucaccggguguaAaucagcua....................	1
seq_377139_x3   ......................................................................ucacUggguguacaucagcua....................	1
seq_378225_x1   ......................................................................ucaNcggguguacaucagcua....................	1
seq_376919_x4   ......................................................................ucaccUgguguacaucagcua....................	1
seq_377223_x3   ......................................................................ucaccggCuguacaucagcua....................	1
seq_367890_x78  ......................................................................ucaccggguguaAaucagcuaa...................	1
seq_344961_x338 ......................................................................ucaccggguguacaucagcuaU...................	1
seq_370908_x40  ......................................................................ucaccggAuguacaucagcuaa...................	1
seq_372049_x31  ......................................................................ucaccAgguguacaucagcuaa...................	1
seq_375374_x11  ......................................................................ucaccggguguacGucagcuaa...................	1
seq_370360_x45  ......................................................................ucaccggguguacaucagcuUa...................	1
seq_371334_x37  ......................................................................ucaUcggguguacaucagcuaa...................	1
seq_376365_x6   ......................................................................ucaccggguguacauGagcuaa...................	1
seq_372964_x24  ......................................................................ucaccggguguacaucagcGaa...................	1
seq_374869_x13  ......................................................................ucaccggguguUcaucagcuaa...................	1
seq_375352_x11  ......................................................................ucaccggguguCcaucagcuaa...................	1
seq_355926_x199 ......................................................................ucaccggguguacaucaUcuaa...................	1
seq_352937_x224 ......................................................................ucaccgggCguacaucagcuaa...................	1
seq_377737_x2   ......................................................................ucNccggguguacaucagcuaa...................	1
seq_360066_x159 ......................................................................ucaccgggAguacaucagcuaa...................	1
seq_370622_x42  ......................................................................ucaccggguUuacaucagcuaa...................	1
seq_371585_x34  ......................................................................ucaccUgguguacaucagcuaa...................	1
seq_374241_x17  ......................................................................ucaGcggguguacaucagcuaa...................	1
seq_240442_x25577......................................................................ucaccggguguacaucagcuaa...................	0
seq_373527_x21  ......................................................................uNaccggguguacaucagcuaa...................	1
seq_342825_x384 ......................................................................ucacAggguguacaucagcuaa...................	1
seq_370080_x48  ......................................................................uAaccggguguacaucagcuaa...................	1
seq_378040_x1   ......................................................................ucaccgggNguacaucagcuaa...................	1
seq_369773_x52  ......................................................................ucaccggguguaUaucagcuaa...................	1
cel-miR-40      ......................................................................ucaccggguguacaucagcuaa...................	0
seq_374785_x14  ......................................................................ucCccggguguacaucagcuaa...................	1
seq_368871_x65  ......................................................................ucaAcggguguacaucagcuaa...................	1
seq_349713_x268 ......................................................................ucaccggguguaNaucagcuaa...................	1
seq_374841_x14  ......................................................................ucaccggguguacaucagcAaa...................	1
seq_371619_x34  ......................................................................ucacUggguguacaucagcuaa...................	1
seq_375585_x10  ......................................................................ucaccggguguacaucagGuaa...................	1
seq_370828_x40  ......................................................................ucaccggCuguacaucagcuaa...................	1
seq_372915_x25  ......................................................................ucaccggguguacCucagcuaa...................	1
seq_370449_x44  ......................................................................uUaccggguguacaucagcuaa...................	1
seq_372111_x31  ......................................................................ucaccggguCuacaucagcuaa...................	1
seq_372604_x27  ......................................................................uGaccggguguacaucagcuaa...................	1
seq_368331_x70  ......................................................................ucaccggguguacaucagAuaa...................	1
seq_376698_x5   ......................................................................ucaNcggguguacaucagcuaa...................	1
seq_375515_x10  ......................................................................ucaccggguguacaucagcCaa...................	1
seq_368401_x69  ......................................................................ucaccggguguacaucaCcuaa...................	1
seq_374487_x16  ......................................................................Gcaccggguguacaucagcuaa...................	1
seq_370222_x46  ......................................................................ucaccggguguacaucagNuaa...................	1
seq_374155_x18  ......................................................................ucaccggguAuacaucagcuaa...................	1
seq_374999_x13  ......................................................................ucaccCgguguacaucagcuaa...................	1
seq_373648_x20  ......................................................................Ccaccggguguacaucagcuaa...................	1
seq_366797_x89  ......................................................................ucaccggguguacaucagcuaC...................	1
seq_375363_x11  ......................................................................ucaccggguguGcaucagcuaa...................	1
seq_371145_x39  ......................................................................ucaccggguguacaucagcuGa...................	1
seq_347479_x287 ......................................................................ucaccgggGguacaucagcuaa...................	1
seq_376713_x5   ......................................................................ucUccggguguacaucagcuaa...................	1
seq_375966_x8   ......................................................................ucGccggguguacaucagcuaa...................	1
seq_375038_x13  ......................................................................Acaccggguguacaucagcuaa...................	1
seq_351287_x247 ......................................................................ucaccgggugGacaucagcuaa...................	1
seq_371953_x32  ......................................................................ucaccgAguguacaucagcuaa...................	1
seq_377058_x3   ......................................................................Ncaccggguguacaucagcuaa...................	1
seq_370314_x46  ......................................................................ucaccggguguacaucGgcuaa...................	1
seq_375665_x10  ......................................................................ucaccggguguacaCcagcuaa...................	1
seq_375865_x9   ......................................................................ucaccggNuguacaucagcuaa...................	1
seq_367573_x83  ......................................................................ucaccggguguacaucagcuCa...................	1
seq_364353_x115 ......................................................................ucaccgCguguacaucagcuaa...................	1
seq_369249_x61  ......................................................................ucaccggguguaGaucagcuaa...................	1
seq_369877_x52  ......................................................................ucaccggguguacaucUgcuaa...................	1
seq_369720_x53  ......................................................................ucaccggguguacaucaAcuaa...................	1
seq_374101_x18  ......................................................................ucaccggUuguacaucagcuaa...................	1
seq_367406_x84  ......................................................................ucaccggguguacaucCgcuaa...................	1
seq_369490_x59  ......................................................................ucaccgggugAacaucagcuaa...................	1
seq_375703_x9   ......................................................................ucaccggguguacaucagcuaG...................	1
seq_376134_x7   ......................................................................ucaccggguguacaAcagcuaa...................	1
seq_368118_x72  ......................................................................ucaccggguguacaucagUuaa...................	1
seq_348903_x271 ......................................................................ucaccgggugCacaucagcuaa...................	1
seq_377617_x2   ......................................................................ucacGggguguacaucagcuaa...................	1
seq_364804_x110 ......................................................................ucaccggguguacauAagcuaa...................	1
seq_366707_x90  ......................................................................ucaccggguguacauUagcuaa...................	1
seq_373899_x19  ......................................................................ucaccgUguguacaucagcuaa...................	1
seq_370175_x47  ......................................................................ucaccggguguacaucNgcuaa...................	1
seq_372711_x26  ......................................................................ucaccggguguacaGcagcuaa...................	1
seq_369549_x59  ......................................................................ucaccggguguacUucagcuaa...................	1
seq_343569_x355 ......................................................................ucaccggguguacaucagcuaaU..................	1
seq_372440_x28  ......................................................................ucaccggguguacaucagcuaaC..................	1
seq_374029_x18  ......................................................................ucaccggguguacaucagcuaag..................	0
seq_378259_x1   ......................................................................ucaccgggAguacaucagcuaag..................	1
seq_339613_x541 ......................................................................ucaccggguguacaucagcuaaA..................	1
seq_377595_x2   ......................................................................ucaccggguguacaucagcuaagU.................	1
seq_377749_x1   ......................................................................ucaccggguguacaucagcuaagC.................	1
seq_378291_x1   ......................................................................ucaccggguguacaucagcuaagg.................	0
seq_378129_x1   ......................................................................ucaccggguguacaucagcuaaAg.................	1
seq_378039_x1   ......................................................................ucaccggguguacaucagcuaaggC................	1
seq_376232_x7   .......................................................................caccggguguacaucagcua....................	0
seq_377964_x1   .......................................................................caccggguguacNucagcuaa...................	1
seq_377241_x3   .......................................................................caccggguguaGaucagcuaa...................	1
seq_377764_x1   .......................................................................Uaccggguguacaucagcuaa...................	1
seq_377933_x1   .......................................................................caccUgguguacaucagcuaa...................	1
seq_377635_x2   .......................................................................caccgggugAacaucagcuaa...................	1
seq_368044_x74  .......................................................................caccggguguacaucagcuaa...................	0
seq_377455_x2   .......................................................................caccgggGguacaucagcuaa...................	1
seq_378316_x1   .......................................................................caccggguguacaucaCcuaa...................	1
seq_377467_x2   .......................................................................caccggguguacaucagcuaag..................	0
seq_374065_x18  .......................................................................caccggguguacaucagcuaaU..................	1
seq_377535_x2   .......................................................................caccggguguacaucagcuaaC..................	1
seq_373747_x19  .......................................................................caccggguguacaucagcuaaA..................	1
seq_377585_x2   ........................................................................accggguguacaucagcu.....................	0
seq_376955_x4   ........................................................................accggguguacaucagcua....................	0
seq_378020_x1   ........................................................................accgggugCacaucagcuaa...................	1
seq_378224_x1   ........................................................................acAggguguacaucagcuaa...................	1
seq_377860_x1   ........................................................................accggguguaUaucagcuaa...................	1
seq_377220_x3   ........................................................................accggguguacaucagGuaa...................	1
seq_377745_x1   ........................................................................Uccggguguacaucagcuaa...................	1
seq_377887_x1   ........................................................................accgUguguacaucagcuaa...................	1
seq_378139_x1   ........................................................................accggguguacaucagcCaa...................	1
seq_378244_x1   ........................................................................accgCguguacaucagcuaa...................	1
seq_377939_x1   ........................................................................accggguAuacaucagcuaa...................	1
seq_377569_x2   ........................................................................accggguguacaucUgcuaa...................	1
seq_375275_x11  ........................................................................accgggCguacaucagcuaa...................	1
seq_378306_x1   ........................................................................acGggguguacaucagcuaa...................	1
seq_377280_x3   ........................................................................accggguguacauAagcuaa...................	1
seq_351776_x240 ........................................................................accggguguacaucagcuaa...................	0
seq_378004_x1   ........................................................................accggguguacaucaUcuaa...................	1
seq_378267_x1   ........................................................................accggguguacaucagcuaC...................	1
seq_377157_x3   ........................................................................accggguguacaucagAuaa...................	1
seq_376633_x5   ........................................................................accggguguacaucCgcuaa...................	1
seq_376767_x4   ........................................................................accCgguguacaucagcuaa...................	1
seq_378206_x1   ........................................................................accggguguacaGcagcuaa...................	1
seq_377499_x2   ........................................................................accggguguacaucaCcuaa...................	1
seq_377607_x2   ........................................................................accggguguacaucagcuCa...................	1
seq_377469_x2   ........................................................................aGcggguguacaucagcuaa...................	1
seq_377623_x2   ........................................................................accggguguacaucagcuaU...................	1
seq_376503_x6   ........................................................................accgggugGacaucagcuaa...................	1
seq_377579_x2   ........................................................................accgggAguacaucagcuaa...................	1
seq_377347_x2   ........................................................................aAcggguguacaucagcuaa...................	1
seq_377905_x1   ........................................................................Nccggguguacaucagcuaa...................	1
seq_376618_x5   ........................................................................accgggGguacaucagcuaa...................	1
seq_377367_x2   ........................................................................accggguguacCucagcuaa...................	1
seq_377310_x3   ........................................................................accggguguacaNcagcuaa...................	1
seq_376759_x4   ........................................................................accggguguacaucagcuaaA..................	1
seq_377869_x1   ........................................................................accggguguacaucagcuaaU..................	1
seq_378311_x1   .........................................................................ccggguguacaucagcua....................	0
seq_378258_x1   .........................................................................cAggguguacaucagcuaa...................	1
seq_377659_x2   .........................................................................ccggguguacaucagcuaa...................	0



>chrII:11534525-11540624_9
score total		        7482.8
score for star read(s)	           3.9
score for read counts	        7472.1
score for mfe		           2.2
score for randfold	           1.6
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	         14668
mature read count	         14617
loop read count		             0
star read count		            51
exp             fffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMfffffffffffffffffff
obs             fffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMfffffffffffffffffff
pri_seq         ccacuugcuccaccgcugucggggaaccgcgccaauuuucgcuucagugcuagaccauccaaagugucuaucaccgggugaaaauucgcauggguccccgacgcggaaaga
pri_struct      ............((((.((((((((.(((.((.(((((((((((..(((.((((((.......).))))).))).))))))))))).)).))).)))))))))))).....	#MM
seq_377936_x1   .............................cgccaauuuucgcuucagCgc.............................................................	1
seq_377645_x2   .............................cgccaauuuucgcuucagugcu............................................................	0
seq_377966_x1   .............................cgccaauuuucgcuucaguUcu............................................................	1
seq_378302_x1   .............................cgAcaauuuucgcuucagugcua...........................................................	1
seq_371297_x37  .............................cgccaauuuucgcuucagugcua...........................................................	0
seq_378170_x1   .............................cgccaauuuucgcuucagCgcua...........................................................	1
seq_378042_x1   .............................cgccaauuuucgcuucagGgcua...........................................................	1
seq_377163_x3   .............................cgccaauuuucgcuucaUugcua...........................................................	1
seq_377387_x2   .............................cgccaauuuucgcuucagugcuaU..........................................................	1
seq_378257_x1   ..............................gccaauuuucgcuucaAugcua...........................................................	1
seq_378254_x1   ..............................gccaCuuuucgcuucagugcua...........................................................	1
seq_378197_x1   ...................................................................cuaucaccgggCgaaaauucgca.....................	1
seq_373804_x19  ....................................................................Aaucaccgggugaaaauucgcaug...................	1
seq_378229_x1   ....................................................................uCucaccgggugaaaauucgcaug...................	1
seq_378144_x1   .....................................................................aucaAcgggugaaaauucgcaug...................	1
seq_375076_x12  .....................................................................aucaccgggugaaaauucgcaug...................	0
seq_375525_x10  .....................................................................Cucaccgggugaaaauucgcaug...................	1
seq_378009_x1   .....................................................................Uucaccgggugaaaauucgcaug...................	1
seq_377761_x1   ......................................................................ucaccgggugaaaauucgc......................	0
seq_377369_x2   ......................................................................ucacAgggugaaaauucgca.....................	1
seq_377937_x1   ......................................................................ucaccgggugaaaauuAgca.....................	1
seq_372815_x25  ......................................................................ucaccgggugaaaauucgca.....................	0
seq_378192_x1   ......................................................................ucaccgggCgaaaauucgca.....................	1
seq_378019_x1   ......................................................................ucaccgggugUaaauucgca.....................	1
seq_377785_x1   ......................................................................ucaccgggugaUaauucgca.....................	1
seq_377409_x2   ......................................................................ucaccgggGgaaaauucgca.....................	1
seq_377790_x1   ......................................................................ucaccgggugaaaauucgUa.....................	1
seq_378098_x1   ......................................................................ucaccgggugaaaauucUcau....................	1
seq_377907_x1   ......................................................................ucaccgggugaaaauucgcCu....................	1
seq_352482_x229 ......................................................................ucaccgggugaaaauucgcau....................	0
seq_377756_x1   ......................................................................ucaccgUgugaaaauucgcau....................	1
seq_376515_x6   ......................................................................ucacAgggugaaaauucgcau....................	1
seq_377952_x1   ......................................................................ucaccgggugUaaauucgcau....................	1
seq_377985_x1   ......................................................................ucacUgggugaaaauucgcau....................	1
seq_377691_x2   ......................................................................ucaccggguUaaaauucgcau....................	1
seq_377934_x1   ......................................................................ucaccgggugaaaauucAcau....................	1
seq_377124_x3   ......................................................................ucaccgggGgaaaauucgcau....................	1
seq_378069_x1   ......................................................................uGaccgggugaaaauucgcau....................	1
seq_378028_x1   ......................................................................ucaccgCgugaaaauucgcau....................	1
seq_376323_x6   ......................................................................ucaccgggugaaaauuAgcau....................	1
seq_378269_x1   ......................................................................ucaccgggugaaGauucgcau....................	1
seq_377993_x1   ......................................................................ucaccgggugaaaauucgcaG....................	1
seq_378033_x1   ......................................................................ucaAcgggugaaaauucgcau....................	1
seq_378271_x1   ......................................................................uAaccgggugaaaauucgcau....................	1
seq_377121_x3   ......................................................................ucaccgggugaaNauucgcau....................	1
seq_377497_x2   ......................................................................ucaccgggugaaaauuGgcau....................	1
seq_373728_x19  ......................................................................ucaccgggugaCaauucgcaug...................	1
seq_360225_x157 ......................................................................ucaccgggCgaaaauucgcaug...................	1
seq_373268_x22  ......................................................................ucaccgggugaaaauucgcauC...................	1
seq_377271_x3   ......................................................................ucaccgggugaaaauucgGaug...................	1
seq_374343_x16  ......................................................................Gcaccgggugaaaauucgcaug...................	1
seq_373506_x21  ......................................................................ucaccAggugaaaauucgcaug...................	1
seq_372204_x30  ......................................................................ucaccgggugaaCauucgcaug...................	1
seq_347181_x298 ......................................................................ucacAgggugaaaauucgcaug...................	1
seq_361731_x143 ......................................................................ucaccgggAgaaaauucgcaug...................	1
seq_375874_x9   ......................................................................ucaccgggugaaaauucgcaCg...................	1
seq_378088_x1   ......................................................................ucaccgggugaaaauucNcaug...................	1
seq_373588_x20  ......................................................................ucaccgggugaaaauucgcUug...................	1
seq_377851_x1   ......................................................................Ncaccgggugaaaauucgcaug...................	1
seq_373548_x20  ......................................................................ucaccggCugaaaauucgcaug...................	1
seq_370128_x47  ......................................................................ucaccgggugCaaauucgcaug...................	1
seq_374119_x18  ......................................................................ucaccgggugaaaauucgUaug...................	1
seq_373060_x24  ......................................................................ucaccgAgugaaaauucgcaug...................	1
seq_373443_x21  ......................................................................ucaGcgggugaaaauucgcaug...................	1
seq_374627_x15  ......................................................................ucaccggguAaaaauucgcaug...................	1
seq_374973_x13  ......................................................................ucaccgggugaUaauucgcaug...................	1
seq_373400_x22  ......................................................................ucaccgggugaaaauucgcCug...................	1
seq_372577_x27  ......................................................................ucaccgggugaaaauucAcaug...................	1
seq_375505_x10  ......................................................................uNaccgggugaaaauucgcaug...................	1
seq_368739_x66  ......................................................................ucaccgggugaaaauucUcaug...................	1
seq_376703_x5   ......................................................................ucaccgggugaaUauucgcaug...................	1
seq_345948_x316 ......................................................................ucaccgggugaaaauucgcauU...................	1
seq_373290_x22  ......................................................................ucaccgggugaaaauuNgcaug...................	1
seq_376062_x8   ......................................................................ucacGgggugaaaauucgcaug...................	1
seq_376353_x6   ......................................................................ucGccgggugaaaauucgcaug...................	1
seq_371653_x34  ......................................................................ucaccgggugaaaauucgcauA...................	1
seq_375748_x9   ......................................................................Ccaccgggugaaaauucgcaug...................	1
seq_373628_x20  ......................................................................ucaccUggugaaaauucgcaug...................	1
seq_377581_x2   ......................................................................ucaccgggugaaaGuucgcaug...................	1
seq_351036_x251 ......................................................................ucaccgggGgaaaauucgcaug...................	1
seq_376110_x8   ......................................................................ucaccgggugaaaauGcgcaug...................	1
seq_376218_x7   ......................................................................Acaccgggugaaaauucgcaug...................	1
seq_377357_x2   ......................................................................ucaNcgggugaaaauucgcaug...................	1
seq_375136_x12  ......................................................................ucaccgggugaaaauCcgcaug...................	1
seq_366148_x95  ......................................................................ucaccgggugaaaauuAgcaug...................	1
seq_374895_x13  ......................................................................ucaccgggugaaaauucCcaug...................	1
seq_374701_x14  ......................................................................ucaccgggugaaaauuGgcaug...................	1
seq_375475_x10  ......................................................................ucCccgggugaaaauucgcaug...................	1
seq_371985_x32  ......................................................................ucaccgggugGaaauucgcaug...................	1
seq_372353_x29  ......................................................................uUaccgggugaaaauucgcaug...................	1
seq_368673_x66  ......................................................................ucaccgCgugaaaauucgcaug...................	1
seq_372382_x29  ......................................................................ucacUgggugaaaauucgcaug...................	1
seq_373785_x19  ......................................................................ucaccggAugaaaauucgcaug...................	1
seq_266019_x11571......................................................................ucaccgggugaaaauucgcaug...................	0
seq_372234_x30  ......................................................................ucaccgggugaaaauuUgcaug...................	1
seq_373842_x19  ......................................................................ucaccgggugaaaauucgAaug...................	1
seq_375655_x10  ......................................................................ucaccgggugaaaCuucgcaug...................	1
seq_375998_x8   ......................................................................ucaccgggugaaaauucgcGug...................	1
seq_376281_x6   ......................................................................ucaccgggugaaaauucgcaAg...................	1
seq_375208_x12  ......................................................................ucaccggguCaaaauucgcaug...................	1
seq_376141_x7   ......................................................................ucaccgggugaaaauAcgcaug...................	1
seq_375645_x10  ......................................................................ucaccCggugaaaauucgcaug...................	1
seq_372865_x25  ......................................................................ucaccgggugUaaauucgcaug...................	1
seq_367656_x78  ......................................................................ucaccgggugaaNauucgcaug...................	1
seq_375064_x12  ......................................................................ucaccgggugaGaauucgcaug...................	1
seq_375605_x10  ......................................................................ucaccgggugaaaaGucgcaug...................	1
seq_374391_x16  ......................................................................ucaUcgggugaaaauucgcaug...................	1
seq_378049_x1   ......................................................................ucaccggNugaaaauucgcaug...................	1
seq_375297_x11  ......................................................................ucaccgggugaaaaCucgcaug...................	1
seq_375425_x10  ......................................................................ucaccgggugaaaaAucgcaug...................	1
seq_372685_x26  ......................................................................uAaccgggugaaaauucgcaug...................	1
seq_369431_x59  ......................................................................ucaAcgggugaaaauucgcaug...................	1
seq_375051_x13  ......................................................................ucaccggguUaaaauucgcaug...................	1
seq_375495_x10  ......................................................................ucaccggUugaaaauucgcaug...................	1
seq_374551_x16  ......................................................................ucaccgggugaaGauucgcaug...................	1
seq_374687_x14  ......................................................................uGaccgggugaaaauucgcaug...................	1
seq_377349_x2   ......................................................................ucaccgggNgaaaauucgcaug...................	1
seq_374799_x14  ......................................................................ucaccgggugaaaauucgNaug...................	1
seq_371444_x36  ......................................................................ucaccgggugaaaauucgcaGg...................	1
seq_375712_x9   ......................................................................ucaccgUgugaaaauucgcaug...................	1
cel-miR-36      ......................................................................ucaccgggugaaaauucgcaug...................	0
seq_374258_x17  ......................................................................ucaccgggugaaaUuucgcaug...................	1
seq_378058_x1   ......................................................................ucaccgggugaaaauucgcaGgg..................	1
seq_375635_x10  ......................................................................ucaccgggugaaaauucgcaugA..................	1
seq_377329_x2   ......................................................................ucaccgggugaaaauucgcaugC..................	1
seq_371408_x36  ......................................................................ucaccgggugaaaauucgcaugU..................	1
seq_378065_x1   ......................................................................ucaccgggugaaaauucgcauggC.................	1
seq_377890_x1   .......................................................................caccgggugaaaCuucgcaug...................	1
seq_377471_x2   .......................................................................caccgggGgaaaauucgcaug...................	1
seq_377827_x1   .......................................................................cacUgggugaaaauucgcaug...................	1
seq_377073_x3   .......................................................................caccgggugaaaauucgcaug...................	0
seq_378145_x1   ........................................................................accgggugaaaauucgca.....................	0
seq_377103_x3   ........................................................................accgggugaaaauucgcau....................	0
seq_378119_x1   ........................................................................accgggugaaaauucgcaCg...................	1
seq_378255_x1   ........................................................................accggAugaaaauucgcaug...................	1
seq_377693_x2   ........................................................................accgggugaaaauucUcaug...................	1
seq_377743_x2   ........................................................................accCggugaaaauucgcaug...................	1
seq_378045_x1   ........................................................................accgggugaaaaAucgcaug...................	1
seq_377351_x2   ........................................................................accggguCaaaauucgcaug...................	1
seq_377791_x1   ........................................................................accgggugaaaauucgcauC...................	1
seq_378159_x1   ........................................................................acUgggugaaaauucgcaug...................	1
seq_365235_x104 ........................................................................accgggugaaaauucgcaug...................	0
seq_377765_x1   ........................................................................accgggugaaaauucCcaug...................	1
seq_377365_x2   ........................................................................accgggugaaaauuAgcaug...................	1
seq_378121_x1   ........................................................................accgggCgaaaauucgcaug...................	1
seq_377641_x2   ........................................................................accgggugaaaauGcgcaug...................	1
seq_378264_x1   ........................................................................accgAgugaaaauucgcaug...................	1
seq_378094_x1   ........................................................................accgggAgaaaauucgcaug...................	1
seq_377669_x2   ........................................................................accgggugaaaauucgcauU...................	1
seq_376819_x4   ........................................................................accgggGgaaaauucgcaug...................	1
seq_377755_x1   ..........................................................................cgggugaaaauucgcaug...................	0



>chrII:11534525-11540624_15
score total		        1978.6
score for star read(s)	           3.9
score for read counts	        1968.1
score for mfe		             2
score for randfold	           1.6
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	          3872
mature read count	          3014
loop read count		             1
star read count		           857
exp             ffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMffffffffffffffffff
obs             ffffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSllllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMffffffffffffffffff
pri_seq         auuauugaauuccugauauaccgagagcccagcugauuucgucuugguaauaagcucgucauugagauuaucaccggguguaaaucagcuuggcucuggugucuccgaac
pri_struct      .........(((..((.(((((.((((((.(((((((((((.((((((.((((.((((....)))).)))).)))))))).))))))))).))))))))))).)).))).	#MM
seq_377766_x1   .............................cagcugauuucgucuugguaau...........................................................	0
seq_377852_x1   .............................Aagcugauuucgucuugguaau...........................................................	1
seq_376455_x6   .............................cagcugauuucgucuugguaaua..........................................................	0
seq_376102_x8   ..............................agcugauuucgucuuggua.............................................................	0
seq_377932_x1   ..............................agcugCuuucgucuugguaa............................................................	1
seq_377781_x1   ..............................agcugauuucgucuugUuaa............................................................	1
seq_377876_x1   ..............................agcugUuuucgucuugguaa............................................................	1
seq_374292_x17  ..............................agcugauuucgucuugguaa............................................................	0
seq_377750_x1   ..............................agcugauuucgucuugguCa............................................................	1
seq_377792_x1   ..............................agAugauuucgucuugguaau...........................................................	1
seq_377145_x3   ..............................Ugcugauuucgucuugguaau...........................................................	1
seq_370030_x50  ..............................agcugauuucgucuugguaau...........................................................	0
seq_378023_x1   ..............................agcugauuucgucuugguUau...........................................................	1
seq_377863_x1   ..............................agcugauuAcgucuugguaau...........................................................	1
seq_377940_x1   ..............................agcugauuucgucuugAuaau...........................................................	1
seq_377894_x1   ..............................agcugauuucguAuugguaau...........................................................	1
seq_377493_x2   ..............................aCcugauuucgucuugguaaua..........................................................	1
seq_377061_x3   ..............................agcugauuucgucuuggAaaua..........................................................	1
seq_377856_x1   ..............................agcugauuucgCcuugguaaua..........................................................	1
seq_378117_x1   ..............................agcugauuucgAcuugguaaua..........................................................	1
seq_376371_x6   ..............................agcugauuucgucuuUguaaua..........................................................	1
seq_377070_x3   ..............................agcugauuuAgucuugguaaua..........................................................	1
seq_375950_x8   ..............................agAugauuucgucuugguaaua..........................................................	1
seq_376148_x7   ..............................agcugUuuucgucuugguaaua..........................................................	1
seq_376533_x5   ..............................Ugcugauuucgucuugguaaua..........................................................	1
seq_377313_x3   ..............................agcugauuuUgucuugguaaua..........................................................	1
seq_378077_x1   ..............................agcugaCuucgucuugguaaua..........................................................	1
seq_378084_x1   ..............................aAcugauuucgucuugguaaua..........................................................	1
seq_377902_x1   ..............................agcugauuucguGuugguaaua..........................................................	1
seq_377151_x3   ..............................agcuAauuucgucuugguaaua..........................................................	1
seq_378275_x1   ..............................agcCgauuucgucuugguaaua..........................................................	1
seq_378290_x1   ..............................agcugauuucgucuugguaGua..........................................................	1
seq_377663_x2   ..............................agcugGuuucgucuugguaaua..........................................................	1
seq_377166_x3   ..............................agcugauuucgucuugguaUua..........................................................	1
seq_378017_x1   ..............................agcugCuuucgucuugguaaua..........................................................	1
seq_376979_x4   ..............................agUugauuucgucuugguaaua..........................................................	1
seq_376907_x4   ..............................agcugauuucgucuugguaauU..........................................................	1
seq_377363_x2   ..............................agcugaGuucgucuugguaaua..........................................................	1
seq_377031_x3   ..............................agcugauuucgucuugguaauC..........................................................	1
seq_377525_x2   ..............................agcugauuucguAuugguaaua..........................................................	1
seq_377085_x3   ..............................agcugauuucgGcuugguaaua..........................................................	1
seq_376739_x4   ..............................agcugauuucgucuuggCaaua..........................................................	1
seq_377274_x3   ..............................agcugauuucguUuugguaaua..........................................................	1
seq_377389_x2   ..............................agcugauuucgucuuCguaaua..........................................................	1
seq_376578_x5   ..............................agcugauuucgucuuggGaaua..........................................................	1
seq_377665_x2   ..............................agcugauuucgucuugguCaua..........................................................	1
seq_378137_x1   ..............................agcugauuucAucuugguaaua..........................................................	1
seq_337222_x632 ..............................agcugauuucgucuugguaaua..........................................................	0
seq_377205_x3   ..............................agcugauuucgucuugCuaaua..........................................................	1
seq_378202_x1   ..............................agcugauuucUucuugguaaua..........................................................	1
seq_375455_x10  ..............................agcugauuucgucuugUuaaua..........................................................	1
seq_373956_x19  ..............................agcugauuucgucuugguaauaU.........................................................	1
seq_376317_x6   ..............................agcugauuucgucuugguaauaa.........................................................	0
seq_377935_x1   ..............................agcugauuucguGuugguaauaa.........................................................	1
seq_377919_x1   ..............................agcuAauuucgucuugguaauaa.........................................................	1
seq_378228_x1   ..............................agcugauuucgucuugguaauaC.........................................................	1
seq_378031_x1   ....................................................agcucgucauugagauua........................................	0
seq_377831_x1   ....................................................................uGucaccggguguaaaucagcu....................	1
seq_377319_x3   ....................................................................Aaucaccggguguaaaucagcuug..................	1
seq_377509_x2   .....................................................................Cucaccggguguaaaucagcuu...................	1
seq_378082_x1   .....................................................................Cucaccggguguaaaucagcuug..................	1
seq_377100_x3   .....................................................................aucaccggguguaaaucagcuug..................	0
seq_376693_x5   ......................................................................ucaccggguguaaaucag......................	0
seq_377359_x2   ......................................................................ucaccgggGguaaaucagc.....................	1
seq_375286_x11  ......................................................................ucaccggguguaaaucagc.....................	0
seq_377929_x1   ......................................................................ucaccggguguaaauAagc.....................	1
seq_378332_x1   ......................................................................ucaccggguguaaaucaUc.....................	1
seq_378328_x1   ......................................................................ucaGcggguguaaaucagc.....................	1
seq_377979_x1   ......................................................................ucaccggguguaNaucagc.....................	1
seq_377361_x2   ......................................................................ucacAggguguaaaucagcu....................	1
seq_373312_x22  ......................................................................ucaccggguguaaaucagcu....................	0
seq_378183_x1   ......................................................................ucaccggguguaNaucagcu....................	1
seq_378120_x1   ......................................................................ucaccggguguaaaucagcG....................	1
seq_377981_x1   ......................................................................ucaccggguguaUaucagcu....................	1
seq_378256_x1   ......................................................................ucaccggguguaaaucaAcu....................	1
seq_377995_x1   ......................................................................Gcaccggguguaaaucagcuu...................	1
seq_378260_x1   ......................................................................ucaccggguguaaauUagcuu...................	1
seq_378301_x1   ......................................................................ucaccgggCguaaaucagcuu...................	1
seq_378061_x1   ......................................................................uGaccggguguaaaucagcuu...................	1
seq_377812_x1   ......................................................................ucaccggguguaaaAcagcuu...................	1
seq_377776_x1   ......................................................................ucaccgCguguaaaucagcuu...................	1
seq_377244_x3   ......................................................................ucaccggguguaaaucagcuA...................	1
seq_366974_x88  ......................................................................ucaccggguguaaaucagcuu...................	0
seq_377841_x1   ......................................................................ucaccgggugCaaaucagcuu...................	1
seq_378297_x1   ......................................................................ucaccgggAguaaaucagcuu...................	1
seq_377914_x1   ......................................................................ucaccggguguaaaucagcCu...................	1
seq_376558_x5   ......................................................................ucaccggguguaCaucagcuu...................	1
seq_377989_x1   ......................................................................ucaccggguguaaaCcagcuu...................	1
seq_376743_x4   ......................................................................ucacAggguguaaaucagcuu...................	1
seq_377778_x1   ......................................................................ucaccggguguaaaucGgcuu...................	1
seq_377753_x1   ......................................................................ucaccggguguaaaucaUcuu...................	1
seq_376648_x5   ......................................................................ucaccggguguaaaucGgcuug..................	1
seq_377707_x2   ......................................................................ucaccggguguaGaucagcuug..................	1
seq_377978_x1   ......................................................................ucaccCgguguaaaucagcuug..................	1
cel-miR-39      ......................................................................ucaccggguguaaaucagcuug..................	0
seq_378262_x1   ......................................................................ucaccggguguaUaucagcuug..................	1
seq_376628_x5   ......................................................................ucaccggguguaaaucagAuug..................	1
seq_377259_x3   ......................................................................ucaccggguguaaaucUgcuug..................	1
seq_377503_x2   ......................................................................ucaccggguAuaaaucagcuug..................	1
seq_374309_x17  ......................................................................ucaccgggCguaaaucagcuug..................	1
seq_377495_x2   ......................................................................ucaccggguguCaaucagcuug..................	1
seq_376118_x8   ......................................................................ucaccggguguaaaucaCcuug..................	1
seq_374326_x17  ......................................................................ucaccggguguaaauUagcuug..................	1
seq_376771_x4   ......................................................................ucaUcggguguaaaucagcuug..................	1
seq_376509_x6   ......................................................................ucaccggUuguaaaucagcuug..................	1
seq_377631_x2   ......................................................................ucCccggguguaaaucagcuug..................	1
seq_374642_x15  ......................................................................ucaccggguguaaauAagcuug..................	1
seq_377433_x2   ......................................................................uGaccggguguaaaucagcuug..................	1
seq_373880_x19  ......................................................................ucaccgggAguaaaucagcuug..................	1
seq_375942_x8   ......................................................................ucaccgCguguaaaucagcuug..................	1
seq_374855_x14  ......................................................................ucaccgggugGaaaucagcuug..................	1
seq_377094_x3   ......................................................................uNaccggguguaaaucagcuug..................	1
seq_373766_x19  ......................................................................ucaccgggugCaaaucagcuug..................	1
seq_378234_x1   ......................................................................ucaccggguUuaaaucagcuug..................	1
seq_376437_x6   ......................................................................ucaccggguguaaaucagcuGg..................	1
seq_376995_x4   ......................................................................ucaccgAguguaaaucagcuug..................	1
seq_377591_x2   ......................................................................ucaccggguCuaaaucagcuug..................	1
seq_377217_x3   ......................................................................ucaccgggugAaaaucagcuug..................	1
seq_377395_x2   ......................................................................ucaccggguguGaaucagcuug..................	1
seq_377545_x2   ......................................................................ucaccggguguaaaucNgcuug..................	1
seq_376899_x4   ......................................................................ucaccggguguaaaCcagcuug..................	1
seq_378172_x1   ......................................................................ucaccggNuguaaaucagcuug..................	1
seq_354255_x214 ......................................................................ucaccggguguaaaucagcuuU..................	1
seq_377808_x1   ......................................................................ucaccggguguaaaucagGuug..................	1
seq_376311_x6   ......................................................................ucaccggguguaCaucagcuug..................	1
seq_377741_x2   ......................................................................ucaccggguguaaaucagUuug..................	1
seq_375445_x10  ......................................................................ucaccggguguaNaucagcuug..................	1
seq_378186_x1   ......................................................................ucaNcggguguaaaucagcuug..................	1
seq_377920_x1   ......................................................................ucaccggguguaaaucagcuAg..................	1
seq_375918_x8   ......................................................................uUaccggguguaaaucagcuug..................	1
seq_375555_x10  ......................................................................ucaccggguguaaaucaUcuug..................	1
seq_377345_x2   ......................................................................ucaccggguguaaCucagcuug..................	1
seq_376548_x5   ......................................................................ucaccggguguaaaGcagcuug..................	1
seq_374597_x15  ......................................................................ucaccggguguaaaucagcuuC..................	1
seq_376891_x4   ......................................................................ucaccggguguaaaucagcGug..................	1
seq_311369_x2128......................................................................ucaccggguguaaaucagcuug..................	0
seq_378047_x1   ......................................................................ucaccggguguaaauGagcuug..................	1
seq_375757_x9   ......................................................................ucaccggguguaaaucCgcuug..................	1
seq_376377_x6   ......................................................................ucaccUgguguaaaucagcuug..................	1
seq_376779_x4   ......................................................................ucaccAgguguaaaucagcuug..................	1
seq_377199_x3   ......................................................................ucaccgUguguaaaucagcuug..................	1
seq_376022_x8   ......................................................................ucaAcggguguaaaucagcuug..................	1
seq_372142_x31  ......................................................................ucacAggguguaaaucagcuug..................	1
seq_378127_x1   ......................................................................ucaccggguguaaaucagcCug..................	1
seq_377375_x2   ......................................................................ucaccggguguaaaucaAcuug..................	1
seq_377727_x2   ......................................................................ucaccggCuguaaaucagcuug..................	1
seq_378248_x1   ......................................................................uAaccggguguaaaucagcuug..................	1
seq_377573_x2   ......................................................................ucaGcggguguaaaucagcuug..................	1
seq_378181_x1   ......................................................................Acaccggguguaaaucagcuug..................	1
seq_376815_x4   ......................................................................ucaccggguguaaUucagcuug..................	1
seq_377238_x3   ......................................................................ucacUggguguaaaucagcuug..................	1
seq_375847_x9   ......................................................................Gcaccggguguaaaucagcuug..................	1
seq_377483_x2   ......................................................................ucaccggguguaaGucagcuug..................	1
seq_377697_x2   ......................................................................ucaccggAuguaaaucagcuug..................	1
seq_377880_x1   ......................................................................ucaccggguguUaaucagcuug..................	1
seq_372658_x27  ......................................................................ucaccgggGguaaaucagcuug..................	1
seq_371821_x33  ......................................................................ucaccggguguaaaucagcuuA..................	1
seq_377399_x2   ......................................................................ucaccggguguaaaucagcAug..................	1
seq_376991_x4   ......................................................................ucaccggguguaaaucagcuugC.................	1
seq_376683_x5   ......................................................................ucaccggguguaaaucagcuugg.................	0
seq_375196_x12  ......................................................................ucaccggguguaaaucagcuugA.................	1
seq_372080_x31  ......................................................................ucaccggguguaaaucagcuugU.................	1
seq_377849_x1   ......................................................................ucaccggguguaaaucagcuuggc................	0
seq_377884_x1   ......................................................................ucaccggguguaaaucagcuuggcG...............	1
seq_377597_x2   .......................................................................caccggguguaaaucagcuug..................	0
seq_377825_x1   .......................................................................caccggguguaaaucagcuuU..................	1
seq_377621_x2   ........................................................................accggguguaaaucagcuuU..................	1
seq_378024_x1   ........................................................................aAcggguguaaaucagcuug..................	1
seq_377846_x1   ........................................................................accgggGguaaaucagcuug..................	1
seq_378292_x1   ........................................................................accgggCguaaaucagcuug..................	1
seq_377705_x2   ........................................................................accggguguaaaucagcuuA..................	1
seq_377873_x1   ........................................................................accggguguaaaucUgcuug..................	1
seq_371887_x33  ........................................................................accggguguaaaucagcuug..................	0
seq_378179_x1   ........................................................................accggguguaaaucagcuNg..................	1
seq_378219_x1   ........................................................................accggguguaaaucagcuugUc................	1
seq_377870_x1   .........................................................................ccggguguaaaucagcuuA..................	1



>chrII:11534525-11540624_13
score total		           5.5
score for star read(s)	          -1.3
score for read counts	             0
score for mfe		           2.2
score for randfold	           1.6
score for cons. seed	             3
miRNA with same seed	    cbr-miR-35
total read count	          2140
mature read count	          2132
loop read count		             8
star read count		             0
exp             fffffffffffffffffffffffffffffSSSSSSSSSSSSSSSSSSSSSSlllllllllllllllllllMMMMMMMMMMMMMMMMMMMMMMfffffffffffffffffff
pri_seq         ucgugguuucucugugagccagguccuguuccgguuuuuuccguggugauaacgcauccaaaagucucuaucaccgggagaaaaacuggaguaggaccugugacucauucc
pri_struct      .............((((((((((((((((((((((((((..(.((((((((..((........))...)))))))).)..)))))))))))))))))))).).)))))...	#MM
seq_378012_x1   .........cucugugaUccagguccugu..................................................................................	1
seq_376030_x8   ...................................................acgcauccaaaagucucua.........................................	0
seq_377775_x1   .....................................................................aucaccgggagaaaaacuggag....................	0
seq_378130_x1   .....................................................................aucaccgggagUaaaacuggagu...................	1
seq_375088_x12  .....................................................................aucaccgggagaaaaacuggagu...................	0
seq_378001_x1   .....................................................................aucaccggCagaaaaacuggagu...................	1
seq_376947_x4   .....................................................................Cucaccgggagaaaaacuggagu...................	1
seq_378196_x1   .....................................................................aucaccgggagaaCaacuggagu...................	1
seq_377529_x2   .....................................................................aucaccgggagaaaaacuggaguU..................	1
seq_377895_x1   .....................................................................aucaccgggagaaaaacuggaguaA.................	1
seq_377879_x1   ......................................................................ucaccgggUgaaaaacug.......................	1
seq_377877_x1   ......................................................................ucaccgggagaaaaacug.......................	0
seq_376747_x4   ......................................................................ucaccgggagaaaaacugga.....................	0
seq_377819_x1   ......................................................................ucaccgggagaaaaacuggaU....................	1
seq_377523_x2   ......................................................................ucaccggCagaaaaacuggag....................	1
seq_377211_x3   ......................................................................ucaccgggagGaaaacuggag....................	1
seq_378171_x1   ......................................................................ucaccgggagaaUaacuggag....................	1
seq_377815_x1   ......................................................................ucaccgggagaaaUacuggag....................	1
seq_377425_x2   ......................................................................ucacAgggagaaaaacuggag....................	1
seq_378277_x1   ......................................................................ucaccgggagaaaaaUuggag....................	1
seq_378014_x1   ......................................................................ucaccgggagaaaaaGuggag....................	1
seq_376859_x4   ......................................................................ucaccgggagaaaaacuggUg....................	1
seq_377517_x2   ......................................................................ucaccgggagCaaaacuggag....................	1
seq_378305_x1   ......................................................................ucaAcgggagaaaaacuggag....................	1
seq_377924_x1   ......................................................................ucaccgggagUaaaacuggag....................	1
seq_377603_x2   ......................................................................ucaccgggagaaaaacuggaC....................	1
seq_378208_x1   ......................................................................ucaccgggagaaaaacAggag....................	1
seq_377178_x3   ......................................................................ucaccgggagaaaaacugCag....................	1
seq_377886_x1   ......................................................................ucaccgggagaaCaacuggag....................	1
seq_361587_x144 ......................................................................ucaccgggagaaaaacuggag....................	0
seq_377571_x2   ......................................................................ucaccgggUgaaaaacuggag....................	1
seq_376054_x8   ......................................................................ucaccgggagGaaaacuggagu...................	1
seq_377868_x1   ......................................................................ucaAcgggagaaaaacuggagu...................	1
seq_377229_x3   ......................................................................ucaccggAagaaaaacuggagu...................	1
seq_377551_x2   ......................................................................ucaccgggagaaNaacuggagu...................	1
seq_377429_x2   ......................................................................ucaccggCagaaaaacuggagu...................	1
seq_376678_x5   ......................................................................ucaccgggagaaaaacuCgagu...................	1
seq_377798_x1   ......................................................................ucaccgggagaaaaaNuggagu...................	1
seq_374083_x18  ......................................................................ucaccgggagaaaaacuggUgu...................	1
seq_375485_x10  ......................................................................ucaccgggagCaaaacuggagu...................	1
seq_377874_x1   ......................................................................ucaccgggaAaaaaacuggagu...................	1
seq_376673_x5   ......................................................................uAaccgggagaaaaacuggagu...................	1
seq_377465_x2   ......................................................................ucaccgggagaaaaacAggagu...................	1
seq_376863_x4   ......................................................................ucaccgggagaaaaacugUagu...................	1
seq_377214_x3   ......................................................................uNaccgggagaaaaacuggagu...................	1
seq_377391_x2   ......................................................................ucaccgggagaaaaacuggCgu...................	1
seq_320610_x1349......................................................................ucaccgggagaaaaacuggagu...................	0
seq_378162_x1   ......................................................................ucaccgggGgaaaaacuggagu...................	1
seq_377945_x1   ......................................................................ucaccgggagaCaaacuggagu...................	1
seq_378308_x1   ......................................................................ucaUcgggagaaaaacuggagu...................	1
seq_377725_x2   ......................................................................Ccaccgggagaaaaacuggagu...................	1
seq_378032_x1   ......................................................................ucaccgggagaaaUacuggagu...................	1
seq_376211_x7   ......................................................................ucaccgggUgaaaaacuggagu...................	1
seq_377906_x1   ......................................................................ucaccgggagaaaaacuggaUu...................	1
seq_378174_x1   ......................................................................ucaccgggagaaaaacuggGgu...................	1
seq_377339_x2   ......................................................................ucaccgggCgaaaaacuggagu...................	1
seq_374190_x17  ......................................................................ucaccgggagaaaaacuggagA...................	1
seq_376999_x4   ......................................................................ucaGcgggagaaaaacuggagu...................	1
seq_371854_x33  ......................................................................ucaccgggagaaaaacuggagC...................	1
seq_377739_x2   ......................................................................ucaccgggagaGaaacuggagu...................	1
seq_376963_x4   ......................................................................ucaccUggagaaaaacuggagu...................	1
seq_377960_x1   ......................................................................ucaccgggagaaaCacuggagu...................	1
seq_376718_x5   ......................................................................ucaccgggagaaaaacuggaCu...................	1
seq_378215_x1   ......................................................................ucaccgggagaaaaacugNagu...................	1
seq_377196_x3   ......................................................................ucacUgggagaaaaacuggagu...................	1
seq_378253_x1   ......................................................................ucaccgggagaaaaaGuggagu...................	1
seq_377481_x2   ......................................................................ucaccgggagaaaaCcuggagu...................	1
seq_377655_x2   ......................................................................ucaccgggagaaaaacNggagu...................	1
seq_377842_x1   ......................................................................ucaccgggagaaGaacuggagu...................	1
seq_377733_x2   ......................................................................ucaccgggagaaCaacuggagu...................	1
seq_376975_x4   ......................................................................ucaccgggagaaaaacuAgagu...................	1
seq_375739_x9   ......................................................................ucaccgggagaaaaaAuggagu...................	1
seq_378059_x1   ......................................................................ucaccgggagaUaaacuggagu...................	1
seq_376875_x4   ......................................................................ucaccgggagaaaaacuUgagu...................	1
seq_377567_x2   ......................................................................ucCccgggagaaaaacuggagu...................	1
seq_377208_x3   ......................................................................ucaccgggagaaaaacugAagu...................	1
seq_378085_x1   ......................................................................ucaccCggagaaaaacuggagu...................	1
seq_377379_x2   ......................................................................ucaccgggagaaaGacuggagu...................	1
seq_378242_x1   ......................................................................ucaccgggaUaaaaacuggagu...................	1
seq_378086_x1   ......................................................................ucaccAggagaaaaacuggagu...................	1
seq_378041_x1   ......................................................................ucaccgggagaaaaUcuggagu...................	1
seq_377901_x1   ......................................................................uGaccgggagaaaaacuggagu...................	1
seq_377719_x2   ......................................................................Gcaccgggagaaaaacuggagu...................	1
seq_378268_x1   ......................................................................ucaccgggaCaaaaacuggagu...................	1
seq_377453_x2   ......................................................................ucaccgAgagaaaaacuggagu...................	1
seq_373334_x22  ......................................................................ucaccgggagaaaaacugCagu...................	1
seq_375160_x12  ......................................................................ucaccgggagaaaaaUuggagu...................	1
seq_373422_x21  ......................................................................ucacAgggagaaaaacuggagu...................	1
seq_375112_x12  ......................................................................ucaccgggagaaaaacuggagG...................	1
cel-miR-38      ......................................................................ucaccgggagaaaaacuggagu...................	0
seq_376038_x8   ......................................................................ucaccgggagUaaaacuggagu...................	1
seq_377701_x2   ......................................................................uUaccgggagaaaaacuggagu...................	1
seq_376293_x6   ......................................................................ucaccgggagaaaaacGggagu...................	1
seq_377106_x3   ......................................................................ucaccgCgagaaaaacuggagu...................	1
seq_377695_x2   ......................................................................ucaccgggagaaaaacuggUgua..................	1
seq_377892_x1   ......................................................................ucaccgggagCaaaacuggagua..................	1
seq_378063_x1   ......................................................................ucaccgggagaaaaacuggagAa..................	1
seq_377013_x3   ......................................................................ucaccgggagaaaaacuggagCa..................	1
seq_378122_x1   ......................................................................uGaccgggagaaaaacuggagua..................	1
seq_378075_x1   ......................................................................ucaccgggagaaaaacuggaguG..................	1
seq_352252_x230 ......................................................................ucaccgggagaaaaacuggaguU..................	1
seq_373708_x20  ......................................................................ucaccgggagaaaaacuggagua..................	0
seq_374947_x13  ......................................................................ucaccgggagaaaaacuggaguaA.................	1
seq_378157_x1   ......................................................................ucaccgggagaaaaacuggaguUg.................	1
seq_377403_x2   .......................................................................caccgggagaaaaacuggagu...................	0
seq_377136_x3   ........................................................................accgggagaaaaacuggag....................	0
seq_378022_x1   ........................................................................accgggagaaaaacuggagC...................	1
seq_375395_x10  ........................................................................accgggagaaaaacuggagu...................	0
seq_378209_x1   ........................................................................accgggagaaaaacuggagA...................	1
seq_378318_x1   ........................................................................accgggagaaaaacugAagu...................	1
seq_378282_x1   ........................................................................accgggagGaaaacuggagu...................	1
seq_377867_x1   ........................................................................accgggagCaaaacuggagu...................	1
seq_377972_x1   ........................................................................accgggagaaaaacGggagu...................	1
seq_377673_x2   ........................................................................accgggagaaaaacuggaguU..................	1
seq_377872_x1   ..........................................................................cgggagaaaaacuggagu...................	0
seq_378055_x1   ..........................................................................cgggagaaaaacuggaguU..................	1



>chrII:11534525-11540624_19
score total		          84.4
score for star read(s)	           3.9
score for read counts	          77.6
score for mfe		           1.9
score for randfold	           1.6
score for cons. seed	          -0.6
total read count	           164
mature read count	            68
loop read count		             9
star read count		            87
exp             ffffffffffffffffffffffffffMMMMMMMMMMMMMMMMMMMMMMMlllllllllllllllllllllSSSSSSSSSSSSSSSSSSSSSSffffffffffffffffffff
obs             ffffffffffffffffffffffffffMMMMMMMMMMMMMMMMMMMMMMMlllllllllllllllllllllSSSSSSSSSSSSSSSSSSSSSSffffffffffffffffffff
pri_seq         auuuuuaagugggucccagagaccuuggugguuuuucucugcagugauagauacuucuaacaacucgcuaucaccgggugaaaaaucaccuaggucuggagccuccugcucu
pri_struct      .......((..((..(((..(((((.(((((((((((((((..(((((((.................))))))))))).))))))))))).))))))))..))..)).....	#MM
seq_378151_x1   ..........................ggugguuuuucucuUcaguga.................................................................	1
seq_377657_x2   ..........................ggugguuuuucucugcagugau................................................................	0
seq_378283_x1   ..........................ggGgguuuuucucugcagugaua...............................................................	1
seq_377938_x1   ..........................ggugguuuuucucugUagugaua...............................................................	1
seq_378266_x1   ..........................ggugguCuuucucugcagugaua...............................................................	1
seq_376959_x4   ..........................ggugguuuuucucuUcagugaua...............................................................	1
seq_377459_x2   ..........................ggugguuuuucucugcagugCua...............................................................	1
seq_377463_x2   ..........................ggugguuuuuUucugcagugaua...............................................................	1
seq_370580_x42  ..........................ggugguuuuucucugcagugaua...............................................................	0
seq_378066_x1   ..........................ggugguuuuucucugcagCgaua...............................................................	1
seq_378054_x1   ..........................ggugguuuuucucugcagugauU...............................................................	1
seq_377637_x2   ..........................ggugguuuuucucugcCgugaua...............................................................	1
seq_378131_x1   ..........................ggugguuuuucucugcagugauaU..............................................................	1
seq_378064_x1   ..........................ggugguuuuucucugcagugauag..............................................................	0
seq_378010_x1   ..........................ggugguuuuucuGugcagugauag..............................................................	1
seq_377371_x2   ..........................ggugguuuuucucugcagugauaAa.............................................................	1
seq_377953_x1   ............................ugguuuuucucugcagugaua...............................................................	0
seq_377801_x1   ............................ugguuuuucucugcagugUua...............................................................	1
seq_377854_x1   ............................ugguuuuucucugcagugauaga.............................................................	0
seq_375838_x9   .................................................gauacuucuaacaacucgcua..........................................	0
seq_377941_x1   ....................................................................uaucaccgggugaaaaaucaccu.....................	0
seq_378320_x1   .....................................................................aucaccgggugaaaaaucacAu.....................	1
seq_378280_x1   .....................................................................aucaccggguAaaaaaucaccu.....................	1
seq_376006_x8   .....................................................................aucaccgggugaaaaaucaccu.....................	0
seq_376879_x4   .....................................................................aucaccgggugaaaaaucaccuU....................	1
seq_375615_x10  .....................................................................aucaccgggugaaaaaucaccua....................	0
seq_378108_x1   .....................................................................aucaccgggGgaaaaaucaccua....................	1
seq_376851_x4   ......................................................................ucaccgggugaaaaaucaccu.....................	0
seq_377803_x1   ......................................................................ucaccgggugaaCaaucaccua....................	1
seq_378243_x1   ......................................................................ucaccgggugaaaGaucaccua....................	1
seq_378091_x1   ......................................................................ucaccgAgugaaaaaucaccua....................	1
seq_377871_x1   ......................................................................ucaccgggugaaaaauAaccua....................	1
seq_377853_x1   ......................................................................uAaccgggugaaaaaucaccua....................	1
seq_378138_x1   ......................................................................ucaccgggugCaaaaucaccua....................	1
seq_378123_x1   ......................................................................uUaccgggugaaaaaucaccua....................	1
seq_377052_x3   ......................................................................ucaccgggGgaaaaaucaccua....................	1
cel-miR-41      ......................................................................ucaccgggugaaaaaucaccua....................	0
seq_378249_x1   ......................................................................ucaccgggugaaaaaucaUcua....................	1
seq_372631_x27  ......................................................................ucaccgggugaaaaaucaccua....................	0
seq_377820_x1   ......................................................................ucaccAggugaaaaaucaccua....................	1
seq_377247_x3   ......................................................................ucaccgggugaaaaaucaccuaU...................	1
seq_377331_x2   ......................................................................ucaccgggugaaaaaucaccuaA...................	1
seq_377731_x2   .......................................................................caccgggugaaaaaucaccua....................	0
seq_377439_x2   .......................................................................caccgggugaaaaaucaccuaU...................	1
seq_377980_x1   ........................................................................accgggCgaaaaaucaccua....................	1
seq_376395_x6   ........................................................................accgggugaaaaaucaccua....................	0
seq_378083_x1   .........................................................................ccgggugaaaaaucaccua....................	0
seq_377991_x1   ..........................................................................cgggugaaaaaucaccua....................	0