Mercurial > repos > rnateam > paralyzer

comparison test-data/out.groups @ 0:4dbe81be8b81 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/paralyzer commit 52c43a8b9958fc46ab0284638038e690f5a0da3a
author rnateam
date Tue, 06 Dec 2016 03:28:59 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:4dbe81be8b81
1 Chromosome,Strand,GroupStart,GroupEnd,GroupID,GroupSequence,ReadCount,ConversionLocationCount,ConversionEventCount
2 chrM,+,578,611,G1,TTTATGTAGCTTACCTCCTCAAAGCAATACACTG,35,3,3
3 chrM,+,618,648,G2,TTTAGACGGGCTCACATCACCCCATAAACAA,16,0,0
4 chrM,+,654,686,G3,TTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAA,5,0,0
5 chrM,+,698,769,G4,CAAGCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATCAAAAGGAACAAGCATCAAGCACGCAG,108,1,2
6 chrM,+,787,817,G5,CTTAGCCTAGCCACACCCCCACGGGAAACAG,7,0,0
7 chrM,+,856,934,G6,AGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACCCAAGTCAATAGAAGCCGG,16,0,0
8 chrM,+,987,1057,G7,AGTTGTAAAAAACTCCAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACACAATAG,60,4,6
9 chrM,+,1080,1198,G8,ATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAACACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATCCCTCTAGA,51,1,2
10 chrM,+,1218,1275,G9,ATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATATACCGCCATCTTCAGCA,43,0,0
11 chrM,+,1286,1355,G10,AAGGCTACAAAGTAAGCGCAAGTACCCACGTAAAGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAG,11,0,0
12 chrM,+,1356,1476,G11,AAATGGGCTACATTTTCTACCCCAGAAAACTACGATAGCCCTTATGAAACTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTAAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCG,169,4,7
13 chrM,+,1477,1503,G12,TACACACCGCCCGTCACCCTCCTCAAG,10,0,0
14 chrM,+,1504,1569,G13,TATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACAAGTCGTAACATG,56,4,6
15 chrM,+,1578,1771,G14,ACTGGAAAGTGCACTTGGACGAACCAGAGTGTAGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCTGAGCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGC,99,2,2
16 chrM,+,1777,1873,G15,ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTAGAAATA,19,1,1
17 chrM,+,1878,1937,G16,TGCAAGGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAA,6,0,0
18 chrM,+,1959,1990,G17,CAAAATAGTGGGAAGATTTATAGGTAGAGGCG,5,0,0
19 chrM,+,1991,2019,G18,ACAAACCTACCGAGCCTGGTGATAGCTGG,5,0,0
20 chrM,+,2032,2108,G19,GAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGG,14,0,0
21 chrM,+,2109,2187,G20,AACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCC,11,0,0
22 chrM,+,2203,2306,G21,GTTCAAGCTCAACACCCACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTGGACCAATCTATCACCCTATAGAAGAACTAATGTTAGTA,29,1,2
23 chrM,+,2323,2461,G22,ATTCTCCTCCGCATAAGCCTGCGTCAGATTAAAACACTGAACTGACAATTAACAGCCCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTTAAAAA,52,2,2
24 chrM,+,2497,2527,G23,TTTACCAAAAACATCACCTCTAGCATCACCA,5,1,1
25 chrM,+,2644,2684,G24,AGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACC,8,1,1
26 chrM,+,2778,2923,G25,TCCTAAACTACCAAACCTGCATTAAAAATTTCGGTTGGGGCGACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAG,16,1,1
27 chrM,+,2944,3052,G26,CAATCCTATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAA,20,1,1
28 chrM,+,3110,3277,G27,CAAATTCCTCCCTGTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATCATCTCAACTTAGTATTATACCCACACCCACCCAAGAACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACAG,84,3,64
29 chrM,+,3636,3670,G28,CCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAG,6,2,2
30 chrM,+,3671,3698,G29,CATCAAACTCAAACTACGCCCTGATCGG,6,0,0
31 chrM,+,3746,3776,G30,CCATCATTCTACTATCAACATTACTAATAAG,9,0,0
32 chrM,+,4293,4330,G31,ATAGAGTAAATAATAGGAGCTTAAACCCCCTTATTTCT,8,1,1
33 chrM,+,4402,4463,G32,AGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTATACCCTTCCC,25,0,0
34 chrM,+,4687,4715,G33,CTATCCTCTTCAACAATATACTCTCCGGA,10,2,2
35 chrM,+,5055,5093,G34,TACAACCCTAACATAACCATTCTTAATTTAACTATTTAT,5,1,2
36 chrM,+,5113,5140,G35,CATTCCTACTACTCAACTTAAACTCCAG,6,0,0
37 chrM,+,6250,6276,G36,CTATAGTGGAGGCCGGAGCAGGAACAG,6,1,1
38 chrM,+,6334,6360,G37,ACCTAACCATCTTCTCCTTACACCTAG,10,1,3
39 chrM,+,6478,6505,G38,CAGTCCTACTTCTCCTATCTCTCCCAGT,12,0,0
40 chrM,+,6518,6564,G39,CATCACTATACTACTAACAGACCGCAACCTCAACACCACCTTCTTCG,7,1,1
41 chrM,+,8295,8364,G40,CACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGAACCAACACCTCTTTACAGTGA,10,1,1
42 chrM,+,8365,8387,G41,AATGCCCCAACTAAATACTACCG,5,1,1
43 chrM,+,8670,8719,G42,ACTAATCAAACTAACCTCAAAACAAATGATAACCATACACAACACTAAAG,23,2,2
44 chrM,+,9991,10048,G43,ACTCTTTTAGTATAAATAGTACCGTTAACTTCCAATTAACTAGTTTTGACAACATTCA,14,1,1
45 chrM,+,10099,10126,G44,CCTTACTACTAATAATTATTACATTTTG,20,9,18
46 chrM,+,10234,10254,G45,CTATTACCTTCTTATTATTTG,15,6,13
47 chrM,+,10291,10318,G46,CCCTACAAACAACTAACCTGCCACTAAT,5,0,0
48 chrM,+,10405,10467,G47,TGGTATATAGTTTAAACAAAACGAATGATTTCGACTCATTAAATTATGATAATCATATTTACC,10,0,0
49 chrM,+,10538,10564,G48,CTCACACCTCATATCCTCCCTACTATG,11,0,0
50 chrM,+,10696,10730,G49,CCCTACTAGTCTCAATCTCCAACACATATGGCCTA,6,1,2
51 chrM,+,10972,10993,G50,ACTCCTACCCCTCACAATCATG,9,1,1
52 chrM,+,11193,11222,G51,CAGGCACATACTTCCTATTCTACACCCTAG,5,0,0
53 chrM,+,11378,11425,G52,ATACCTCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGAA,7,1,1
54 chrM,+,11643,11679,G53,CCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTG,10,1,1
55 chrM,+,11800,11825,G54,ACTTCAAACTCTACTCCCACTAATAG,17,2,4
56 chrM,+,12138,12242,G55,GTAAATATAGTTTAACCAAAACATCAGATTGTGAATCTGACAACAGAGGCTTACGACCCCTTATTTACCGAGAAAGCTCACAAGAACTGCTAACTCATGCCCCCA,47,0,0
57 chrM,+,12266,12325,G56,ACTTTTAAAGGATAACAGCTATCCATTGGTCTTAGGCCCCAAAAATTTTGGTGCAACTCC,19,0,0
58 chrM,+,12584,12610,G57,ACTACTTCTCCATAATATTCATCCCTG,7,0,0
59 chrM,+,12900,12923,G58,ATTTATCCTACACTCCAACTCATG,5,1,1
60 chrM,+,13146,13172,G59,CCCACTAATCCAAACTCTAACACTATG,14,0,0
61 chrM,+,14839,14865,G60,AAACTTCGGCTCACTCCTTGGCGCCTG,7,1,1
62 chrM,+,15624,15650,G61,CCCTATTACTATCCATCCTCATCCTAG,11,2,2
63 chrM,+,15919,15954,G62,TGTAAACCGGAGATGAAAACCTTTTTCCAAGGACAA,16,1,1
64 chrM,-,4328,4364,G63,GATTCTCAGGGATGGGTTCGATTCTCATAGTCCTAGA,10,0,0
65 chrM,-,4365,4400,G64,TAGGATGGGGTGTGATAGGTGGCACGGAGAATTTTG,20,0,0
66 chrM,-,5585,5655,G65,AAGGGCTTAGCTTAATTAAAGTGGCTGATTTGCGTTCAGTTGATGCAGAGTGGGGTTTTGCAGTCCTTAGC,12,0,0
67 chrM,-,5656,5695,G66,TTAACTAAGTGTTTGTGGGTTTAAGTCCCATTGGTCTAGT,15,2,3
68 chrM,-,5756,5789,G67,AAGAAGCAGCTTCAAACCTGCCGGGGCTTCTCCC,6,0,0
69 chrM,-,5795,5853,G68,AAGACAGGGGTTAGGCCTCTTTTTACCAGCTCCGAGGTGATTTTCATATTGAATTGCAA,9,0,0
70 chrM,-,7451,7514,G69,GAAAAAGTCATGGAGGCCATGGGGTTGGCTTGAAACCAGCTTTGGGGGGTTCGATTCCTTCCTT,25,2,2
71 chrM,-,14671,14729,G70,AAATACAACGATGGTTTTTCATATCATTGGTCGTGGTTGTAGTCCGTGCGAGAATAATG,17,2,5