Mercurial > repos > rnateam > rcas

diff readme.rst @ 1:7c7a2a381dfe draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rcas/ commit 5c6486dead878a8c9521e1d6d50b3a537a2ec2b0
author rnateam
date Thu, 21 Jun 2018 15:07:13 -0400
parents aa9579837a2e
children
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--- a/readme.rst	Thu Apr 13 12:36:05 2017 -0400
+++ b/readme.rst	Thu Jun 21 15:07:13 2018 -0400
@@ -3,14 +3,18 @@
 
 - the dependencies of the tool are handled by the conda dependency resolver
 
-- to install the dependencies, the galaxy administrator needs to configure to ensure the conda channels - bioconda, r, conda-forge, defaults
+- to install the dependencies, the galaxy administrator needs to enable the conda channels - bioconda, r, conda-forge, defaults
 
 - by default, the conda installation includes hg19
 
-- to enable analysis for mm9, ce10, dm3, the administrator needs to separately install the relevant packages from the channel bioconda
+- to enable analysis for hg38, mm9, mm10, ce10, or dm3, the administrator needs to separately install the relevant packages from the bioconda channel
+
+    - bioconductor-bsgenome.hsapiens.ucsc.hg38
+    - bioconductor-bsgenome.mmusculus.ucsc.mm9
+    - bioconductor-bsgenome.mmusculus.ucsc.mm10
+    - bioconductor-bsgenome.celegans.ucsc.ce10
     - bioconductor-bsgenome.dmelanogaster.ucsc.dm3
-    - bioconductor-bsgenome.celegans.ucsc.ce10
-    - bioconductor-bsgenome.mmusculus.ucsc.mm9
     - bioconductor-org.mm.eg.db
     - bioconductor-org.ce.eg.db
     - bioconductor-org.dm.eg.db
+