Mercurial > repos > rnateam > remurna
view create_input_file.py @ 0:b1f5d49a6f30 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/remurna commit 6e51a331dbeab2786d8df5fd379ae3a63eb61d83
author | rnateam |
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date | Tue, 13 Dec 2016 12:32:11 -0500 |
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import sys import os wild_fa = sys.argv[1] snp_tags = sys.argv[2] outfile = sys.argv[3] # Write RNA sequence and SNP tags to a outfile out = open(outfile,'w') with open (wild_fa) as in_fa_handle: for line in in_fa_handle: out.write(line) with open (snp_tags) as in_snp_handle: out.write('*'+in_snp_handle.readline()) out.close()