Mercurial > repos > rnateam > ribotaper
diff ribotaper_part1_create_annotation_files.xml @ 1:a56343c142d5 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/ribotaper/ commit 8e6fdb45c70ba778280df5b222036f3b5c604cdf
author | rnateam |
---|---|
date | Tue, 29 Nov 2016 14:33:00 -0500 |
parents | 93b90466d533 |
children | 9dda0cc9ff98 |
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--- a/ribotaper_part1_create_annotation_files.xml Tue Jun 07 17:49:46 2016 -0400 +++ b/ribotaper_part1_create_annotation_files.xml Tue Nov 29 14:33:00 2016 -0500 @@ -1,6 +1,6 @@ <tool id="ribotaper_create_annotation" name="ribotaper part 1: creation of annotation files" version="0.1.0"> <requirements> - <requirement type="package" version="1.3.1">ribotaper</requirement> + <requirement type="package" version="1.3.1a">ribotaper</requirement> </requirements> <stdio> <exit_code range="1:" /> @@ -13,9 +13,7 @@ "$ccdsid" "$appris" "annotation_path" - && - tar "czvf" "$output2" @@ -37,7 +35,7 @@ </inputs> <outputs> <data name="output1" type="data" format="bed" from_work_dir="annotation_path/start_stops_FAR.bed" label="start_stops_FAR"/> - <data name="output2" type="data" format="compressed_archive" label="annotation_path"/> + <data name="output2" type="data" format="zip" label="annotation_path"/> </outputs> <tests> <test> @@ -81,12 +79,14 @@ ``Ribotaper part 1`` generates two files: - **start_stops_FAR** in BED format - - **annotation_path** in format of compressed archive + - **annotation_path** in format of zip *Start_stops_FAR* is used as an input for ``ribotaper part 2``. *Annotation_path* is used as an input for ``ribotaper part 3``. + + ]]></help> <citations> <citation type="doi">10.1038/nmeth.3688</citation>