annotate test-data/chr1.fa @ 3:039547ad8fb8 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
author rnateam
date Fri, 16 Dec 2016 07:37:24 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
3
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
1 >TestChromosomeForGalaxy
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
2 CACTGAATTGACCCTTGGCAATGGTCTGTTCCCGCACCCAACACCTGGCTCCACTACGTT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
3 GAAACACACACACACACACACACACACACACACACACACACACACACACGTGATATTTGC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
4 TTTTAAGATCATAAAACACCAGGAAGGAGACAAAAGCTCTTATGCGTCATCTGAGATGAC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
5 ACATGTACTGTTAAAGCGTGCGTTTATTTCAAACATTAATGAAATTTGCAGAACCCAAAC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
6 TAAAGAGAGAGGATAGATAAGACATGCTGCAGTTCTTGCCCTAACTTTCAATCCCAACAA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
7 CTGAAATGTCTTCCAGAGAAGTAACTCCCCCCGGTAAGGATGTAGCGCGGTCCCTACGTG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
8 GGTCTAAGGGATCTGACCCACGACGCACTGCACTGGGTTCACGAAGCGCCTCCTCGCAGG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
9 CGGTTATCTCGGTATCTCTGAGAGCGGCGGGCTCTCGCTCCCGCTCCAGGGATTCGGGGC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
10 AGAAAGAGAACATCCCACAGTTGGCGGGAGTTACGCAAGACAGTCAGACCCGGACGTCAC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
11 TCGTGAGTGCCCCGACCCCCCTCCACCCCAGAGGCGGGGCCATCGCCTTCCTTCCGAACT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
12 CGGGATCGATCTGGAGCTCCGGGAATTTCCCTGGCCCGGGACTCCGGGCTTTCCAGCCCC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
13 AACCATGCATAAAAGGGGTTCGCCGTTCTCGGAGAGCCACAGAGCCCGGGCCACAGGCAG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
14 CTCCTTGCCAGCTCTCCTCCTCGCACAGCCGCTCGAACCGCCTGCTGAGCCCCATGGCCC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
15 GCGCCACGCTCTCCGCCGCCCCCAGCAATCCCCGGCTCCTGCGGGTGGCGCTGCTGCTCC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
16 TGCTCCTGGTGGCCGCCAGCCGGCGCGCAGCAGGTGGGTCCCGGCGCCCTGGGGTCCCCG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
17 GGCCGGACGCGGCTGGGGTGGGCGCCCCGCGCCGACAGCCCCGCTCAATCAGCGAGTCTC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
18 TTCTTCCCTAGGAGCGCCCCTGGCCACTGAACTGCGCTGCCAGTGCTTGCAGACCCTGCA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
19 GGGAATTCACCTCAAGAACATCCAAAGTGTGAAGGTGAAGTCCCCCGGACCCCACTGCGC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
20 CCAAACCGAAGTCATGTAAGTCTCGCCCATCGCTGCCGCTGCCACTGCTGGGGTCCCCGA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
21 CTCTCCCGCTGCCCCAAACCCTGTCCTCAGCCCGACCTCCTGTCTCACGAGATTCCCTTC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
22 TCTCTGCAGAGCCACACTCAAGAATGGGCAGAAAGCTTGTCTCAACCCCGCATCGCCCAT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
23 GGTTAAGAAAATCATCGAAAAGATGCTGAAAAAGTAAGTTATAATTTCCATGTACACAGG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
24 CGACTGGAGCTGTTGGTCAGAAATACTGGCGTCTGCCCCCTAAAAAGTAAATCAGGAAAA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
25 CCCAGGGTTAGCTGCAGGACTGAAAAAATTATTATTTTCACAAAGTTGCCATTAAGGTTA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
26 TTAATCTGTTCTGGTGCCAGAGGATATTCCCAGTGCCCAGGGTCACCACCCAGGTTCTTC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
27 CCTCCTGCCAGTGAATGTAGGTAAAACTGCTTTCATGTAAGGTCTCATTGGAGTTTGCCA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
28 GTTGTGCTGAAGTGTTTTCCACCTGTTAAAAAACACAAGCTTCATTTCCCCTAGTTCCTA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
29 CTGACTTTCAGACCTGAAAAGCAGACCCCCTGGTTTTTTGTAAAAGTTTAGGGTTGAAGT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
30 GCAGAGATTTCACAATAATATTGCACTGGGTATATAACTGGTTGCCACCACCTATTAGCC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
31 ATGTCACTCAGAGACAATATTATTTAGTTTATCTGAGACTCAGCAAAACAGGGAAAATAA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
32 TGGTAGCTACATCATGAGGTTGCTTTGAGGCTCAAGTGAGGCCCAGTATGACAAAGAGCA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
33 ATAGGCTCTGGCTGTTTTAGCCAGTAAAACAGTGTAGACTGCCACTCCTCCACCCCACGT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
34 CACCCCCATTCCTAAAAGAGCATCCCAAGCCTAGAGGTCCTTGCCACACAGCACAGCTGT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
35 CACAGGCAGTACCCACTTGGGTGCCAGGCTGGGGAAACTGCATTCAGAAAACTCTAGAGC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
36 CTGGGGAAACAGGACAGGAGAAGACTGTTGTGCAGTCAGCTTTCCTGAGCACCTACTCAG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
37 GGCACCCATTTTCTCATTACAGTGGCAAATCCAACTGACCAGAAGGAAGGAGGAAGCTTA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
38 TTGGTGGCTGTTCCTGAAGGAGGCCCTGCCCTTACAGGAACAGAAGAGGAAAGAGAGACA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
39 CAGCTGCAGAGGCCACCTGGATTGCGCCTAATGTGTTTGAGCATCACTTAGGAGAAGTCT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
40 TCTATTTATTTATTTATTTATTTATTTGTTTGTTTTAGAAGATTCTATGTTAATATTTTA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
41 TGTGTAAAATAAGGTTATGATTGAATCTACTTGCACACTCTCCCATTATATTTATTGTTT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
42 ATTTTAGGTCAAACCCAAGTTAGTTCAATCCTGATTCATATTTAATTTGAAGATAGAAGG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
43 TTTGCAGATATTCTCTAGTCATTTGTTAATATTTCTTCGTGATGACATATCACATGTCAG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
44 CCACTGTGATAGAGGCTGAGGAATCCAAGAAAATGGCCAGTGAGATCAATGTGACGGCAG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
45 GGAAATGTATGTGTGTCTATTTTGTAACTGTAAAGATGAATGTCAGTTGTTATTTATTGA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
46 AATGATTTCACAGTGTGTGGTCAACATTTCTCATGTTGAAGCTTTAAGAACTAAAATGTT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
47 CTAAATATCCCTTGGACATTTTATGTCTTTCTTGTAAGGCATACTGCCTTGTTTAATGTT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
48 AATTATGCAGTGTTTCCCTCTGTGTTAGAGCAGAGAGGTTTCGATATTTATTGATGTTTT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
49 CACAAAGAACAGGAAAATAAAATATTTAAAAATATAAAATGTTTGTTTTATTTTGGGGGA
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
50 AACAAGGACTATATTTGCTGAAAAATCTGATGATTTACATCAATATTTATTTCTCAATTT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
51 TTTTCTGGGTTTTCAATCTGCTATACAGATAAACTATGAATTATGCCTAATTTCATGTGG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
52 TGATTGCTGTCACTCCCCTTGGCTCTCACCTAGTAAAGAATGTGCCTTACCAAACTATGG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
53 TCTTGCCCCTGATGGGAGAATCACTGATACATATTGCCATTTTTACAAGAAGTTCCTTAC
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
54 TACCTTGCTACTCAAATTTACCTCCTTAAAAATATGGAGGGGGGAAATATGGCAGAGACG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
55 TTTTAACCAGAGCAACTCCATCTTGAATAGGGGCTAGGCAAAATGGGGCTGAGGTTTACT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
56 GGGCTGGGCTGCATTCCCAGTAGGTTAGGCATTCGAAGTCACAGGATGAGATAGGAGATT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
57 GGCACAAGATACAGGTCATAAAGACCTTGCTGATAAAACAGGTTACAGTAAAGAAGCCAG
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
58 CTAAAACCCACCAAAGCCAAGATGGAGACGAGAGTGACCTCTGTCGTTCTCACTCGTCAT
039547ad8fb8 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/segemehl commit 21aaee40723b5341b4236edeb0e72995c2054053
rnateam
parents:
diff changeset
59 TATACACTAATTATAATATATTAGCATGCTAAAAGACAC