Mercurial > repos > rnateam > selectsequencesfrommsa

comparison selectsequencesfrommsa.xml @ 1:876c70c6ecad draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/selectsequencesfrommsa commit 3f736a6e9040a880a887c89271c9a8d5ac4c0c83-dirty
author rnateam
date Fri, 08 Feb 2019 14:53:45 -0500
parents 48fc2c21fe1c
children
comparison
equal deleted inserted replaced
0:48fc2c21fe1c 1:876c70c6ecad
1 <tool id="selectsequencesfrommsa" name="Select Sequences" version="1.0.2"> 1 <tool id="selectsequencesfrommsa" name="Select Sequences" version="1.0.5">
2 <description> 2 <description>
3 Tool to select representative sequences from a multiple sequence alignment. 3 Tool to select representative sequences from a multiple sequence alignment.
4 </description> 4 </description>
5 <requirements> 5 <requirements>
6 <requirement type="package" version="1.0.2">selectsequencesfrommsa</requirement> 6 <requirement type="package" version="1.0.5">selectsequencesfrommsa</requirement>
7 </requirements> 7 </requirements>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 SelectSequencesFromMSA 9 SelectSequencesFromMSA
10 -c '$input_clustal' 10 -c '$input_clustal'
11 $x 11 $x
12 -o `pwd` 12 -o `pwd`
13 -n $n 13 -n $n
14 -i $i 14 -i $i
15 -m $m 15 -m $m
16 -f result.selected
16 > warnings 17 > warnings
17 ]]> 18 ]]>
18 </command> 19 </command>
19 <inputs> 20 <inputs>
20 <param name="input_clustal" type="data" format="clustal" label="Input clustal alignment"/> 21 <param name="input_clustal" type="data" format="clustal" label="Input clustal alignment"/>
27 <data format="clustal" name="clustal" from_work_dir="result.selected" label="Clustal alignment of selected sequences"/> 28 <data format="clustal" name="clustal" from_work_dir="result.selected" label="Clustal alignment of selected sequences"/>
28 </outputs> 29 </outputs>
29 <tests> 30 <tests>
30 <test> 31 <test>
31 <param name="input_clustal" value="result.clustal"/> 32 <param name="input_clustal" value="result.clustal"/>
32 <output name="result.selected" file="result.selected"/> 33 <output name="clustal" file="result.selected"/>
33 </test> 34 </test>
34 </tests> 35 </tests>
35 <help> 36 <help>
36 37
37 <![CDATA[ 38 <![CDATA[