Mercurial > repos > rnateam > sortmerna

comparison tool_dependencies.xml @ 1:b482293b2987 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/sortmerna commit 844d980a7de5f199487ca9591420a23df63c5246-dirty
author iuc
date Wed, 05 Aug 2015 02:50:43 -0400
parents a8ac09e937f3
children 3699b6b771e0
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0:a8ac09e937f3 1:b482293b2987
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="sortmerna" version="1.9"> 3 <package name="sortmerna" version="2.0">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">http://bioinfo.lifl.fr/RNA/sortmerna/code/sortmerna-1.9.tar.gz</action> 6 <action type="download_by_url" target_filename="sortmerna-2.0.tar.gz">https://github.com/biocore/sortmerna/archive/2.0.tar.gz</action>
7 <action type="autoconf"/> 7 <action type="autoconf"/>
8 <action type="set_environment"> 8 <action type="set_environment">
9 <environment_variable name="SORTMERNADIR" action="set_to">$INSTALL_DIR</environment_variable> 9 <environment_variable name="SORTMERNADIR" action="set_to">$INSTALL_DIR</environment_variable>
10 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> 10 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
11 </action> 11 </action>