Mercurial > repos > rreumerman > snptools
comparison gbk_to_fasta.xml @ 4:bd5692103d5b draft
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| author | rreumerman |
|---|---|
| date | Fri, 05 Apr 2013 05:00:40 -0400 |
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| 3:a808647d7312 | 4:bd5692103d5b |
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| 1 <tool id="gbk2fasta" name="Genbank-to-Fasta"> | |
| 2 | |
| 3 <description>produces a Fasta file from a genbank file</description> | |
| 4 | |
| 5 <command interpreter="python">gbk_to_fasta.py $input $output</command> | |
| 6 | |
| 7 <inputs> | |
| 8 | |
| 9 <param name="input" type="data" format="text" label="Genbank file" /> | |
| 10 | |
| 11 </inputs> | |
| 12 | |
| 13 <outputs> | |
| 14 | |
| 15 <data name="output" format="fasta" label="${tool.name} on ${on_string}: converted Genbank file" /> | |
| 16 | |
| 17 </outputs> | |
| 18 | |
| 19 <help> | |
| 20 | |
| 21 This tool produces a fasta file from a genbank file containing a sequence. | |
| 22 | |
| 23 </help> | |
| 24 | |
| 25 </tool> |