Mercurial > repos > s-kaufmann > synteny_mapper

comparison tool_dependencies.xml @ 23:37f25cf20a52 draft

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author s-kaufmann
date Fri, 15 Aug 2014 12:08:40 -0400
parents 9914e0ec5a31
children ac899d2c696a
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22:9914e0ec5a31 23:37f25cf20a52
27 Downloads and installs Circos (v.0.64) for use in visualization. Requires perl to be installed. 27 Downloads and installs Circos (v.0.64) for use in visualization. Requires perl to be installed.
28 </readme> 28 </readme>
29 </package> 29 </package>
30 30
31 <set_environment version="1.0"> 31 <set_environment version="1.0">
32 <environment_variable name="R_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> 32 <environment_variable name="R_PATH" action="set_to">$INSTALL_DIR/lib/</environment_variable>
33 </set_environment> 33 </set_environment>
34 34
35 <package name="libpng" version="1.6.7">
36 <repository changeset_revision="51f77dcf27bd" name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
37 </package>
35 <package name="R_3_0_2" version="3.0.2"> 38 <package name="R_3_0_2" version="3.0.2">
36 <install version="1.0"> 39 <install version="1.0">
37 <actions> 40 <actions>
38 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.2.tar.gz</action> 41 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.2.tar.gz</action>
39 <action type="set_environment_for_install"> 42 <action type="set_environment_for_install">