Mercurial > repos > s-kaufmann > synteny_mapper

comparison tool_dependencies.xml @ 2:67eb55a9debe draft

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author s-kaufmann
date Mon, 10 Feb 2014 09:06:15 -0500
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children a6c5e5a41025
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1:7601ef706058 2:67eb55a9debe
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <set_environment version="1.0">
4 <environment_variable name="JAR_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
5 </set_environment>
6
7 <set_environment version="1.0">
8 <environment_variable name="CIRCOS_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
9 </set_environment>
10
11 <package name="circos" version="0.64">
12 <install version="1.0">
13 <actions>
14 <!-- Downloads the Circos software from its website and unpacks it -->
15 <action type="download_by_url">http://circos.ca/distribution/circos-0.64.tgz </action>
16 <action type="move_directory_files">
17 <source_directory>.</source_directory>
18 <destination_directory>$INSTALL_DIR/</destination_directory>
19 </action>
20 <action type="set_environment">
21 <environment_variable name="CIRCOS_PATH" action="set_to">$INSTALL_DIR</environment_variable>
22 </action>
23 </actions>
24 </install>
25 <readme>
26 Downloads and installs Circos (v.0.64) for use in visualization. Requires perl to be installed.
27 </readme>
28 </package>
29
30 </tool_dependency>