Mercurial > repos > s-kaufmann > synteny_mapper

comparison synteny-mapper.xml @ 3:d8da7251bacf draft

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author s-kaufmann
date Mon, 10 Feb 2014 11:20:24 -0500
parents 67eb55a9debe
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2:67eb55a9debe 3:d8da7251bacf
224 <data format="tabular" name="out_file2" label="Refined Synteny regions"/> 224 <data format="tabular" name="out_file2" label="Refined Synteny regions"/>
225 </outputs> 225 </outputs>
226 <tests> 226 <tests>
227 <test> 227 <test>
228 <param name="inputSyntenyRegions" value="hom_sapi-mus_musc-synteny-v70"/> 228 <param name="inputSyntenyRegions" value="hom_sapi-mus_musc-synteny-v70"/>
229 <param name="inputHomologousGenes" value="hom_sapi-mus_musc-homologs-v70"/> 229 <param name="inputHomologousGenes" value="hom_sapi-mus_musc-orthologs-v70.filtered"/>
230 <param name="species1" value="homo_sapiens"/> 230 <param name="species1" value="homo_sapiens"/>
231 <param name="species2" value="mus_musculus"/> 231 <param name="species2" value="mus_musculus"/>
232 <param name="filter" value="true"/> 232 <param name="filter" value="true"/>
233 <!--<param name="header_lines" value="0"/>--> 233 <!--<param name="header_lines" value="0"/>-->
234 <output name="out_file1" file="mapping_test1.bed"/> 234 <output name="out_file1" file="Gene_mapping1.out"/>
235 <output name="out_file2" file="regions_test1.bed"/> 235 <output name="out_file2" file="Refined_Synteny_regions2.out"/>
236 </test> 236 </test>
237 </tests> 237 </tests>
238 238
239 <help> 239 <help>
240 240