Mercurial > repos > s-kaufmann > synteny_mapper
diff circos.conf @ 10:a6c5e5a41025 draft
Uploaded
author | s-kaufmann |
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date | Fri, 15 Aug 2014 08:35:52 -0400 |
parents | 8a4190457eb7 |
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--- a/circos.conf Wed Jul 30 08:23:49 2014 -0400 +++ b/circos.conf Fri Aug 15 08:35:52 2014 -0400 @@ -1,7 +1,7 @@ <image> png = yes -dir = /home/steffi/Software/galaxy-dist/database/job_working_directory/000/105/dataset_164_files -file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_164.dat.png +dir = /home/steffi/Software/galaxy-dist/database/job_working_directory/000/117/dataset_187_files +file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_187.dat.png radius = 750p background=white image_map_use = yes @@ -10,18 +10,18 @@ auto_alpha_colors = yes auto_alpha_steps = 5 </image> -karyotype = /home/steffi/Software/galaxy-dist/database/files/000/dataset_162.dat.karyotype +karyotype = /home/steffi/Software/galaxy-dist/database/files/000/dataset_185.dat.karyotype chromosomes_units = 1000000 chromosomes_display_default = no <colors> -<<include /home/steffi/Software/shed_tools/toolshed.g2.bx.psu.edu/repos/s-kaufmann/synteny_mapper/67eb55a9debe/synteny_mapper/circos-files/colors.synteny.conf>> -<<include /home/steffi/Software/shed_tools/toolshed.g2.bx.psu.edu/repos/s-kaufmann/synteny_mapper/67eb55a9debe/synteny_mapper/circos-files/colors.mouse.conf>> +<<include /home/steffi/Software/shed_tools/toolshed.g2.bx.psu.edu/repos/s-kaufmann/synteny_mapper/5d6d452a8e0b/synteny_mapper/circos-files/colors.synteny.conf>> +<<include /home/steffi/Software/shed_tools/toolshed.g2.bx.psu.edu/repos/s-kaufmann/synteny_mapper/5d6d452a8e0b/synteny_mapper/circos-files/colors.mouse.conf>> </colors> chromosomes = hs44454;mm44454 <highlights> z = 5 <highlight> -file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_161.dat.gene-track +file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_186.dat.gene-track r0 = 0.9r r1 = 0.99r stroke_thickness = 1 @@ -32,7 +32,7 @@ <plot> type=text color=black -file=/home/steffi/Software/galaxy-dist/database/files/000/dataset_161.dat.gene-track-labels +file=/home/steffi/Software/galaxy-dist/database/files/000/dataset_186.dat.gene-track-labels r0=0.99r r1=1.5r label_size=9 @@ -48,7 +48,7 @@ </plots> <links> <link> -file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_161.dat.links +file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_186.dat.links radius = 0.88r bezier_radius = 0r color = link_a4 @@ -78,7 +78,7 @@ </rules> </link> <link> -file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_161.dat.jumped +file = /home/steffi/Software/galaxy-dist/database/files/000/dataset_186.dat.jumped radius = 0.88r bezier_radius = 0r color = link_jumped_a4 @@ -108,4 +108,4 @@ </rules> </link> </links> -<<include /home/steffi/Software/shed_tools/toolshed.g2.bx.psu.edu/repos/s-kaufmann/synteny_mapper/67eb55a9debe/synteny_mapper/circos-files/synteny-region-default.conf>> +<<include /home/steffi/Software/shed_tools/toolshed.g2.bx.psu.edu/repos/s-kaufmann/synteny_mapper/5d6d452a8e0b/synteny_mapper/circos-files/synteny-region-default.conf>>